S000028864 telomeric_repeat TEL01L-TR chromosome 1 1 62 1 C 2003-09-09 2003-09-09 Terminal stretch of telomeric repeats on the left arm of Chromosome I
S000002143 ORF Dubious YAL069W chromosome 1 1 335 649 W 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000031098 CDS YAL069W 1 335 649 W 1996-07-31 1996-07-31
S000028866 X_element_combinatorial_repeats TEL01L-XR chromosome 1 1 336 63 C 2003-09-09 2003-09-09 Telomeric X element combinatorial Repeat region on the left arm of Chromosome I; contains repeats of the D, C, B and A types, as well as Tbf1p binding sites; formerly called SubTelomeric Repeats
S000028594 ORF Dubious YAL068W-A chromosome 1 1 538 792 W 2003-07-29 2003-07-29 Dubious open reading frame unlikely to encode a protein; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching
S000031372 CDS YAL068W-A 1 538 792 W 2003-07-29 2003-07-29
S000121252 ARS ARS102 ARSI-1 chromosome 1 1 650 1791 2007-03-07 2007-03-07 Autonomously Replicating Sequence
S000028865 X_element_core_sequence TEL01L-XC chromosome 1 1 801 337 C 2003-09-09 2003-09-09 Telomeric X element Core sequence on the left arm of Chromosome I; contains an ARS consensus sequence, an Abf1p binding site consensus sequence and two small overlapping ORFs (YAL068W-A and YAL069W)
S000034593 ARS consensus sequence TEL01L-XC 1 763 753 C 2003-09-09 2003-09-09
S000034594 binding_site TEL01L-XC 1 544 532 C 2003-09-09 2003-09-09
S000028862 telomere TEL01L chromosome 1 1 801 1 C -64 2003-09-09 2003-09-09 Telomeric region on the left arm of Chromosome I; composed of an X element core sequence, X element combinatorial repeats, and a short terminal stretch of telomeric repeats
S000002142 ORF Verified YAL068C PAU8 chromosome 1 1 2169 1807 C 1996-07-31 1996-07-31 Protein of unknown function, member of the seripauperin multigene family encoded mainly in subtelomeric regions
S000030944 CDS YAL068C 1 2169 1807 C 1996-07-31 1996-07-31
S000028593 ORF Uncharacterized YAL067W-A chromosome 1 1 2480 2707 W 2003-07-29 2003-07-29 Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching
S000031368 CDS YAL067W-A 1 2480 2707 W 2003-07-29 2003-07-29
S000121253 ARS ARS103 ARSI-8 chromosome 1 1 7998 8548 2007-03-07 2007-03-07 Autonomously Replicating Sequence
S000000062 ORF Verified YAL067C SEO1 chromosome 1 L000003363 1 9017 7236 C 1996-07-31 1996-07-31 Putative permease, member of the allantoate transporter subfamily of the major facilitator superfamily; mutation confers resistance to ethionine sulfoxide
S000029932 CDS YAL067C 1 9017 7236 C 1996-07-31 1996-07-31
S000000061 ORF Dubious YAL066W chromosome 1 1 10092 10400 W 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000029887 CDS YAL066W 1 10092 10400 W 1996-07-31 1996-07-31
S000001817 ORF Uncharacterized YAL065C chromosome 1 1 11952 11566 C 1996-07-31 1996-07-31 Putative protein of unknown function; has homology to FLO1; possible pseudogene
S000037154 CDS YAL065C 1 11952 11566 C 1996-07-31 1996-07-31
S000002141 ORF Uncharacterized YAL064W-B chromosome 1 1 12047 12427 W 1999-07-17 1999-07-17 Fungal-specific protein of unknown function
S000034793 CDS YAL064W-B 1 12047 12427 W 1999-07-17 1999-07-17
S000002140 ORF Uncharacterized YAL064C-A YAL065C-A chromosome 1 1 13744 13364 C 1996-07-31 1996-07-31 Putative protein of unknown function; YAL064C-A is not an essential gene
S000031541 CDS YAL064C-A 1 13744 13364 C 1996-07-31 1996-07-31
S000000060 ORF Verified YAL064W chromosome 1 1 21526 21852 W 1996-07-31 1996-07-31 Protein of unknown function; may interact with ribosomes, based on co-purification experiments
S000037087 CDS YAL064W 1 21526 21852 W 1996-07-31 1996-07-31
S000006787 long_terminal_repeat YALWdelta1 chromosome 1 1 22232 22554 W 2000-05-19 2000-05-19 Ty1 LTR
S000028813 ORF Uncharacterized YAL063C-A chromosome 1 1 22687 22397 C 2003-07-29 2003-07-29 Putative protein of unknown function; identified by expression profiling and mass spectrometry
S000033613 CDS YAL063C-A 1 22687 22397 C 2003-07-29 2003-07-29
S000000059 ORF Verified YAL063C FLO9 chromosome 1 L000003331 1 27969 24001 C 1996-07-31 1996-07-31 Lectin-like protein with similarity to Flo1p, thought to be expressed and involved in flocculation
S000036982 CDS YAL063C 1 27969 24001 C 1996-07-31 1996-07-31
S000118317 ARS ARS104 ARSI-31 chromosome 1 1 30947 31184 2006-08-30 2006-08-30 Autonomously Replicating Sequence
S000000058 ORF Verified YAL062W GDH3 FUN51 chromosome 1 L000000698 1 31568 32941 W 1996-07-31 1996-07-31 NADP(+)-dependent glutamate dehydrogenase, synthesizes glutamate from ammonia and alpha-ketoglutarate; rate of alpha-ketoglutarate utilization differs from Gdh1p; expression regulated by nitrogen and carbon sources
S000036963 CDS YAL062W 1 31568 32941 W 1996-07-31 1996-07-31
S000000057 ORF Uncharacterized YAL061W BDH2 chromosome 1 1 33449 34702 W 1996-07-31 1996-07-31 Putative medium-chain alcohol dehydrogenase with similarity to BDH1; transcription induced by constitutively active PDR1 and PDR3
S000036902 CDS YAL061W 1 33449 34702 W 1996-07-31 1996-07-31
S000000056 ORF Verified YAL060W BDH1 BDH chromosome 1 1 35156 36304 W 1996-07-31 1996-07-31 NAD-dependent (R,R)-butanediol dehydrogenase, catalyzes oxidation of (R,R)-2,3-butanediol to (3R)-acetoin, oxidation of meso-butanediol to (3S)-acetoin, and reduction of acetoin; enhances use of 2,3-butanediol as an aerobic carbon source
S000036089 CDS YAL060W 1 35156 36304 W 1996-07-31 1996-07-31
S000000055 ORF Verified YAL059W ECM1 chromosome 1 L000003052 1 36510 37148 W 1996-07-31 1996-07-31 Protein of unknown function, localized in the nucleoplasm and the nucleolus, genetically interacts with MTR2 in 60S ribosomal protein subunit export
S000035122 CDS YAL059W 1 36510 37148 W 1996-07-31 1996-07-31
S000028734 ORF Dubious YAL059C-A chromosome 1 1 36919 36497 C 2003-07-29 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified gene ECM1/YAL059W
S000033378 CDS YAL059C-A 1 36919 36497 C 2003-07-29 2003-07-29
S000000054 ORF Verified YAL058W CNE1 FUN48 chromosome 1 L000000373 1 37465 38973 W 1996-07-31 1996-07-31 Calnexin; integral membrane ER chaperone involved in folding and quality control of glycoproteins; chaperone activity is inhibited by Mpd1p, with which Cne1p interacts; 24% identical to mammalian calnexin; Ca+ binding not yet shown in yeast
S000034933 CDS YAL058W 1 37465 38973 W 1996-07-31 1996-07-31
S000002139 ORF Dubious YAL056C-A YAL058C-A chromosome 1 1 39047 38697 C 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000035879 CDS YAL056C-A 1 39047 38697 C 1996-07-31 1996-07-31
S000000052 ORF Verified YAL056W GPB2 KRH1 chromosome 1 1 39260 41902 W 2004-01-20 2004-01-20|1996-07-31 Multistep regulator of cAMP-PKA signaling; inhibits PKA downstream of Gpa2p and Cyr1p, thereby increasing cAMP dependency; inhibits Ras activity through direct interactions with Ira1p/2p; regulated by G-alpha protein Gpa2p; homolog of Gpb1p
S000033885 CDS YAL056W 1 39260 41902 W 2004-01-20 2004-01-20|1996-07-31
S000121254 ARS ARS105 ARSI-42 chromosome 1 1 41809 42183 2007-03-07 2007-03-07 Autonomously Replicating Sequence
S000000051 ORF Verified YAL055W PEX22 YAF5 chromosome 1 1 42178 42720 W 2004-01-20 1996-07-31 Putative peroxisomal membrane protein required for import of peroxisomal proteins, functionally complements a Pichia pastoris pex22 mutation
S000033812 CDS YAL055W 1 42178 42720 W 2004-01-20 1996-07-31
S000000050 ORF Verified YAL054C ACS1 FUN44 chromosome 1 L000000024 1 45023 42882 C -63.11 2004-01-20 1996-07-31 Acetyl-coA synthetase isoform which, along with Acs2p, is the nuclear source of acetyl-coA for histone acetlyation; expressed during growth on nonfermentable carbon sources and under aerobic conditions
S000033073 CDS YAL054C 1 45023 42882 C 2004-01-20 1996-07-31
S000000049 ORF Verified YAL053W FLC2 HUF2 chromosome 1 1 45900 48251 W 2004-01-20 1996-07-31 Putative FAD transporter; required for uptake of FAD into endoplasmic reticulum; involved in cell wall maintenance
S000033037 CDS YAL053W 1 45900 48251 W 2004-01-20 1996-07-31
S000000048 ORF Verified YAL051W OAF1 YAF1 chromosome 1 L000004197 1 48565 51708 W 2004-07-20 2004-07-20|1996-07-31 Oleate-activated transcription factor, acts alone and as a heterodimer with Pip2p; activates genes involved in beta-oxidation of fatty acids and peroxisome organization and biogenesis
S000032862 CDS YAL051W 1 48565 51708 W 2004-07-20 2004-07-20|1996-07-31
S000000047 ORF Verified YAL049C AIM2 chromosome 1 1 52596 51856 C 2004-07-20 1996-07-31 Cytoplasmic protein involved in mitochondrial function or organization; null mutant displays reduced frequency of mitochondrial genome loss; potential Hsp82p interactor
S000031896 CDS YAL049C 1 52596 51856 C 2004-07-20 1996-07-31
S000028733 ORF Dubious YAL047W-A chromosome 1 1 54585 54914 W 2004-07-20 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000033377 CDS YAL047W-A 1 54585 54914 W 2004-07-20 2003-07-29
S000000046 ORF Verified YAL048C GEM1 GON1 chromosome 1 1 54790 52802 C 2004-07-20 1996-07-31 Evolutionarily-conserved tail-anchored outer mitochondrial membrane GTPase which regulates mitochondrial morphology; cells lacking Gem1p contain collapsed, globular, or grape-like mitochondria; not required for pheromone-induced cell death
S000030895 CDS YAL048C 1 54790 52802 C 2004-07-20 1996-07-31
S000000045 ORF Verified YAL047C SPC72 LDB4 chromosome 1 L000003455 1 56858 54990 C 2004-07-20 1996-07-31 Component of the cytoplasmic Tub4p (gamma-tubulin) complex, binds spindle pole bodies and links them to microtubules; has roles in astral microtubule formation and stabilization
S000030803 CDS YAL047C 1 56858 54990 C 2004-07-20 1996-07-31
S000000044 ORF Verified YAL046C AIM1 chromosome 1 1 57386 57030 C 2004-07-20 1996-07-31 Protein involved in mitochondrial function or organization; null mutant displays elevated frequency of mitochondrial genome loss
S000030666 CDS YAL046C 1 57386 57030 C 2004-07-20 1996-07-31
S000007586 ORF Uncharacterized YAL044W-A chromosome 1 1 57519 57851 W 2004-07-20 2001-01-30 Putative protein of unknown function; similar to S. pombe uvi31 which is a putative DNA repair protein
S000037097 CDS YAL044W-A 1 57519 57851 W 2004-07-20 2001-01-30
S000000043 ORF Dubious YAL045C chromosome 1 1 57797 57489 C 2004-07-20 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; almost completely overlaps YAL044W-A
S000030576 CDS YAL045C 1 57797 57489 C 2004-07-20 1996-07-31
S000000042 ORF Verified YAL044C GCV3 chromosome 1 L000003501 1 58463 57951 C 2004-07-20 2003-09-22|1996-07-31|2008-03-05 H subunit of the mitochondrial glycine decarboxylase complex, required for the catabolism of glycine to 5,10-methylene-THF; also required for all protein lipoylation; expression is regulated by levels of 5,10-methylene-THF
S000037751 CDS YAL044C 1 58463 57951 C 2004-07-20 2003-09-22|1996-07-31|2008-03-05
S000000041 ORF Verified YAL043C PTA1 FUN39 chromosome 1 L000001522 1 61053 58696 C 2004-07-20 1996-07-31 Subunit of holo-CPF, a multiprotein complex and functional homolog of mammalian CPSF, required for the cleavage and polyadenylation of mRNA and snoRNA 3' ends; involved in pre-tRNA processing; binds to the phosphorylated CTD of RNAPII
S000037691 CDS YAL043C 1 61053 58696 C 2004-07-20 1996-07-31
S000000040 ORF Verified YAL042W ERV46 FUN9 chromosome 1 L000000633 1 61317 62564 W 2004-07-20 1996-07-31 Protein localized to COPII-coated vesicles, forms a complex with Erv41p; involved in the membrane fusion stage of transport
S000037669 CDS YAL042W 1 61317 62564 W 2004-07-20 1996-07-31
S000002138 ORF Dubious YAL042C-A YAL043C-A chromosome 1 1 61609 61232 C 2004-07-20 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified ORF ERV46/YAL042W; YAL042C-A is a non-essential gene
S000030422 CDS YAL042C-A 1 61609 61232 C 2004-07-20 1996-07-31
S000000039 ORF Verified YAL041W CDC24 CLS4 chromosome 1 L000000262 1 62841 65405 W -56 2004-07-20 1996-07-31 Guanine nucleotide exchange factor (GEF or GDP-release factor) for Cdc42p; required for polarity establishment and maintenance, and mutants have morphological defects in bud formation and shmooing
S000037599 CDS YAL041W 1 62841 65405 W 2004-07-20 1996-07-31
S000000038 ORF Verified YAL040C CLN3 WHI1|FUN10|DAF1 chromosome 1 L000000359 1 67521 65779 C -56 2004-07-20 1996-07-31 G1 cyclin involved in cell cycle progression; activates Cdc28p kinase to promote the G1 to S phase transition; plays a role in regulating transcription of the other G1 cyclins, CLN1 and CLN2; regulated by phosphorylation and proteolysis
S000036825 CDS YAL040C 1 67521 65779 C 2004-07-20 1996-07-31
S000000037 ORF Verified YAL039C CYC3 chromosome 1 L000000450 1 69526 68717 C -47 2004-07-20 1996-07-31 Cytochrome c heme lyase (holocytochrome c synthase), attaches heme to apo-cytochrome c (Cyc1p or Cyc7p) in the mitochondrial intermembrane space; human ortholog may have a role in microphthalmia with linear skin defects (MLS)
S000035956 CDS YAL039C 1 69526 68717 C 2004-07-20 1996-07-31
S000118318 ARS ARS106 ARSI-70 chromosome 1 1 70258 70490 2006-08-30 2006-08-30 Autonomously Replicating Sequence
S000000036 ORF Verified YAL038W CDC19 PYK1 chromosome 1 L000000258 1 71787 73289 W -45 2004-07-20 1996-07-31 Pyruvate kinase, functions as a homotetramer in glycolysis to convert phosphoenolpyruvate to pyruvate, the input for aerobic (TCA cycle) or anaerobic (glucose fermentation) respiration
S000035915 CDS YAL038W 1 71787 73289 W 2004-07-20 1996-07-31
S000028592 ORF Dubious YAL037C-B chromosome 1 1 73301 72327 C 2004-07-20 2003-07-29 Dubious open reading frame unlikely to encode a protein; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching
S000031366 CDS YAL037C-B 1 73301 72327 C 2004-07-20 2003-07-29
S000028732 ORF Uncharacterized YAL037C-A chromosome 1 1 73519 73427 C 2004-07-20 2003-07-29 Putative protein of unknown function
S000033376 CDS YAL037C-A 1 73519 73427 C 2004-07-20 2003-07-29
S000000035 ORF Uncharacterized YAL037W chromosome 1 1 74021 74824 W 2004-07-20 1996-07-31 Putative protein of unknown function
S000035798 CDS YAL037W 1 74021 74824 W 2004-07-20 1996-07-31
S000000034 ORF Verified YAL036C RBG1 FUN11 chromosome 1 L000000634 1 76153 75044 C 2004-07-20 1996-07-31 Member of the DRG family of GTP-binding proteins; associates with translating ribosomes; interacts with Tma46p, Ygr250cp, Gir2p and Yap1p via two-hybrid
S000034719 CDS YAL036C 1 76153 75044 C 2004-07-20 1996-07-31
S000000033 ORF Verified YAL035W FUN12 yIF2 chromosome 1 L000000635 1 76428 79436 W 2004-07-20 1996-07-31 GTPase, required for general translation initiation by promoting Met-tRNAiMet binding to ribosomes and ribosomal subunit joining; homolog of bacterial IF2
S000034678 CDS YAL035W 1 76428 79436 W 2004-07-20 1996-07-31
S000000032 ORF Verified YAL034W-A MTW1 NSL2|DSN3 chromosome 1 S000007418 1 79719 80588 W 2004-07-20 1996-07-31 Essential component of the MIND kinetochore complex (Mtw1p Including Nnf1p-Nsl1p-Dsn1p) which joins kinetochore subunits contacting DNA to those contacting microtubules; critical to kinetochore assembly
S000031836 CDS YAL034W-A 1 79719 80588 W 2004-07-20 1996-07-31
S000002137 ORF Dubious YAL034C-B YAL035C-A chromosome 1 1 79843 79490 C 2004-07-20 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000031374 CDS YAL034C-B 1 79843 79490 C 2004-07-20 1996-07-31
S000002134 ORF Verified YAL034C FUN19 chromosome 1 L000000637 1 81952 80711 C 2004-07-20 2003-09-22|1996-07-31 Non-essential protein of unknown function; expression induced in response to heat stress
S000034508 CDS YAL034C 1 81952 80711 C 2004-07-20 2003-09-22|1996-07-31
S000000031 ORF Verified YAL033W POP5 FUN53 chromosome 1 L000004301|L000000649 1 82707 83228 W 2004-07-20 1996-07-31 Subunit of both RNase MRP, which cleaves pre-rRNA, and nuclear RNase P, which cleaves tRNA precursors to generate mature 5' ends
S000034465 CDS YAL033W 1 82707 83228 W 2004-07-20 1996-07-31
S000000030 ORF Verified YAL032C PRP45 FUN20 chromosome 1 L000000638 1 84475 83336 C 2004-07-20 1996-07-31 Protein required for pre-mRNA splicing; associates with the spliceosome and interacts with splicing factors Prp22p and Prp46p; orthologous to human transcriptional coactivator SKIP and can activate transcription of a reporter gene
S000033541 CDS YAL032C 1 84475 83336 C 2004-07-20 1996-07-31
S000028731 ORF Dubious YAL031W-A chromosome 1 1 84670 84978 W 2004-07-20 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000033375 CDS YAL031W-A 1 84670 84978 W 2004-07-20 2003-07-29
S000000029 ORF Verified YAL031C GIP4 FUN21 chromosome 1 L000000639 1 87032 84750 C 2004-07-20 1996-07-31 Cytoplasmic Glc7-interacting protein whose overexpression relocalizes Glc7p from the nucleus and prevents chromosome segregation; potential Cdc28p substrate
S000033476 CDS YAL031C 1 87032 84750 C 2004-07-20 1996-07-31
S000000028 ORF Verified YAL030W SNC1 chromosome 1 L000001942 1 87287 87753 W 2004-07-20 1996-07-31 Vesicle membrane receptor protein (v-SNARE) involved in the fusion between Golgi-derived secretory vesicles with the plasma membrane; proposed to be involved in endocytosis; member of the synaptobrevin/VAMP family of R-type v-SNARE proteins
S000033437 CDS YAL030W 1 87287 87388 W 2004-07-20 1996-07-31
S000033438 CDS YAL030W 1 87502 87753 W 2004-07-20 1996-07-31
S000033439 intron YAL030W 1 87389 87501 W 2004-07-20 1996-07-31
S000000027 ORF Verified YAL029C MYO4 SHE1|FUN22 chromosome 1 L000000640|L000001224 1 92271 87856 C 2004-07-20 1996-07-31 One of two type V myosin motors (along with MYO2) involved in actin-based transport of cargos; required for mRNA transport, including ASH1 mRNA, and facilitating the growth and movement of ER tubules into the growing bud along with She3p
S000033821 CDS YAL029C 1 92271 87856 C 2004-07-20 1996-07-31
S000000026 ORF Verified YAL028W FRT2 HPH2 chromosome 1 1 92901 94487 W 2004-07-20 1996-07-31 Tail-anchored endoplasmic reticulum membrane protein, interacts with homolog Frt1p but is not a substrate of calcineurin (unlike Frt1p), promotes growth in conditions of high Na+, alkaline pH, or cell wall stress; potential Cdc28p substrate
S000033747 CDS YAL028W 1 92901 94487 W 2004-07-20 1996-07-31
S000000025 ORF Verified YAL027W SAW1 chromosome 1 1 94688 95473 W 2004-07-20 1996-07-31 Protein involved in Rad1p/Rad10p-dependent removal of 3'-nonhomologous tails during double-strand break repair via single-strand annealing; green fluorescent protein (GFP)-fusion protein localizes to the nucleus
S000033629 CDS YAL027W 1 94688 95473 W 2004-07-20 1996-07-31
S000028730 ORF Dubious YAL026C-A chromosome 1 1 95824 95387 C 2004-07-20 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YAL027W and the verified gene DRS2
S000033374 CDS YAL026C-A 1 95824 95387 C 2004-07-20 2003-07-29
S000119380 ncRNA HRA1 HRA1 chromosome 1 1 99306 99869 W 2007-05-08 2007-02-06|2007-05-08 Non-protein-coding RNA, substrate of RNase P, possibly involved in rRNA processing, specifically maturation of 20S precursor into the mature 18S rRNA
S000120654 noncoding_exon HRA1 1 99306 99869 W 2007-05-08 2007-02-06|2007-05-08
S000000024 ORF Verified YAL026C DRS2 SWA3|FUN38 chromosome 1 L000000526 1 99698 95631 C 2004-07-20 1996-07-31 Aminophospholipid translocase (flippase) that maintains membrane lipid asymmetry in post-Golgi secretory vesicles; contributes to clathrin-coated vesicle formation and endocytosis; mutations in human homolog ATP8B1 result in liver disease
S000030197 CDS YAL026C 1 99698 95631 C 2004-07-20 1996-07-31
S000000023 ORF Verified YAL025C MAK16 chromosome 1 L000000989 1 101146 100226 C -31 2004-07-20 1996-07-31 Essential nuclear protein, constituent of 66S pre-ribosomal particles; required for maturation of 25S and 5.8S rRNAs; required for maintenance of M1 satellite double-stranded RNA of the L-A virus
S000030064 CDS YAL025C 1 101146 100226 C 2004-07-20 1996-07-31
S000000022 ORF Verified YAL024C LTE1 MSI2 chromosome 1 L000000955 1 105873 101566 C -31 2004-07-20 1996-07-31 Protein similar to GDP/GTP exchange factors but without detectable GEF activity; required for asymmetric localization of Bfa1p at daughter-directed spindle pole bodies and for mitotic exit at low temperatures
S000029981 CDS YAL024C 1 105873 101566 C 2004-07-20 1996-07-31
S000000021 ORF Verified YAL023C PMT2 FUN25 chromosome 1 L000000642|L000001459 1 108552 106273 C 2004-07-20 2002-12-17|1996-07-31 Protein O-mannosyltransferase, transfers mannose residues from dolichyl phosphate-D-mannose to protein serine/threonine residues; acts in a complex with Pmt1p, can instead interact with Pmt5p in some conditions; target for new antifungals
S000037355 CDS YAL023C 1 108552 106273 C 2004-07-20 2002-12-17|1996-07-31
S000000020 ORF Verified YAL022C FUN26 chromosome 1 L000000643 1 110431 108878 C 2004-07-20 1996-07-31 Nucleoside transporter with broad nucleoside selectivity; localized to intracellular membranes
S000037286 CDS YAL022C 1 110431 108878 C 2004-07-20 1996-07-31
S000000019 ORF Verified YAL021C CCR4 NUT21|FUN27 chromosome 1 L000000239 1 113360 110847 C -25 2004-07-20 1996-07-31 Component of the CCR4-NOT transcriptional complex, which is involved in regulation of gene expression; component of the major cytoplasmic deadenylase, which is involved in mRNA poly(A) tail shortening
S000037200 CDS YAL021C 1 113360 110847 C 2004-07-20 1996-07-31
S000028729 ORF Dubious YAL019W-A chromosome 1 1 114251 114820 W 2004-07-20 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000032720 CDS YAL019W-A 1 114251 114820 W 2004-07-20 2003-07-29
S000000018 ORF Verified YAL020C ATS1 KTI13|FUN28 chromosome 1 L000000644|L000000154 1 114616 113615 C 2004-07-20 1996-07-31 Protein required, with Elongator complex, Kti11p, and Kti12p, for modification of wobble nucleosides in tRNA; has a potential role in regulatory interactions between microtubules and the cell cycle
S000037124 CDS YAL020C 1 114616 113615 C 2004-07-20 1996-07-31
S000000017 ORF Verified YAL019W FUN30 chromosome 1 L000000645 1 114920 118315 W 2004-07-20 1996-07-31 Protein whose overexpression affects chromosome stability, potential Cdc28p substrate; homolog of Snf2p; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
S000037555 CDS YAL019W 1 114920 118315 W 2004-07-20 1996-07-31
S000000016 ORF Uncharacterized YAL018C chromosome 1 1 119542 118565 C 2004-07-20 1996-07-31 Putative protein of unknown function
S000032033 CDS YAL018C 1 119542 118565 C 2004-07-20 1996-07-31
S000000015 ORF Verified YAL017W PSK1 FUN31 chromosome 1 L000000646 1 120226 124296 W 2004-07-20 1996-07-31 One of two (see also PSK2) PAS domain containing S/T protein kinases; coordinately regulates protein synthesis and carbohydrate metabolism and storage in response to a unknown metabolite that reflects nutritional status
S000031992 CDS YAL017W 1 120226 124296 W 2004-07-20 1996-07-31
S000118319 ARS ARS107 ARSI-125 chromosome 1 1 124350 124598 2006-08-30 2006-08-30 Autonomously Replicating Sequence
S000028528 ORF Dubious YAL016C-B chromosome 1 1 124493 124308 C 2004-07-20 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000030333 CDS YAL016C-B 1 124493 124308 C 2004-07-20 2003-07-29
S000000014 ORF Verified YAL016W TPD3 FUN32 chromosome 1 L000002325 1 124880 126787 W .5 2004-07-20 1996-07-31 Regulatory subunit A of the heterotrimeric protein phosphatase 2A (PP2A), which also contains regulatory subunit Cdc55p and either catalytic subunit Pph21p or Pph22p; required for cell morphogenesis and transcription by RNA polymerase III
S000031874 CDS YAL016W 1 124880 126787 W 2004-07-20 1996-07-31
S000028728 ORF Dubious YAL016C-A chromosome 1 1 125070 124756 C 2004-07-20 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000032719 CDS YAL016C-A 1 125070 124756 C 2004-07-20 2003-07-29
S000000013 ORF Verified YAL015C NTG1 SCR1|FUN33 chromosome 1 L000004114 1 128103 126904 C 2004-07-20 1996-07-31 DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase involved in base excision repair; distribution between nucleus and mitochondrion varies according to which compartment is under oxidative stress and is also sumoylation-dependent
S000036247 CDS YAL015C 1 128103 126904 C 2004-07-20 1996-07-31
S000000012 ORF Verified YAL014C SYN8 SLT2|UIP2 chromosome 1 1 129020 128253 C 2004-07-20 2002-12-17|1996-07-31 Endosomal SNARE related to mammalian syntaxin 8
S000036146 CDS YAL014C 1 129020 128253 C 2004-07-20 2002-12-17|1996-07-31
S000000011 ORF Verified YAL013W DEP1 FUN54 chromosome 1 L000000502 1 129271 130533 W 12 2004-07-20 2003-12-15|1996-07-31 Transcriptional modulator involved in regulation of structural phospholipid biosynthesis genes and metabolically unrelated genes, as well as maintenance of telomeres, mating efficiency, and sporulation
S000036100 CDS YAL013W 1 129271 130533 W 2004-07-20 2003-12-15|1996-07-31
S000000010 ORF Verified YAL012W CYS3 STR1|FUN35|CYI1 chromosome 1 L000000470 1 130802 131986 W -16 2004-07-20 1996-07-31 Cystathionine gamma-lyase, catalyzes one of the two reactions involved in the transsulfuration pathway that yields cysteine from homocysteine with the intermediary formation of cystathionine
S000035250 CDS YAL012W 1 130802 131986 W 2004-07-20 1996-07-31
S000000009 ORF Verified YAL011W SWC3 SWC1 chromosome 1 1 132202 134079 W 2004-07-20 2003-09-22|1996-07-31 Protein of unknown function, component of the SWR1 complex, which exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; required for formation of nuclear-associated array of smooth endoplasmic reticulum known as karmellae
S000035116 CDS YAL011W 1 132202 134079 W 2004-07-20 2003-09-22|1996-07-31
S000000008 ORF Verified YAL010C MDM10 FUN37 chromosome 1 L000000648|L000001053 1 135667 134186 C 2004-07-20 1996-07-31 Subunit of both the ERMES complex that links the ER to mitochondria, and of the mitochondrial sorting and assembly machinery (SAM complex) that functions in import and assembly of outer membrane beta-barrel proteins
S000034958 CDS YAL010C 1 135667 134186 C 2004-07-20 1996-07-31
S000000007 ORF Verified YAL009W SPO7 chromosome 1 L000002000 1 135856 136635 W -4 2004-07-20 1996-07-31 Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme, regulates nuclear growth by controlling phospholipid biosynthesis, required for normal nuclear envelope morphology, premeiotic replication, and sporulation
S000034070 CDS YAL009W 1 135856 136635 W 2004-07-20 1996-07-31
S000000006 ORF Verified YAL008W FUN14 chromosome 1 L000000636 1 136916 137512 W 2004-07-20 1996-07-31 Mitochondrial protein of unknown function
S000033957 CDS YAL008W 1 136916 137512 W 2004-07-20 1996-07-31
S000000005 ORF Verified YAL007C ERP2 chromosome 1 L000004679 1 138347 137700 C 2004-07-20 1996-07-31 Protein that forms a heterotrimeric complex with Erp1p, Emp24p, and Erv25p; member, along with Emp24p and Erv25p, of the p24 family involved in ER to Golgi transport and localized to COPII-coated vesicles
S000033112 CDS YAL007C 1 138347 137700 C 2004-07-20 1996-07-31
S000006786 long_terminal_repeat YALCdelta2 chromosome 1 1 138994 138833 C 2004-07-20 2000-05-19 Ty1 LTR
S000006680 tRNA tP(UGG)A TRN1 chromosome 1 L000003601 1 139154 139256 W -2 2004-07-20 2000-05-19 tRNA-Pro; target of K. lactis zymocin
S000035969 intron tP(UGG)A 1 139190 139220 W 2004-07-20 2000-05-19
S000035967 noncoding_exon tP(UGG)A 1 139154 139189 W 2004-07-20 2000-05-19
S000035968 noncoding_exon tP(UGG)A 1 139221 139256 W 2004-07-20 2000-05-19
S000002136 ORF Dubious YAL004W chromosome 1 1 140762 141409 W 2004-07-20 1996-07-31|2007-04-05 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps verified gene SSA1/YAL005C
S000032057 CDS YAL004W 1 140762 141409 W 2004-07-20 1996-07-31|2007-04-05
S000000004 ORF Verified YAL005C SSA1 YG100 chromosome 1 L000002069 1 141433 139505 C -1 2004-07-20 1996-07-31|2007-04-05 ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport; member of heat shock protein 70 (HSP70) family; forms a chaperone complex with Ydj1p; localized to the nucleus, cytoplasm, and cell wall
S000032096 CDS YAL005C 1 141433 139505 C 2004-07-20 1996-07-31|2007-04-05
S000000003 ORF Verified YAL003W EFB1 TEF5 chromosome 1 L000000542 1 142176 143162 W 2004-07-20 1996-07-31|1999-07-17 Translation elongation factor 1 beta; stimulates nucleotide exchange to regenerate EF-1 alpha-GTP for the next elongation cycle; part of the EF-1 complex, which facilitates binding of aminoacyl-tRNA to the ribosomal A site
S000031941 CDS YAL003W 1 142176 142255 W 2004-07-20 1999-07-17|1996-07-31
S000031942 CDS YAL003W 1 142622 143162 W 2004-07-20 1999-07-17|1996-07-31
S000031943 intron YAL003W 1 142256 142621 W 2004-07-20 1999-07-17|1996-07-31
S000007500 snoRNA snR18 SNR18 chromosome 1 1 142369 142470 W 2007-05-08 2000-05-19|2007-05-08 C/D box small nucleolar RNA (snoRNA); commonly referred to as U18; guides 2'-O-methylation of large subunit (LSU) rRNA at positions A649 and C650
S000036595 noncoding_exon snR18 1 142369 142470 W 2007-05-08 2000-05-19|2007-05-08
S000000002 ORF Verified YAL002W VPS8 VPL8|VPT8|FUN15 chromosome 1 L000003013 1 143709 147533 W 2004-07-20 2004-01-14|1996-07-31 Membrane-associated protein that interacts with Vps21p to facilitate soluble vacuolar protein localization; component of the CORVET complex; required for localization and trafficking of the CPY sorting receptor; contains RING finger motif
S000031737 CDS YAL002W 1 143709 147533 W 2004-07-20 2004-01-14|1996-07-31
S000121255 ARS ARS108 ARSI-147 chromosome 1 1 146703 147690 2007-03-07 2007-03-07 Autonomously Replicating Sequence
S000000001 ORF Verified YAL001C TFC3 TSV115|FUN24 chromosome 1 L000000641|L000002287 1 151168 147596 C -1 2004-07-20 1996-07-31 Largest of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC); part of the TauB domain of TFIIIC that binds DNA at the BoxB promoter sites of tRNA and similar genes; cooperates with Tfc6p in DNA binding
S000030735 CDS YAL001C 1 151008 147596 C 2004-07-20 1996-07-31
S000030734 CDS YAL001C 1 151168 151099 C 2004-07-20 1996-07-31
S000030736 intron YAL001C 1 151098 151009 C 2004-07-20 1996-07-31
S000006463 centromere CEN1 CEN1 chromosome 1 L000000294 1 151467 151584 W 0 2006-05-08 2000-05-19|2006-05-08 Chromosome I centromere
S000077257 CDEI CEN1 1 151467 151476 W 2004-10-04 2004-10-04
S000077258 CDEII CEN1 1 151477 151559 W 2004-10-04 2004-10-04
S000077259 CDEIII CEN1 1 151560 151584 W 2004-10-04 2004-10-04
S000000063 ORF Verified YAR002W NUP60 chromosome 1 1 152259 153878 W 2004-07-20 1996-07-31 Subunit of the nuclear pore complex (NPC), functions to anchor Nup2p to the NPC in a process controlled by the nucleoplasmic concentration of Gsp1p-GTP; potential Cdc28p substrate; involved in telomere maintenance
S000035473 CDS YAR002W 1 152259 153878 W 2004-07-20 1996-07-31
S000002129 ORF Verified YAR002C-A ERP1 chromosome 1 L000004678 1 154726 154067 C 2004-07-20 1999-07-17 Protein that forms a heterotrimeric complex with Erp2p, Emp24p, and Erv25p; member, along with Emp24p and Erv25p, of the p24 family involved in ER to Golgi transport and localized to COPII-coated vesicles
S000032940 CDS YAR002C-A 1 154726 154067 C 2004-07-20 1999-07-17
S000000064 ORF Verified YAR003W SWD1 SAF49|CPS50|FUN16 chromosome 1 1 155007 156287 W 2004-07-20 1996-07-31 Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member with similarity to mammalian Rbbp7
S000035547 CDS YAR003W 1 155007 156287 W 2004-07-20 1996-07-31
S000000065 ORF Verified YAR007C RFA1 RPA1|FUN3|BUF2 chromosome 1 L000000204|L000001620 1 158621 156756 C -3 2004-07-20 1996-07-31 Subunit of heterotrimeric Replication Protein A (RPA), which is a highly conserved single-stranded DNA binding protein involved in DNA replication, repair, and recombination
S000036676 CDS YAR007C 1 158621 156756 C 2004-07-20 1996-07-31
S000000066 ORF Verified YAR008W SEN34 FUN4 chromosome 1 L000003973 1 158967 159794 W 2004-07-20 1996-07-31 Subunit of the tRNA splicing endonuclease, which is composed of Sen2p, Sen15p, Sen34p, and Sen54p; Sen34p contains the active site for tRNA 3' splice site cleavage and has similarity to Sen2p and to Archaeal tRNA splicing endonuclease
S000037450 CDS YAR008W 1 158967 159794 W 2004-07-20 1996-07-31
S000077372 ARS ARS109 ARS101 ARSI-160 chromosome 1 1 159908 160128 2006-09-06 2004-10-18|2006-09-06 ARS containing multiple redundant binding sites for the origin recognition complex
S000121251 ARS consensus sequence ARS109 1 159946 159936 C 2007-03-07 2007-03-07
S000118986 ARS consensus sequence ARS109 1 159953 159967 W 2006-10-02 2006-10-02
S000006788 long_terminal_repeat YARCdelta3 chromosome 1 1 160238 160106 C 2004-07-20 2000-05-19 Ty1 LTR
S000006789 long_terminal_repeat YARCdelta4 chromosome 1 1 160575 160239 C 2004-07-20 2000-05-19 Ty1 LTR
S000000067 transposable_element_gene YAR009C YARCTyB1-1 chromosome 1 1 164188 160598 C 2004-07-20 1996-07-31 Retrotransposon TYA Gag and TYB Pol genes; in YARCTY1-1 TYB is mutant and probably non-functional
S000037508 CDS YAR009C 1 164188 160598 C 2004-07-20 1996-07-31
S000000068 transposable_element_gene YAR010C YARCTyA1-1 chromosome 1 1 165867 164545 C 2004-07-20 1996-07-31 Retrotransposon TYA Gag gene co-transcribed with TYB Pol; in YARCTY1-1 TYB is mutant and probably non-functional
S000030210 CDS YAR010C 1 165867 164545 C 2004-07-20 1996-07-31
S000006790 long_terminal_repeat YARCdelta5 chromosome 1 1 166163 165827 C 2004-07-20 2000-05-19 Ty1 LTR
S000006792 retrotransposon YARCTy1-1 chromosome 1 1 166163 160239 C 2004-07-20 2000-05-19 Long Terminal Repeat (LTR) retrotransposon of the Copia (Pseudoviridae) group; contains genes TYA Gag and TYB Pol, encoding proteins involved in structure and function of virus-like particles, flanked by two direct repeats; mutated in S288C
S000006521 tRNA tA(UGC)A chromosome 1 L000003602 1 166268 166340 W 2004-07-20 2000-05-19 tRNA-Ala (Ala2), one of 5 nuclear tRNA genes containing the tDNA-anticodon TGC (mature tRNA may be UGC or may contain modified bases), decodes GCA and probably GCG codons into alanine, one of 16 nuclear tRNAs for alanine
S000034842 noncoding_exon tA(UGC)A 1 166268 166340 W 2004-07-20 2000-05-19
S000000069 ORF Verified YAR014C BUD14 chromosome 1 1 168866 166743 C 2004-07-20 2004-01-27|1996-07-31 Protein involved in bud-site selection, Bud14p-Glc7p complex is a cortical regulator of dynein; inhibitor of the actin assembly factor Bnr1p (formin); diploid mutants display a random budding pattern instead of the wild-type bipolar pattern
S000031457 CDS YAR014C 1 168866 166743 C 2004-07-20 2004-01-27|1996-07-31
S000000070 ORF Verified YAR015W ADE1 chromosome 1 L000000031 1 169370 170290 W 4 2004-07-20 1996-07-31 N-succinyl-5-aminoimidazole-4-carboxamide ribotide (SAICAR) synthetase, required for 'de novo' purine nucleotide biosynthesis; red pigment accumulates in mutant cells deprived of adenine
S000031548 CDS YAR015W 1 169370 170290 W 2004-07-20 1996-07-31
S000000071 ORF Verified YAR018C KIN3 NPK1|FUN52 chromosome 1 L000000903 1 171698 170391 C 2004-07-20 1996-07-31 Nonessential protein kinase with unknown cellular role
S000032711 CDS YAR018C 1 171698 170391 C 2004-07-20 1996-07-31
S000028735 ORF Dubious YAR019W-A chromosome 1 1 174996 175340 W 2004-07-20 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000033379 CDS YAR019W-A 1 174996 175340 W 2004-07-20 2003-07-29
S000000072 ORF Verified YAR019C CDC15 LYT1 chromosome 1 L000000255 1 175133 172209 C 6 2004-07-20 1996-07-31 Protein kinase of the Mitotic Exit Network that is localized to the spindle pole bodies at late anaphase; promotes mitotic exit by directly switching on the kinase activity of Dbf2p; required for spindle disassembly after meiosis II
S000032794 CDS YAR019C 1 175133 172209 C 2004-07-20 1996-07-31
S000114488 ARS ARS110 ARS110 ARSI-176 chromosome 1 1 176155 176402 2006-09-06 2006-02-28|2006-09-06 Autonomously Replicating Sequence, originally referred to as ADE1 ARS
S000000073 ORF Verified YAR020C PAU7 chromosome 1 1 177021 176854 C 2004-07-20 1996-07-31 Member of the seripauperin multigene family, active during alcoholic fermentation, regulated by anaerobiosis, inhibited by oxygen, repressed by heme
S000034578 CDS YAR020C 1 177021 176854 C 2004-07-20 1996-07-31
S000000074 ORF Uncharacterized YAR023C chromosome 1 1 179818 179279 C 2004-07-20 1996-07-31 Putative integral membrane protein, member of DUP240 gene family
S000035643 CDS YAR023C 1 179818 179279 C 2004-07-20 1996-07-31
S000006636 tRNA tL(CAA)A SUP56 chromosome 1 L000003603 1 181135 181248 W 10 2004-07-20 2000-05-19 tRNA-Leu
S000033745 intron tL(CAA)A 1 181173 181204 W 2004-07-20 2000-05-19
S000033743 noncoding_exon tL(CAA)A 1 181135 181172 W 2004-07-20 2000-05-19
S000033744 noncoding_exon tL(CAA)A 1 181205 181248 W 2004-07-20 2000-05-19
S000006719 tRNA tS(AGA)A chromosome 1 L000003604 1 182597 182516 C 2004-07-20 2000-05-19 tRNA-Ser
S000032337 noncoding_exon tS(AGA)A 1 182597 182516 C 2004-07-20 2000-05-19
S000006795 long_terminal_repeat YARWsigma1 chromosome 1 1 182614 182953 W 2004-07-20 2000-05-19 Ty3 LTR
S000006793 long_terminal_repeat YARWdelta6 chromosome 1 1 183136 183468 W 2004-07-20 2000-05-19 Ty1 LTR
S000000075 ORF Verified YAR027W UIP3 chromosome 1 1 183764 184471 W 2004-07-20 1996-07-31 Putative integral membrane protein of unknown function; interacts with Ulp1p at the nuclear periphery; member of DUP240 gene family
S000036855 CDS YAR027W 1 183764 184471 W 2004-07-20 1996-07-31
S000000076 ORF Uncharacterized YAR028W chromosome 1 1 184886 185590 W 2004-07-20 1996-07-31 Putative integral membrane protein, member of DUP240 gene family; GFP-fusion protein is induced in response to the DNA-damaging agent MMS
S000036899 CDS YAR028W 1 184886 185590 W 2004-07-20 1996-07-31
S000000077 ORF Uncharacterized YAR029W chromosome 1 1 186315 186539 W 2004-07-20 1996-07-31 Member of DUP240 gene family but contains no transmembrane domains; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern
S000036967 CDS YAR029W 1 186315 186539 W 2004-07-20 1996-07-31
S000000078 ORF Verified YAR031W PRM9 chromosome 1 1 186830 187726 W 2004-07-20 1996-07-31 Pheromone-regulated protein with 3 predicted transmembrane segments and an FF sequence, a motif involved in COPII binding; member of DUP240 gene family
S000030609 CDS YAR031W 1 186830 187726 W 2004-07-20 1996-07-31
S000001821 ORF Dubious YAR030C chromosome 1 1 186847 186506 C 2004-07-20 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YAR029W and the verified gene PRM9
S000036694 CDS YAR030C 1 186847 186506 C 2004-07-20 1996-07-31
S000000079 ORF Verified YAR033W MST28 chromosome 1 1 188101 188805 W 2004-07-20 1996-07-31 Putative integral membrane protein, involved in vesicle formation; forms complex with Mst27p; member of DUP240 gene family; binds COPI and COPII vesicles
S000030819 CDS YAR033W 1 188101 188805 W 2004-07-20 1996-07-31
S000006794 long_terminal_repeat YARWdelta7 chromosome 1 1 189420 189751 W 2004-07-20 2000-05-19 Ty2 LTR
S000000080 ORF Verified YAR035W YAT1 chromosome 1 L000002497 1 190187 192250 W 2004-07-20 1996-07-31 Outer mitochondrial carnitine acetyltransferase, minor ethanol-inducible enzyme involved in transport of activated acyl groups from the cytoplasm into the mitochondrial matrix; phosphorylated
S000031976 CDS YAR035W 1 190187 192250 W 2004-07-20 1996-07-31
S000028595 ORF Uncharacterized YAR035C-A chromosome 1 1 192411 192331 C 2004-07-20 2003-07-29 Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; predicted to have a role in cell budding based on computational "guilt by association" analysis
S000031375 CDS YAR035C-A 1 192411 192331 C 2004-07-20 2003-07-29
S000000081 ORF Verified YAR042W SWH1 OSH1|YAR044W chromosome 1 L000002249 1 192613 196179 W 2004-07-20 2003-09-27|2006-01-19|1996-07-31 Protein similar to mammalian oxysterol-binding protein; contains ankyrin repeats; localizes to the Golgi and the nucleus-vacuole junction
S000035065 CDS YAR042W 1 192613 196179 W 2004-07-20 2003-09-27|2006-01-19|1996-07-31
S000000083 ORF Dubious YAR047C chromosome 1 1 201780 201460 C 2004-07-20 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000031684 CDS YAR047C 1 201780 201460 C 2004-07-20 1996-07-31
S000000084 ORF Verified YAR050W FLO1 FLO4|FLO2 chromosome 1 L000000617|L000000616 1 203394 208007 W 44 2004-07-20 1998-09-02|1996-07-31 Lectin-like protein involved in flocculation, cell wall protein that binds to mannose chains on the surface of other cells, confers floc-forming ability that is chymotrypsin sensitive and heat resistant; similar to Flo5p
S000036444 CDS YAR050W 1 203394 208007 W 2004-07-20 1998-09-02|1996-07-31
S000000085 ORF Dubious YAR053W chromosome 1 1 208358 208654 W 2004-07-20 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000037285 CDS YAR053W 1 208358 208654 W 2004-07-20 1996-07-31
S000006791 long_terminal_repeat YARCdelta8 chromosome 1 1 209769 209439 C 2004-07-20 2000-05-19 Ty1 LTR
S000121256 ARS ARS111 ARSI-215 chromosome 1 1 214879 215635 2007-03-07 2007-03-07 Autonomously Replicating Sequence
S000000086 ORF Dubious YAR060C chromosome 1 1 217483 217148 C 2004-07-20 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000032661 CDS YAR060C 1 217483 217148 C 2004-07-20 1996-07-31
S000000087 pseudogene YAR061W chromosome 1 1 218131 218334 W 2004-07-20 1996-07-31 Pseudogene with similarity to Flo1p, which is a lectin-like protein involved in flocculation
S000033393 CDS YAR061W 1 218131 218334 W 2004-07-20 1996-07-31
S000000088 pseudogene YAR062W chromosome 1 1 218540 219136 W 2004-07-20 1996-07-31 Pseudogene with similarity to Flo1p, which is a lectin-like protein involved in flocculation
S000033463 CDS YAR062W 1 218540 219136 W 2004-07-20 1996-07-31
S000000089 ORF Uncharacterized YAR064W chromosome 1 1 220189 220488 W 2004-07-20 1996-07-31 Putative protein of unknown function
S000033577 CDS YAR064W 1 220189 220488 W 2004-07-20 1996-07-31
S000002144 ORF Uncharacterized YAR066W chromosome 1 1 221040 221651 W 2004-07-20 1996-07-31 Putative GPI protein
S000034603 CDS YAR066W 1 221040 221651 W 2004-07-20 1996-07-31
S000000091 ORF Uncharacterized YAR068W chromosome 1 1 222397 222882 W 2004-07-20 1996-07-31 Fungal-specific protein of unknown function; induced in respiratory-deficient cells
S000035691 CDS YAR068W 1 222397 222882 W 2004-07-20 1996-07-31
S000121257 ARS ARS112 ARSI-223 chromosome 1 1 222871 224037 2007-03-07 2007-03-07 Autonomously Replicating Sequence
S000000092 ORF Dubious YAR069C chromosome 1 1 224295 224002 C 2004-07-20 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000035758 CDS YAR069C 1 224295 224002 C 2004-07-20 1996-07-31
S000000093 ORF Dubious YAR070C chromosome 1 1 224853 224554 C 2004-07-20 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000036733 CDS YAR070C 1 224853 224554 C 2004-07-20 1996-07-31
S000000094 ORF Verified YAR071W PHO11 chromosome 1 L000001423 1 225451 226854 W 48 2004-07-20 1996-07-31 One of three repressible acid phosphatases, a glycoprotein that is transported to the cell surface by the secretory pathway; induced by phosphate starvation and coordinately regulated by PHO4 and PHO2
S000036824 CDS YAR071W 1 225451 226854 W 2004-07-20 1996-07-31
S000000095 ORF Dubious YAR073W IMD1 chromosome 1 1 227733 228944 W 2004-07-20 1996-07-31 Nonfunctional protein with homology to IMP dehydrogenase; probable pseudogene, located close to the telomere; is not expressed at detectable levels; YAR073W and YAR075W comprise a continuous reading frame in some strains of S. cerevisiae
S000037618 CDS YAR073W 1 227733 228944 W 2004-07-20 1996-07-31
S000002145 ORF Dubious YAR075W chromosome 1 1 228835 229308 W 2004-07-20 1996-07-31 Non-functional protein with homology IMP dehydrogenase; YAR073W/IMD1 and YAR075W comprise a continuous reading frame in some strains of S. cerevisiae.
S000037740 CDS YAR075W 1 228835 229308 W 2004-07-20 1996-07-31
S000028939 X_element_core_sequence TEL01R-XC chromosome 1 1 229402 229861 W 2004-07-20 2003-09-09 Telomeric X element Core sequence on the right arm of Chromosome I, contains an ARS consensus sequence and an Abf1p binding site consensus sequence
S000035708 ARS consensus sequence TEL01R-XC 1 229442 229452 W 2004-07-20 2003-09-09
S000035709 binding_site TEL01R-XC 1 229660 229672 W 2004-07-20 2003-09-09
S000028937 telomere TEL01R chromosome 1 1 229402 230208 W 51 2004-07-20 2003-09-09 Telomeric region on the right arm of Chromosome I; composed of an X element core sequence and a short terminal stretch of telomeric repeats
S000028938 telomeric_repeat TEL01R-TR chromosome 1 1 230111 230208 W 2004-07-20 2003-09-09 Terminal stretch of telomeric repeats on the right arm of Chromosome I
S000028902 telomeric_repeat TEL10L-TR chromosome 10 10 60 1 C 2003-09-09 2003-09-09 Terminal stretch of telomeric repeats on the left arm of Chromosome X
S000028438 ARS ARS1001 chromosome 10 10 65 577 2002-12-16 2002-12-16 Autonomously Replicating Sequence
S000028665 ORF Dubious YJL225W-A chromosome 10 10 829 1311 W 2003-07-29 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized gene YJL225C
S000032490 CDS YJL225W-A 10 829 1311 W 2003-07-29 2003-07-29
S000003760 ORF Uncharacterized YJL225C chromosome 10 10 6130 466 C 1996-07-31 1996-07-31 Putative protein of unknown function; similarity to DNA helicases that are also encoded within subtelomeric Y' elements and induced in telomerase deficient survivors
S000033322 CDS YJL225C 10 4581 466 C 1996-07-31 1996-07-31
S000033321 CDS YJL225C 10 6130 4970 C 1996-07-31 1996-07-31
S000033323 intron YJL225C 10 4969 4582 C 1996-07-31 1996-07-31
S000028905 Y'_element TEL10L-YP chromosome 10 10 6931 61 C 2003-09-09 2003-09-09 Telomeric long Y' element on the left arm of Chromosome X, contains an ARS consensus sequence, a region of 36-bp repeats, and two ORFs YJL225C and YJL225W-A
S000034739 ARS consensus sequence TEL10L-YP 10 271 281 W 2003-09-09 2003-09-09
S000034740 repeat_region TEL10L-YP 10 1667 2369 W 2003-09-09 2003-09-09
S000028904 X_element_combinatorial_repeats TEL10L-XR chromosome 10 10 7304 6932 C 2003-09-09 2003-09-09 Telomeric X element combinatorial Repeat region on the left arm of Chromosome X; contains a repeat of the D type with a group I mitochondrial bI4 intron insertion; formerly called SubTelomeric Repeats
S000034737 insertion TEL10L-XR 10 7227 6998 C 2003-09-09 2003-09-09
S000028439 ARS ARS1002 chromosome 10 10 7445 7943 2002-12-16 2002-12-16 Autonomously Replicating Sequence
S000028903 X_element_core_sequence TEL10L-XC chromosome 10 10 7767 7305 C 2003-09-09 2003-09-09 Telomeric X element Core sequence on the left arm of Chromosome X, contains an ARS consensus sequence and an Abf1p binding site consensus sequence
S000034734 ARS consensus sequence TEL10L-XC 10 7729 7719 C 2003-09-09 2003-09-09
S000034735 binding_site TEL10L-XC 10 7510 7498 C 2003-09-09 2003-09-09
S000028901 telomere TEL10L chromosome 10 10 7767 1 C -125 2003-09-09 2003-09-09 Telomeric region on the left arm of Chromosome X, composed of an X element core sequence, X element combinatorial repeats, a long Y' element, and a short terminal stretch of telomeric repeats
S000003759 ORF Verified YJL223C PAU1 chromosome 10 L000001343 10 9138 8776 C 1996-07-31 1996-07-31 Member of the seripauperin multigene family encoded mainly in subtelomeric regions, active during alcoholic fermentation, regulated by anaerobiosis, negatively regulated by oxygen, repressed by heme; identical to Pau14p
S000032445 CDS YJL223C 10 9138 8776 C 1996-07-31 1996-07-31
S000028664 ORF Dubious YJL222W-B chromosome 10 10 9346 9483 W 2003-07-29 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000032489 CDS YJL222W-B 10 9346 9483 W 2003-07-29 2003-07-29
S000028663 ORF Dubious YJL222W-A chromosome 10 10 9452 9679 W 2003-07-29 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000032488 CDS YJL222W-A 10 9452 9679 W 2003-07-29 2003-07-29
S000003758 ORF Verified YJL222W VTH2 chromosome 10 10 11475 16124 W 1996-07-31 1996-07-31 Putative membrane glycoprotein with strong similarity to Vth1p and Pep1p/Vps10p, may be involved in vacuolar protein sorting
S000032381 CDS YJL222W 10 11475 16124 W 1996-07-31 1996-07-31
S000028440 ARS ARS1003 chromosome 10 10 16124 16762 2002-12-16 2002-12-16 Autonomously Replicating Sequence
S000003756 ORF Dubious YJL220W chromosome 10 10 18243 18695 W 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YJL221C/FSP2
S000032208 CDS YJL220W 10 18243 18695 W 1996-07-31 1996-07-31
S000003757 ORF Verified YJL221C FSP2 chromosome 10 L000002901 10 18536 16767 C 1996-07-31 1996-07-31 Protein of unknown function, expression is induced during nitrogen limitation
S000032237 CDS YJL221C 10 18536 16767 C 1996-07-31 1996-07-31
S000003755 ORF Verified YJL219W HXT9 chromosome 10 L000000843 10 19497 21200 W 1996-07-31 1996-07-31 Putative hexose transporter that is nearly identical to Hxt11p, has similarity to major facilitator superfamily (MFS) transporters, expression of HXT9 is regulated by transcription factors Pdr1p and Pdr3p
S000031251 CDS YJL219W 10 19497 21200 W 1996-07-31 1996-07-31
S000003754 ORF Uncharacterized YJL218W chromosome 10 10 21973 22563 W 1996-07-31 1996-07-31 Putative protein of unknown function, similar to bacterial galactoside O-acetyltransferases; induced by oleate in an OAF1/PIP2-dependent manner; promoter contains an oleate response element consensus sequence; non-essential gene
S000031119 CDS YJL218W 10 21973 22563 W 1996-07-31 1996-07-31
S000003753 ORF Verified YJL217W REE1 chromosome 10 10 23133 23729 W 1996-07-31 1996-07-31 Cytoplasmic protein involved in the regulation of enolase (ENO1); mRNA expression is induced by calcium shortage, copper deficiency (via Mac1p) and the presence of galactose (via Gal4p); mRNA expression is also regulated by the cell cycle
S000030093 CDS YJL217W 10 23133 23729 W 1996-07-31 1996-07-31
S000028441 ARS ARS1004 chromosome 10 10 23662 24158 2002-12-16 2002-12-16 Autonomously Replicating Sequence
S000003752 ORF Uncharacterized YJL216C chromosome 10 10 26086 24341 C 1996-07-31 1996-07-31 Protein of unknown function, similar to alpha-D-glucosidases; transcriptionally activated by both Pdr8p and Yrm1p, along with transporters and other genes involved in the pleiotropic drug resistance (PDR) phenomenon
S000029921 CDS YJL216C 10 26086 24341 C 1996-07-31 1996-07-31
S000003751 ORF Dubious YJL215C chromosome 10 10 26771 26412 C 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000037269 CDS YJL215C 10 26771 26412 C 1996-07-31 1996-07-31
S000003750 ORF Verified YJL214W HXT8 chromosome 10 L000000842 10 26887 28596 W 1996-07-31 1996-07-31 Protein of unknown function with similarity to hexose transporter family members, expression is induced by low levels of glucose and repressed by high levels of glucose
S000037229 CDS YJL214W 10 26887 28596 W 1996-07-31 1996-07-31
S000003749 ORF Verified YJL213W chromosome 10 10 32163 33158 W 1996-07-31 1996-07-31 Protein of unknown function that may interact with ribosomes; periodically expressed during the yeast metabolic cycle; phosphorylated in vitro by the mitotic exit network (MEN) kinase complex, Dbf2p/Mob1p
S000037130 CDS YJL213W 10 32163 33158 W 1996-07-31 1996-07-31
S000003748 ORF Verified YJL212C OPT1 GSH11|HGT1 chromosome 10 10 36249 33850 C 1996-07-31 1996-07-31 Proton-coupled oligopeptide transporter of the plasma membrane; also transports glutathione and phytochelatin; member of the OPT family
S000037000 CDS YJL212C 10 36249 33850 C 1996-07-31 1996-07-31
S000003746 ORF Verified YJL210W PEX2 PAS5|CRT1 chromosome 10 L000000422|L000003076 10 36919 37734 W 1996-07-31 1996-07-31 RING-finger peroxin, peroxisomal membrane protein with a C-terminal zinc-binding RING domain, forms translocation subcomplex with Pex10p and Pex12p which functions in peroxisomal matrix protein import
S000036292 CDS YJL210W 10 36919 37734 W 1996-07-31 1996-07-31
S000003747 ORF Dubious YJL211C chromosome 10 10 37200 36757 C 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YJL210W/PEX2
S000036326 CDS YJL211C 10 37200 36757 C 1996-07-31 1996-07-31
S000003745 ORF Verified YJL209W CBP1 chromosome 10 L000000224 10 38005 39969 W 1996-07-31 1996-07-31 Mitochondrial protein that interacts with the 5'-untranslated region of the COB mRNA and has a role in its stability and translation; found in a complex at the inner membrane along with Pet309p
S000034944 CDS YJL209W 10 38005 39969 W 1996-07-31 1996-07-31
S000003744 ORF Verified YJL208C NUC1 chromosome 10 L000001283 10 41183 40194 C 1996-07-31 1996-07-31 Major mitochondrial nuclease, has RNAse and DNA endo- and exonucleolytic activities; has roles in mitochondrial recombination, apoptosis and maintenance of polyploidy
S000033945 CDS YJL208C 10 41183 40194 C 1996-07-31 1996-07-31
S000003743 ORF Verified YJL207C LAA1 chromosome 10 10 47433 41389 C 1996-07-31 1996-07-31 AP-1 accessory protein; colocalizes with clathrin to the late-Golgi apparatus; involved in TGN-endosome transport; physically interacts with AP-1; similar to the mammalian p200; may interact with ribosomes; YJL207C is a non-essential gene
S000033803 CDS YJL207C 10 47433 41389 C 1996-07-31 1996-07-31
S000003741 ORF Uncharacterized YJL206C chromosome 10 10 49935 47659 C 1996-07-31 1996-07-31 Putative protein of unknown function; similar to transcriptional regulators from the Zn[2]-Cys[6] binuclear cluster protein family; mRNA is weakly cell cycle regulated, peaking in S phase; induced rapidly upon MMS treatment
S000033077 CDS YJL206C 10 49935 47659 C 1996-07-31 1996-07-31
S000003742 ORF Verified YJL205C NCE101 YJL205C-A|YJL206C-A|NCE1 chromosome 10 L000003097 10 50443 50139 C 1996-07-31 1996-07-31 Protein of unknown function, involved in secretion of proteins that lack classical secretory signal sequences
S000034430 CDS YJL205C 10 50268 50139 C 1996-07-31 1996-07-31
S000034429 CDS YJL205C 10 50443 50412 C 1996-07-31 1996-07-31
S000034431 intron YJL205C 10 50411 50269 C 1996-07-31 1996-07-31
S000003740 ORF Verified YJL204C RCY1 chromosome 10 10 53151 50629 C 1996-07-31 1996-07-31 F-box protein involved in recycling plasma membrane proteins internalized by endocytosis; localized to sites of polarized growth
S000032878 CDS YJL204C 10 53151 50629 C 1996-07-31 1996-07-31
S000003739 ORF Verified YJL203W PRP21 SPP91 chromosome 10 L000001507 10 53341 54183 W 1996-07-31 1996-07-31 Subunit of the SF3a splicing factor complex, required for spliceosome assembly
S000032839 CDS YJL203W 10 53341 54183 W 1996-07-31 1996-07-31
S000003738 ORF Dubious YJL202C chromosome 10 10 54290 53943 C 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps 3' end of essential PRP21 gene encoding a subunit of the SF3a splicing factor complex
S000031876 CDS YJL202C 10 54290 53943 C 1996-07-31 1996-07-31
S000003737 ORF Verified YJL201W ECM25 chromosome 10 L000003897 10 54379 56178 W 1996-07-31 1996-07-31 Non-essential protein of unknown function; promoter contains a consensus binding sequence for factor Abf1p
S000031819 CDS YJL201W 10 54379 56178 W 1996-07-31 1996-07-31
S000003736 ORF Verified YJL200C ACO2 chromosome 10 10 58813 56444 C 1996-07-31 1996-07-31 Putative mitochondrial aconitase isozyme; similarity to Aco1p, an aconitase required for the TCA cycle; expression induced during growth on glucose, by amino acid starvation via Gcn4p, and repressed on ethanol
S000031641 CDS YJL200C 10 58813 56444 C 1996-07-31 1996-07-31
S000006743 tRNA tT(AGU)J chromosome 10 L000003628 10 59172 59100 C 2000-05-19 2000-05-19 tRNA-Thr
S000032173 noncoding_exon tT(AGU)J 10 59172 59100 C 2000-05-19 2000-05-19
S000007027 long_terminal_repeat YJLWdelta1 chromosome 10 10 59504 59783 W 2000-05-19 2000-05-19 Ty1 LTR
S000003735 ORF Dubious YJL199C MBB1 chromosome 10 10 60181 59855 C 1996-07-31 1996-07-31 Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; protein detected in large-scale protein-protein interaction studies
S000035098 CDS YJL199C 10 60181 59855 C 1996-07-31 1996-07-31
S000003734 ORF Verified YJL198W PHO90 chromosome 10 10 60843 63488 W 1996-07-31 1996-07-31 Low-affinity phosphate transporter; deletion of pho84, pho87, pho89, pho90, and pho91 causes synthetic lethality; transcription independent of Pi and Pho4p activity; overexpression results in vigorous growth
S000034201 CDS YJL198W 10 60843 63488 W 1996-07-31 1996-07-31
S000003733 ORF Verified YJL197W UBP12 chromosome 10 L000003033 10 63804 67568 W 1996-07-31 1996-07-31 Ubiquitin carboxyl-terminal hydrolase, ubiquitin-specific protease present in the nucleus and cytoplasm that cleaves ubiquitin from ubiquitinated proteins
S000034104 CDS YJL197W 10 63804 67568 W 1996-07-31 1996-07-31
S000028839 ORF Dubious YJL197C-A chromosome 10 10 66085 65804 C 2003-07-29 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL197C/UBP12
S000034494 CDS YJL197C-A 10 66085 65804 C 2003-07-29 2003-07-29
S000028442 ARS ARS1005 chromosome 10 10 67468 67949 2002-12-16 2002-12-16 Autonomously Replicating Sequence
S000003732 ORF Verified YJL196C ELO1 chromosome 10 L000003442 10 68781 67849 C 1996-07-31 1996-07-31 Elongase I, medium-chain acyl elongase, catalyzes carboxy-terminal elongation of unsaturated C12-C16 fatty acyl-CoAs to C16-C18 fatty acids
S000033953 CDS YJL196C 10 68781 67849 C 1996-07-31 1996-07-31
S000003730 ORF Verified YJL194W CDC6 chromosome 10 L000000246 10 69337 70878 W -124 1996-07-31 1996-07-31 Essential ATP-binding protein required for DNA replication, component of the pre-replicative complex (pre-RC) which requires ORC to associate with chromatin and is in turn required for Mcm2-7p DNA association; homologous to S. pombe Cdc18p
S000033118 CDS YJL194W 10 69337 70878 W 1996-07-31 1996-07-31
S000003731 ORF Dubious YJL195C chromosome 10 10 69941 69240 C 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YJL194W/CDC6
S000033155 CDS YJL195C 10 69941 69240 C 1996-07-31 1996-07-31
S000003729 ORF Uncharacterized YJL193W chromosome 10 10 71365 72573 W 1996-07-31 1996-07-31 Putative protein of unknown function, predicted to encode a triose phosphate transporter subfamily member based on phylogenetic analysis; similar to YOR307C/SLY41; deletion mutant has a respiratory growth defect
S000033028 CDS YJL193W 10 71365 72573 W 1996-07-31 1996-07-31
S000003728 ORF Verified YJL192C SOP4 chromosome 10 10 73413 72709 C 1996-07-31 1996-07-31 ER-membrane protein; suppressor of pma1-7, deletion of SOP4 slows down the export of wild-type Pma1p and Pma1-7 from the ER
S000032055 CDS YJL192C 10 73413 72709 C 1996-07-31 1996-07-31
S000003727 ORF Verified YJL191W RPS14B CRY2 chromosome 10 L000000424 10 73786 74610 W 1996-07-31 1996-07-31 Ribosomal protein 59 of the small subunit, required for ribosome assembly and 20S pre-rRNA processing; mutations confer cryptopleurine resistance; nearly identical to Rps14Ap and similar to E. coli S11 and rat S14 ribosomal proteins
S000032004 CDS YJL191W 10 73786 73795 W 1996-07-31 1996-07-31
S000032005 CDS YJL191W 10 74204 74610 W 1996-07-31 1996-07-31
S000032006 intron YJL191W 10 73796 74203 W 1996-07-31 1996-07-31
S000003726 ORF Verified YJL190C RPS22A RPS24 chromosome 10 L000003150|L000001760 10 75301 74909 C 1996-07-31 1996-07-31 Protein component of the small (40S) ribosomal subunit; nearly identical to Rps22Bp and has similarity to E. coli S8 and rat S15a ribosomal proteins
S000031736 CDS YJL190C 10 75301 74909 C 1996-07-31 1996-07-31
S000003725 ORF Verified YJL189W RPL39 SPB2|RPL46|PUB2 chromosome 10 L000001737 10 75932 76473 W 1996-07-31 1996-07-31 Protein component of the large (60S) ribosomal subunit, has similarity to rat L39 ribosomal protein; required for ribosome biogenesis; loss of both Rpl31p and Rpl39p confers lethality; also exhibits genetic interactions with SIS1 and PAB1
S000030844 CDS YJL189W 10 75932 75937 W 1996-07-31 1996-07-31
S000030845 CDS YJL189W 10 76324 76473 W 1996-07-31 1996-07-31
S000030846 intron YJL189W 10 75938 76323 W 1996-07-31 1996-07-31
S000003724 ORF Dubious YJL188C BUD19 chromosome 10 10 76509 76201 C 1996-07-31 1996-07-31 Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 88% of ORF overlaps the verified gene RPL39; diploid mutant displays a weak budding pattern phenotype in a systematic assay
S000037873 CDS YJL188C 10 76509 76201 C 1996-07-31 1996-07-31
S000003723 ORF Verified YJL187C SWE1 WEE1 chromosome 10 L000002248 10 79261 76802 C 1996-07-31 1996-07-31 Protein kinase that regulates the G2/M transition by inhibition of Cdc28p kinase activity; localizes to the nucleus and to the daughter side of the mother-bud neck; homolog of S. pombe Wee1p; potential Cdc28p substrate
S000037770 CDS YJL187C 10 79261 76802 C 1996-07-31 1996-07-31
S000003722 ORF Verified YJL186W MNN5 chromosome 10 L000004918 10 80153 81913 W 1996-07-31 1996-07-31 Alpha-1,2-mannosyltransferase, responsible for addition of the second alpha-1,2-linked mannose of the branches on the mannan backbone of oligosaccharides, localizes to an early Golgi compartment
S000037744 CDS YJL186W 10 80153 81913 W 1996-07-31 1996-07-31
S000003721 ORF Uncharacterized YJL185C chromosome 10 10 82974 82093 C 1996-07-31 1996-07-31 Putative protein of unknown function; mRNA is weakly cell cycle regulated, peaking in G2 phase; YJL185C is a non-essential gene
S000036951 CDS YJL185C 10 82974 82093 C 1996-07-31 1996-07-31
S000003720 ORF Verified YJL184W GON7 PCC2|LDB6 chromosome 10 10 83446 83817 W 1996-07-31 1996-07-31 Protein proposed to be involved in the modification of N-linked oligosaccharides, osmotic stress response, telomere uncapping and elongation, transcription; component of the EKC/KEOPS protein complex with Kae1p, Cgi121p, Pcc1p, and Bud32p
S000036918 CDS YJL184W 10 83446 83817 W 1996-07-31 1996-07-31
S000003719 ORF Verified YJL183W MNN11 chromosome 10 L000004260 10 84066 85334 W 1996-07-31 1996-07-31 Subunit of a Golgi mannosyltransferase complex that also contains Anp1p, Mnn9p, Mnn10p, and Hoc1p, and mediates elongation of the polysaccharide mannan backbone; has homology to Mnn10p
S000036862 CDS YJL183W 10 84066 85334 W 1996-07-31 1996-07-31
S000003717 ORF Uncharacterized YJL181W chromosome 10 10 85658 87493 W 1996-07-31 1996-07-31 Putative protein of unknown function; expression is cell-cycle regulated as shown by microarray analysis
S000035872 CDS YJL181W 10 85658 87493 W 1996-07-31 1996-07-31
S000003718 ORF Dubious YJL182C chromosome 10 10 85750 85433 C 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized ORF YJL181W
S000035944 CDS YJL182C 10 85750 85433 C 1996-07-31 1996-07-31
S000003716 ORF Verified YJL180C ATP12 chromosome 10 L000000149 10 88558 87581 C 1996-07-31 1996-07-31 Conserved protein required for assembly of alpha and beta subunits into the F1 sector of mitochondrial F1F0 ATP synthase; mutation of human ATP12 reduces active ATP synthase levels and is associated with the disorder ATPAF2 deficiency
S000035717 CDS YJL180C 10 88558 87581 C 1996-07-31 1996-07-31
S000003715 ORF Verified YJL179W PFD1 GIM6 chromosome 10 L000004367 10 88785 89114 W 1996-07-31 1996-07-31 Subunit of heterohexameric prefoldin, which binds cytosolic chaperonin and transfers target proteins to it; involved in the biogenesis of actin and of alpha- and gamma-tubulin
S000034696 CDS YJL179W 10 88785 89114 W 1996-07-31 1996-07-31
S000003714 ORF Verified YJL178C ATG27 ETF1 chromosome 10 10 90095 89280 C 2004-02-12 2004-02-12|1996-07-31 Type I membrane protein involved in autophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway; may be involved in membrane delivery to the phagophore assembly site
S000033739 CDS YJL178C 10 90095 89280 C 2004-02-12 2004-02-12|1996-07-31
S000003713 ORF Verified YJL177W RPL17B chromosome 10 L000004457 10 90784 91655 W 2004-02-12 1996-07-31 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl17Ap and has similarity to E. coli L22 and rat L17 ribosomal proteins
S000033683 CDS YJL177W 10 90784 91092 W 2004-02-12 1996-07-31
S000033684 CDS YJL177W 10 91410 91655 W 2004-02-12 1996-07-31
S000033685 intron YJL177W 10 91093 91409 W 2004-02-12 1996-07-31
S000003711 ORF Dubious YJL175W chromosome 10 10 94047 94559 W 2004-02-12 1996-07-31 Dubious open reading frame unlikely to encode a functional protein; deletion confers resistance to cisplatin, hypersensitivity to 5-fluorouracil, and growth defect at high pH with high calcium; overlaps gene for SWI3 transcription factor
S000033497 CDS YJL175W 10 94047 94559 W 2004-02-12 1996-07-31
S000003712 ORF Verified YJL176C SWI3 TYE2 chromosome 10 L000002251 10 94528 92051 C 2004-02-12 1996-07-31 Subunit of the SWI/SNF chromatin remodeling complex, which regulates transcription by remodeling chromosomes; required for transcription of many genes, including ADH1, ADH2, GAL1, HO, INO1 and SUC2
S000033535 CDS YJL176C 10 94528 92051 C 2004-02-12 1996-07-31
S000003710 ORF Verified YJL174W KRE9 chromosome 10 L000000916 10 95090 95920 W -111.26 2004-02-12 1996-07-31 Glycoprotein involved in cell wall beta-glucan assembly; null mutation leads to severe growth defects, aberrant multibudded morphology, and mating defects
S000032753 CDS YJL174W 10 95090 95920 W 2004-02-12 1996-07-31
S000003709 ORF Verified YJL173C RFA3 RPA3 chromosome 10 L000001622 10 96527 96159 C 2004-02-12 1996-07-31 Subunit of heterotrimeric Replication Protein A (RPA), which is a highly conserved single-stranded DNA binding protein involved in DNA replication, repair, and recombination
S000032609 CDS YJL173C 10 96527 96159 C 2004-02-12 1996-07-31
S000003708 ORF Verified YJL172W CPS1 chromosome 10 L000000403 10 97731 99461 W 2004-02-12 1996-07-31 Vacuolar carboxypeptidase yscS; expression is induced under low-nitrogen conditions
S000032538 CDS YJL172W 10 97731 99461 W 2004-02-12 1996-07-31
S000028443 ARS ARS1006 chromosome 10 10 99361 99797 2004-02-12 2002-12-16 Autonomously Replicating Sequence
S000003707 ORF Verified YJL171C chromosome 10 10 100888 99698 C 2004-02-12 1996-07-31 GPI-anchored cell wall protein of unknown function; induced in response to cell wall damaging agents and by mutations in genes involved in cell wall biogenesis; sequence similarity to YBR162C/TOS1, a covalently bound cell wall protein
S000031523 CDS YJL171C 10 100888 99698 C 2004-02-12 1996-07-31
S000003706 ORF Verified YJL170C ASG7 chromosome 10 L000004055 10 101773 101144 C 2006-01-18 1996-07-31|2006-01-18 Protein that regulates signaling from a G protein beta subunit Ste4p and its relocalization within the cell; specific to a-cells and induced by alpha-factor
S000031474 CDS YJL170C 10 101773 101144 C 2006-01-18 1996-07-31|2006-01-18
S000003705 ORF Dubious YJL169W chromosome 10 10 102093 102461 W 2006-01-18 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YJL168C/SET2
S000030718 CDS YJL169W 10 102093 102461 W 2006-01-18 1996-07-31
S000003704 ORF Verified YJL168C SET2 EZL1 chromosome 10 L000003090 10 104422 102221 C 2006-01-18 1996-07-31 Histone methyltransferase with a role in transcriptional elongation, methylates a lysine residue of histone H3; associates with the C-terminal domain of Rpo21p; histone methylation activity is regulated by phosphorylation status of Rpo21p
S000030590 CDS YJL168C 10 104422 102221 C 2006-01-18 1996-07-31
S000003703 ORF Verified YJL167W ERG20 FPP1|FDS1|BOT3 chromosome 10 L000000579 10 105008 106066 W 2006-01-18 1996-07-31 Farnesyl pyrophosphate synthetase, has both dimethylallyltranstransferase and geranyltranstransferase activities; catalyzes the formation of C15 farnesyl pyrophosphate units for isoprenoid and sterol biosynthesis
S000030519 CDS YJL167W 10 105008 106066 W 2006-01-18 1996-07-31
S000003702 ORF Verified YJL166W QCR8 COR5 chromosome 10 L000001548 10 106428 106712 W 2006-01-18 1996-07-31 Subunit 8 of ubiquinol cytochrome-c reductase complex, which is a component of the mitochondrial inner membrane electron transport chain; oriented facing the intermembrane space; expression is regulated by Abf1p and Cpf1p
S000030370 CDS YJL166W 10 106428 106712 W 2006-01-18 1996-07-31
S000003701 ORF Verified YJL165C HAL5 chromosome 10 L000000751 10 109455 106888 C 2006-01-18 1996-07-31 Putative protein kinase; overexpression increases sodium and lithium tolerance, whereas gene disruption increases cation and low pH sensitivity and impairs potassium uptake, suggesting a role in regulation of Trk1p and/or Trk2p transporters
S000037517 CDS YJL165C 10 109455 106888 C 2006-01-18 1996-07-31
S000003700 ORF Verified YJL164C TPK1 SRA3|PKA1 chromosome 10 L000002045 10 111153 109960 C -106 2006-01-18 1996-07-31 cAMP-dependent protein kinase catalytic subunit; promotes vegetative growth in response to nutrients via the Ras-cAMP signaling pathway; inhibited by regulatory subunit Bcy1p in the absence of cAMP; partially redundant with Tpk2p and Tpk3p
S000037409 CDS YJL164C 10 111153 109960 C 2006-01-18 1996-07-31
S000028444 ARS ARS1007 chromosome 10 10 113229 113830 2006-01-18 2002-12-16 Autonomously Replicating Sequence
S000003699 ORF Uncharacterized YJL163C chromosome 10 10 113329 111662 C 2006-01-18 1996-07-31 Putative protein of unknown function
S000036682 CDS YJL163C 10 113329 111662 C 2006-01-18 1996-07-31
S000003698 ORF Verified YJL162C JJJ2 chromosome 10 10 115625 113874 C 2006-01-18 1996-07-31|2006-01-18 Protein of unknown function, contains a J-domain, which is a region with homology to the E. coli DnaJ protein
S000036580 CDS YJL162C 10 115625 113874 C 2006-01-18 1996-07-31|2006-01-18
S000006557 tRNA tE(UUC)J chromosome 10 L000003627 10 116006 115935 C 2006-01-18 2000-05-19 tRNA-Glu; thiolation of uridine at wobble position (34) requires Ncs6p; target of K. lactis zymocin
S000035988 noncoding_exon tE(UUC)J 10 116006 115935 C 2006-01-18 2000-05-19
S000003697 ORF Uncharacterized YJL161W FMP33 chromosome 10 10 117241 117783 W 2006-01-18 1996-07-31 Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
S000036525 CDS YJL161W 10 117241 117783 W 2006-01-18 1996-07-31
S000003696 ORF Uncharacterized YJL160C chromosome 10 10 118821 117958 C 2006-01-18 2004-02-19|1996-07-31 Putative protein of unknown function; member of the PIR (proteins with internal repeats) family of cell wall proteins; non-essential gene that is required for sporulation; mRNA is weakly cell cycle regulated, peaking in mitosis
S000035585 CDS YJL160C 10 118821 117958 C 2006-01-18 2004-02-19|1996-07-31
S000003695 ORF Verified YJL159W HSP150 PIR2|ORE1|CCW7 chromosome 10 L000000824|L000001442 10 120445 121686 W 2006-10-04 2004-02-18|1996-07-31|2006-10-04 O-mannosylated heat shock protein that is secreted and covalently attached to the cell wall via beta-1,3-glucan and disulfide bridges; required for cell wall stability; induced by heat shock, oxidative stress, and nitrogen limitation
S000035769 CDS YJL159W 10 120445 121686 W 2006-10-04 2004-02-18|1996-07-31|2006-10-04
S000003694 ORF Verified YJL158C CIS3 CCW5|PIR4|CCW11 chromosome 10 S000029072|L000003951|L000004553 10 122944 122261 C 2006-10-04 1996-07-31 Mannose-containing glycoprotein constituent of the cell wall; member of the PIR (proteins with internal repeats) family
S000035606 CDS YJL158C 10 122944 122261 C 2006-10-04 1996-07-31
S000003693 ORF Verified YJL157C FAR1 chromosome 10 L000000600 10 126324 123832 C 2006-10-04 1996-07-31 Cyclin-dependent kinase inhibitor that mediates cell cycle arrest in response to pheromone; also forms a complex with Cdc24p, Ste4p, and Ste18p that may specify the direction of polarized growth during mating; potential Cdc28p substrate
S000035524 CDS YJL157C 10 126324 123832 C 2006-10-04 1996-07-31
S000007613 ORF Dubious YJL156W-A chromosome 10 10 126600 126821 W 2006-10-04 2001-02-26 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000037190 CDS YJL156W-A 10 126600 126821 W 2006-10-04 2001-02-26
S000003692 ORF Verified YJL156C SSY5 chromosome 10 L000003187 10 128948 126849 C 2009-02-18 1996-07-31|2009-02-18 Serine protease of SPS plasma membrane amino acid sensor system (Ssy1p-Ptr3p-Ssy5p); contains an inhibitory domain that dissociates in response to extracellular amino acids, freeing a catalytic domain to activate transcription factor Stp1p
S000034507 CDS YJL156C 10 128948 126849 C 2009-02-18 1996-07-31|2009-02-18
S000003691 ORF Verified YJL155C FBP26 chromosome 10 L000000606 10 130639 129281 C 2009-02-18 1996-07-31 Fructose-2,6-bisphosphatase, required for glucose metabolism
S000034402 CDS YJL155C 10 130639 129281 C 2009-02-18 1996-07-31
S000003690 ORF Verified YJL154C VPS35 VPT7|GRD9 chromosome 10 L000002477 10 133931 131097 C -102 2009-02-18 1996-07-31 Endosomal subunit of membrane-associated retromer complex required for retrograde transport; receptor that recognizes retrieval signals on cargo proteins, forms subcomplex with Vps26p and Vps29p that selects cargo proteins for retrieval
S000034312 CDS YJL154C 10 133931 131097 C 2009-02-18 1996-07-31
S000003689 ORF Verified YJL153C INO1 APR1 chromosome 10 L000000867 10 135929 134328 C -101 2009-02-18 2003-09-22|1996-07-31 Inositol 1-phosphate synthase, involved in synthesis of inositol phosphates and inositol-containing phospholipids; transcription is coregulated with other phospholipid biosynthetic genes by Ino2p and Ino4p, which bind the UASINO DNA element
S000033398 CDS YJL153C 10 135929 134328 C 2009-02-18 2003-09-22|1996-07-31
S000003688 ORF Dubious YJL152W chromosome 10 10 136170 136529 W 2009-02-18 1996-07-31 Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000033364 CDS YJL152W 10 136170 136529 W 2009-02-18 1996-07-31
S000003687 ORF Verified YJL151C SNA3 chromosome 10 10 136769 136368 C 2009-02-18 1996-07-31 Integral membrane protein localized to vacuolar intralumenal vesicles, computational analysis of large-scale protein-protein interaction data suggests a possible role in either cell wall synthesis or protein-vacuolar targeting
S000033267 CDS YJL151C 10 136769 136368 C 2009-02-18 1996-07-31
S000003686 ORF Dubious YJL150W chromosome 10 10 137119 137421 W 2009-02-18 1996-07-31 Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000033233 CDS YJL150W 10 137119 137421 W 2009-02-18 1996-07-31
S000003685 ORF Verified YJL149W DAS1 chromosome 10 10 137375 139366 W 2009-02-18 1996-07-31 Putative SCF ubiquitin ligase F-box protein; interacts physically with both Cdc53p and Skp1 and genetically with CDC34; similar to putative F-box protein YDR131C
S000032472 CDS YJL149W 10 137375 139366 W 2009-02-18 1996-07-31
S000006508 snoRNA snR128 SNR128 chromosome 10 L000001975 10 139687 139562 C 2009-02-18 2000-05-19 C/D box small nucleolar RNA (snoRNA), referred to as U14; essential gene required for cleavage of 35S primary rRNA transcript to release the precursor to the 18S rRNA; guides 2'-O-methylation of small subunit (SSU) rRNA at position C414
S000035225 noncoding_exon snR128 10 139687 139562 C 2009-02-18 2000-05-19
S000006509 snoRNA snR190 SNR190 chromosome 10 L000001977 10 139946 139757 C 2009-02-18 2000-05-19 C/D box small nucleolar RNA (snoRNA) predicted to guide 2'-O-methylation of large subunit (LSU) rRNA at position G2395 but not shown to be active
S000030414 noncoding_exon snR190 10 139946 139757 C 2009-02-18 2000-05-19
S000003684 ORF Verified YJL148W RPA34 chromosome 10 L000004132 10 140433 141134 W 2009-02-18 1996-07-31 RNA polymerase I subunit A34.5
S000032342 CDS YJL148W 10 140433 141134 W 2009-02-18 1996-07-31
S000003683 ORF Uncharacterized YJL147C chromosome 10 10 142563 141415 C 2009-02-18 1996-07-31 Mitochondrial protein of unknown function; homozygous diploid deletion strain has a sporulation defect characterized by elevated dityrosine in the soluble fraction; expression induced by calcium shortage; YJL147W is a non-essential gene
S000031289 CDS YJL147C 10 142563 141415 C 2009-02-18 1996-07-31
S000003682 ORF Verified YJL146W IDS2 chromosome 10 L000000853 10 143288 144697 W 2009-02-18 1996-07-31 Protein involved in modulation of Ime2p activity during meiosis, appears to act indirectly to promote Ime2p-mediated late meiotic functions; found in growing cells and degraded during sporulation
S000031249 CDS YJL146W 10 143288 144697 W 2009-02-18 1996-07-31
S000003681 ORF Verified YJL145W SFH5 chromosome 10 10 145156 146040 W 2009-02-18 1996-07-31 Non-classical phosphatidylinositol transfer protein (PITP); exhibits PI- but not PC-transfer activity; localizes to the peripheral endoplasmic reticulum, cytosol and microsomes; similar to Sec14p
S000031116 CDS YJL145W 10 145156 146040 W 2009-02-18 1996-07-31
S000003680 ORF Uncharacterized YJL144W chromosome 10 10 146355 146669 W 2009-02-18 1996-07-31 Cytoplasmic hydrophilin of unknown function, possibly involved in the dessication response; expression induced by osmotic stress, starvation and during stationary phase; GFP-fusion protein is induced by the DNA-damaging agent MMS
S000030090 CDS YJL144W 10 146355 146669 W 2009-02-18 1996-07-31
S000003679 ORF Verified YJL143W TIM17 SMS1|MPI2|MIM17 chromosome 10 L000001139 10 147097 147573 W 2009-02-18 1996-07-31 Essential subunit of the Translocase of the Inner Mitochondrial membrane (TIM23 complex); with Tim23p, contributes to the architecture and function of the import channel; may link the import motor to the core TIM23 complex
S000029979 CDS YJL143W 10 147097 147573 W 2009-02-18 1996-07-31
S000003678 ORF Dubious YJL142C IRC9 chromosome 10 10 148207 147815 C 2009-02-18 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified gene YJL141C; null mutant displays increased levels of spontaneous Rad52p foci
S000037267 CDS YJL142C 10 148207 147815 C 2009-02-18 1996-07-31
S000003677 ORF Verified YJL141C YAK1 chromosome 10 L000002490 10 150386 147963 C 2009-02-18 1996-07-31 Serine-threonine protein kinase that is part of a glucose-sensing system involved in growth control in response to glucose availability; translocates from the cytoplasm to the nucleus and phosphorylates Pop2p in response to a glucose signal
S000037175 CDS YJL141C 10 150386 147963 C 2009-02-18 1996-07-31
S000003676 ORF Verified YJL140W RPB4 CTF15 chromosome 10 L000001678 10 150957 151622 W 2009-02-18 1996-07-31 RNA polymerase II subunit B32; forms two subunit dissociable complex with Rpb7p; involved recruitment of 3'-end processing factors to transcribing RNA polymerase II complex and in export of mRNA to cytoplasm under stress conditions
S000037123 CDS YJL140W 10 150957 151622 W 2009-02-18 1996-07-31
S000003675 ORF Verified YJL139C YUR1 chromosome 10 L000002566 10 152995 151709 C -90.66 2009-02-18 1996-07-31 Mannosyltransferase of the KTR1 family, involved in protein N-glycosylation; located in the Golgi apparatus
S000035317 CDS YJL139C 10 152995 151709 C 2009-02-18 1996-07-31
S000003674 ORF Verified YJL138C TIF2 chromosome 10 L000002303 10 154687 153500 C -92 2009-02-18 1996-07-31 Translation initiation factor eIF4A, identical to Tif1p; DEA(D/H)-box RNA helicase that couples ATPase activity to RNA binding and unwinding; forms a dumbbell structure of two compact domains connected by a linker; interacts with eIF4G
S000035154 CDS YJL138C 10 154687 153500 C 2009-02-18 1996-07-31
S000003673 ORF Verified YJL137C GLG2 chromosome 10 L000003159 10 156123 154981 C 2009-02-18 1996-07-31 Self-glucosylating initiator of glycogen synthesis, also glucosylates n-dodecyl-beta-D-maltoside; similar to mammalian glycogenin
S000035008 CDS YJL137C 10 156123 154981 C 2009-02-18 1996-07-31
S000028806 ORF Uncharacterized YJL136W-A chromosome 10 10 156165 156248 W 2009-02-18 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; identified by SAGE
S000033589 CDS YJL136W-A 10 156165 156248 W 2009-02-18 2003-07-29
S000003672 ORF Verified YJL136C RPS21B chromosome 10 L000003031 10 157269 156546 C 2009-02-18 1996-07-31 Protein component of the small (40S) ribosomal subunit; nearly identical to Rps21Ap and has similarity to rat S21 ribosomal protein
S000034084 CDS YJL136C 10 156785 156546 C 2009-02-18 1996-07-31
S000034083 CDS YJL136C 10 157269 157246 C 2009-02-18 1996-07-31
S000034085 intron YJL136C 10 157245 156786 C 2009-02-18 1996-07-31
S000003671 ORF Dubious YJL135W chromosome 10 10 157873 158190 W 2009-02-18 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified genes YJL134W/LCB3
S000034027 CDS YJL135W 10 157873 158190 W 2009-02-18 1996-07-31
S000003670 ORF Verified YJL134W LCB3 YSR2|LBP1 chromosome 10 L000004101 10 158184 159413 W 2009-02-18 1996-07-31 Long-chain base-1-phosphate phosphatase with specificity for dihydrosphingosine-1-phosphate, regulates ceramide and long-chain base phosphates levels, involved in incorporation of exogenous long chain bases in sphingolipids
S000033888 CDS YJL134W 10 158184 159413 W 2009-02-18 1996-07-31
S000028805 ORF Uncharacterized YJL133C-A chromosome 10 10 159843 159619 C 2009-02-18 2003-07-29 Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
S000033587 CDS YJL133C-A 10 159843 159619 C 2009-02-18 2003-07-29
S000003669 ORF Verified YJL133W MRS3 chromosome 10 L000001179 10 160615 161559 W 2009-02-18 1996-07-31 Iron transporter that mediates Fe2+ transport across the inner mitochondrial membrane; mitochondrial carrier family member, similar to and functionally redundant with Mrs4p; active under low-iron conditions; may transport other cations
S000033746 CDS YJL133W 10 160615 161559 W 2009-02-18 1996-07-31
S000003668 ORF Uncharacterized YJL132W chromosome 10 10 161910 164162 W 2009-02-18 1996-07-31 Putative protein of unknown function; localizes to the membrane fraction; possible Zap1p-regulated target gene induced by zinc deficiency; YJL132W is a non-essential gene
S000033018 CDS YJL132W 10 161910 164162 W 2009-02-18 1996-07-31
S000003667 ORF Verified YJL131C AIM23 chromosome 10 10 165344 164274 C 2009-02-18 1996-07-31 Putative protein of unknown function; the authentic non-tagged protein is detected in highly purified mitochondria; null mutant is viable, displays severe respiratory growth defect and elevated frequency of mitochondrial genome loss
S000032877 CDS YJL131C 10 165344 164274 C 2009-02-18 1996-07-31
S000003666 ORF Verified YJL130C URA2 chromosome 10 L000002431 10 172363 165719 C -89 2009-02-18 1996-07-31 Bifunctional carbamoylphosphate synthetase (CPSase)-aspartate transcarbamylase (ATCase), catalyzes the first two enzymatic steps in the de novo biosynthesis of pyrimidines; both activities are subject to feedback inhibition by UTP
S000031969 CDS YJL130C 10 172363 165719 C 2009-02-18 1996-07-31
S000122104 five_prime_UTR_intron YJL130C 10 172748 172429 C 2009-02-18 2007-04-04
S000003665 ORF Verified YJL129C TRK1 chromosome 10 L000002334 10 177302 173595 C 2009-02-18 1996-07-31 Component of the Trk1p-Trk2p potassium transport system; 180 kDa high affinity potassium transporter; phosphorylated in vivo and interacts physically with the phosphatase Ppz1p, suggesting Trk1p acitivy is regulated by phosphorylation
S000032672 CDS YJL129C 10 177302 173595 C 2009-02-18 1996-07-31
S000003664 ORF Verified YJL128C PBS2 SSK4|SFS4|HOG4 chromosome 10 L000001346|L000001874 10 180099 178093 C -85 2009-02-18 1996-07-31 MAP kinase kinase that plays a pivotal role in the osmosensing signal-transduction pathway, activated under severe osmotic stress; plays a role in regulating Ty1 transposition
S000031693 CDS YJL128C 10 180099 178093 C 2009-02-18 1996-07-31
S000007612 ORF Dubious YJL127W-A YJL127W-B chromosome 10 10 180190 180306 W 2009-02-18 2001-02-26 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000037189 CDS YJL127W-A 10 180190 180306 W 2009-02-18 2001-02-26
S000028522 ORF Uncharacterized YJL127C-B YJL127C-A chromosome 10 10 181706 181548 C 2009-02-18 2003-07-29 Putative protein of unknown function; identified based on homology to the filamentous fungus, Ashbya gossypii
S000030318 CDS YJL127C-B 10 181706 181548 C 2009-02-18 2003-07-29
S000003663 ORF Verified YJL127C SPT10 SUD1|CRE1 chromosome 10 L000002035 10 184217 182295 C -87 2009-02-18 1996-07-31 Putative histone acetylase, sequence-specific activator of histone genes, binds specifically and highly cooperatively to pairs of UAS elements in core histone promoters, functions at or near the TATA box
S000031537 CDS YJL127C 10 184217 182295 C 2009-02-18 1996-07-31
S000003662 ORF Verified YJL126W NIT2 chromosome 10 L000004212 10 184498 185421 W 2009-02-18 1996-07-31 Nit protein, one of two proteins in S. cerevisiae with similarity to the Nit domain of NitFhit from fly and worm and to the mouse and human Nit protein which interacts with the Fhit tumor suppressor; nitrilase superfamily member
S000031498 CDS YJL126W 10 184498 185421 W 2009-02-18 1996-07-31
S000003661 ORF Verified YJL125C GCD14 TRM61 chromosome 10 L000002902 10 186676 185525 C 2009-02-18 1996-07-31 Subunit of tRNA (1-methyladenosine) methyltransferase, with Gcd10p, required for the modification of the adenine at position 58 in tRNAs, especially tRNAi-Met; first identified as a negative regulator of GCN4 expression
S000030509 CDS YJL125C 10 186676 185525 C 2009-02-18 1996-07-31
S000003660 ORF Verified YJL124C LSM1 SPB8 chromosome 10 L000004427 10 187642 187124 C 2009-02-18 1996-07-31 Lsm (Like Sm) protein; forms heteroheptameric complex (with Lsm2p, Lsm3p, Lsm4p, Lsm5p, Lsm6p, and Lsm7p) involved in degradation of cytoplasmic mRNAs
S000030388 CDS YJL124C 10 187642 187124 C 2009-02-18 1996-07-31
S000003659 ORF Verified YJL123C MTC1 chromosome 10 10 189438 188002 C 2009-02-18 1996-07-31 Protein of unknown function that may interact with ribosomes; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and to COPI-coated vesicles (early Golgi); mtc1 is synthetically lethal with cdc13-1
S000030206 CDS YJL123C 10 189438 188002 C 2009-02-18 1996-07-31
S000003658 ORF Verified YJL122W ALB1 chromosome 10 10 189714 190241 W 2009-02-18 1996-07-31 Shuttling pre-60S factor; involved in the biogenesis of ribosomal large subunit; interacts directly with Arx1p; responsible for Tif6p recycling defects in absence of Rei1p
S000037544 CDS YJL122W 10 189714 190241 W 2009-02-18 1996-07-31
S000003656 ORF Dubious YJL120W chromosome 10 10 191020 191343 W 2009-02-18 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YJL121C/RPE1; deletion confers sensitivity to GSAO
S000037326 CDS YJL120W 10 191020 191343 W 2009-02-18 1996-07-31
S000003657 ORF Verified YJL121C RPE1 POS18|EPI1 chromosome 10 L000004023|L000002588 10 191088 190372 C 2009-02-18 1996-07-31 D-ribulose-5-phosphate 3-epimerase, catalyzes a reaction in the non-oxidative part of the pentose-phosphate pathway; mutants are sensitive to oxidative stress
S000037363 CDS YJL121C 10 191088 190372 C 2009-02-18 1996-07-31
S000003654 ORF Verified YJL118W chromosome 10 10 191637 192296 W 2009-02-18 1996-07-31 Putative protein of unknown function; may interact with ribosomes, based on co-purification experiments; YJL18W is a non-essential gene; deletion enhances the toxicity of heterologously expressed human alpha-synuclein
S000035604 CDS YJL118W 10 191637 192296 W 2009-02-18 1996-07-31
S000003655 ORF Dubious YJL119C chromosome 10 10 191893 191570 C 2009-02-18 1996-07-31 Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000035622 CDS YJL119C 10 191893 191570 C 2009-02-18 1996-07-31
S000003653 ORF Verified YJL117W PHO86 chromosome 10 L000002945 10 192529 193464 W 2009-02-18 1996-07-31 Endoplasmic reticulum (ER) resident protein required for ER exit of the high-affinity phosphate transporter Pho84p, specifically required for packaging of Pho84p into COPII vesicles
S000035509 CDS YJL117W 10 192529 193464 W 2009-02-18 1996-07-31
S000003652 ORF Verified YJL116C NCA3 chromosome 10 L000002936 10 194871 193858 C 2009-02-18 1996-07-31 Protein that functions with Nca2p to regulate mitochondrial expression of subunits 6 (Atp6p) and 8 (Atp8p ) of the Fo-F1 ATP synthase; member of the SUN family; expression induced in cells treated with the mycotoxin patulin
S000034420 CDS YJL116C 10 194871 193858 C 2009-02-18 1996-07-31
S000003651 ORF Verified YJL115W ASF1 CIA1 chromosome 10 L000000126 10 196284 197123 W -80.06 2009-02-18 1996-07-31 Nucleosome assembly factor, involved in chromatin assembly and disassembly, anti-silencing protein that causes derepression of silent loci when overexpressed; plays a role in regulating Ty1 transposition
S000034387 CDS YJL115W 10 196284 197123 W 2009-02-18 1996-07-31
S000006514 tRNA tA(AGC)J chromosome 10 L000003626 10 197382 197310 C 2009-02-18 2000-05-19 tRNA-Ala (Ala1), one of 11 nuclear tRNA genes containing the tDNA-anticodon AGC (converted to IGC in the mature tRNA), decodes GCU and GCC codons into alanine, one of 16 nuclear tRNAs for alanine
S000032283 noncoding_exon tA(AGC)J 10 197382 197310 C 2009-02-18 2000-05-19
S000007035 long_terminal_repeat YJLWsigma1 chromosome 10 10 197398 197491 W 2009-02-18 2000-05-19 Ty3 LTR
S000007039 retrotransposon YJLWTy4-1 chromosome 10 10 197542 203767 W 2009-02-18 2000-05-19 Long Terminal Repeat (LTR) retrotransposon of the Copia (Pseudoviridae) group; contains co-transcribed genes TYA Gag and TYB Pol, encoding proteins involved in structure and function of virus-like particles, flanked by two direct repeats
S000007036 long_terminal_repeat YJLWtau1 chromosome 10 10 197542 197912 W 2009-02-18 2000-05-19 Ty4 LTR
S000003649 transposable_element_gene YJL113W chromosome 10 10 197912 203324 W 2009-02-18 1996-07-31 Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes
S000034131 CDS YJL113W 10 197912 198997 W 2009-02-18 1996-07-31
S000034132 CDS YJL113W 10 198999 203324 W 2009-02-18 1996-07-31
S000034133 plus_1_translational_frameshift YJL113W 10 198998 198998 W 2009-02-18 1996-07-31
S000003650 transposable_element_gene YJL114W chromosome 10 10 197912 199156 W 2009-02-18 1996-07-31 Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag
S000034265 CDS YJL114W 10 197912 199156 W 2009-02-18 1996-07-31
S000007037 long_terminal_repeat YJLWtau2 chromosome 10 10 203397 203767 W 2009-02-18 2000-05-19 Ty4 LTR
S000028445 ARS ARS1008 chromosome 10 10 204028 204912 2009-02-18 2002-12-16 Autonomously Replicating Sequence
S000007022 long_terminal_repeat YJLCdelta3 chromosome 10 10 204113 203782 C 2009-02-18 2000-05-19 Ty1 LTR
S000006536 tRNA tD(GUC)J1 chromosome 10 L000003605 10 204730 204801 W 2009-02-18 2000-05-19 tRNA-Asp
S000030769 noncoding_exon tD(GUC)J1 10 204730 204801 W 2009-02-18 2000-05-19
S000003648 ORF Verified YJL112W MDV1 NET2|GAG3|FIS2 chromosome 10 10 205300 207444 W 2009-02-18 1996-07-31 Peripheral protein of the cytosolic face of the mitochondrial outer membrane, required for mitochondrial fission; interacts with Fis1p and with the dynamin-related GTPase Dnm1p; contains WD repeats
S000033273 CDS YJL112W 10 205300 207444 W 2009-02-18 1996-07-31
S000003647 ORF Verified YJL111W CCT7 TCP7 chromosome 10 L000002763 10 207872 209524 W 2009-02-18 1996-07-31 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of actin and tubulins in vivo
S000033222 CDS YJL111W 10 207872 209524 W 2009-02-18 1996-07-31
S000003646 ORF Verified YJL110C GZF3 NIL2|DEH1 chromosome 10 L000002858|L000003382 10 211572 209917 C 2009-02-18 1996-07-31 GATA zinc finger protein and Dal80p homolog that negatively regulates nitrogen catabolic gene expression by competing with Gat1p for GATA site binding; function requires a repressive carbon source; dimerizes with Dal80p and binds to Tor1p
S000033132 CDS YJL110C 10 211572 209917 C 2009-02-18 1996-07-31
S000003645 ORF Verified YJL109C UTP10 chromosome 10 10 217304 211995 C 2009-02-18 1996-07-31 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA
S000032396 CDS YJL109C 10 217304 211995 C 2009-02-18 1996-07-31
S000003644 ORF Verified YJL108C PRM10 chromosome 10 10 218851 217700 C 2009-02-18 1996-07-31 Pheromone-regulated protein, proposed to be involved in mating; predicted to have 5 transmembrane segments; induced by treatment with 8-methoxypsoralen and UVA irradiation
S000032288 CDS YJL108C 10 218851 217700 C 2009-02-18 1996-07-31
S000003643 ORF Uncharacterized YJL107C chromosome 10 10 220011 218848 C 2009-02-18 1996-07-31 Putative protein of unknown function; expression is induced by activation of the HOG1 mitogen-activated signaling pathway and this induction is Hog1p/Pbs2p dependent; YJL107C and adjacent ORF, YJL108C are merged in related fungi
S000031290 CDS YJL107C 10 220011 218848 C 2009-02-18 1996-07-31
S000003642 ORF Verified YJL106W IME2 SME1 chromosome 10 L000000862 10 221385 223322 W 2009-02-18 1996-07-31 Serine/threonine protein kinase involved in activation of meiosis, associates with Ime1p and mediates its stability, activates Ndt80p; IME2 expression is positively regulated by Ime1p
S000031252 CDS YJL106W 10 221385 223322 W 2009-02-18 1996-07-31
S000003641 ORF Verified YJL105W SET4 chromosome 10 10 225050 226732 W 2009-02-18 1996-07-31 Protein of unknown function, contains a SET domain
S000031110 CDS YJL105W 10 225050 226732 W 2009-02-18 1996-07-31
S000003640 ORF Verified YJL104W PAM16 TIM16|MIA1 chromosome 10 10 227322 227771 W 2009-02-18 1996-07-31 Constituent of the import motor (PAM complex) component of the Translocase of the Inner Mitochondrial membrane (TIM23 complex); forms a 1:1 subcomplex with Pam18p and inhibits its cochaperone activity; contains a J-like domain
S000031000 CDS YJL104W 10 227322 227771 W 2009-02-18 1996-07-31
S000006501 snoRNA snR37 SNR37 chromosome 10 L000003502 10 228474 228089 C 2009-02-18 2000-05-19 H/ACA box small nucleolar RNA (snoRNA); guides pseudouridylation of large subunit (LSU) rRNA at position U2944
S000036767 noncoding_exon snR37 10 228474 228089 C 2009-02-18 2000-05-19
S000028446 ARS ARS1009 chromosome 10 10 228547 229038 2009-02-18 2002-12-16 Autonomously Replicating Sequence
S000003639 ORF Uncharacterized YJL103C GSM1 chromosome 10 10 230876 229020 C 2009-02-18 1996-07-31 Putative zinc cluster protein of unknown function; proposed to be involved in the regulation of energy metabolism, based on patterns of expression and sequence analysis
S000029933 CDS YJL103C 10 230876 229020 C 2009-02-18 1996-07-31
S000003638 ORF Verified YJL102W MEF2 chromosome 10 L000001058 10 231296 233755 W 2009-02-18 1996-07-31 Mitochondrial elongation factor involved in translational elongation
S000029898 CDS YJL102W 10 231296 233755 W 2009-02-18 1996-07-31
S000006702 tRNA tR(ACG)J chromosome 10 L000003606 10 233934 234006 W 2009-02-18 2000-05-19 tRNA-Arg (Arg2), one of 6 nuclear tRNA genes containing the tDNA-anticodon ACG (converted to ICG in the mature tRNA), decodes CGU, CGC, and probably CGA codons into arginine, one of 19 nuclear tRNAs for arginine
S000030405 noncoding_exon tR(ACG)J 10 233934 234006 W 2009-02-18 2000-05-19
S000003637 ORF Verified YJL101C GSH1 chromosome 10 L000000735 10 236351 234315 C 2009-02-18 1996-07-31 Gamma glutamylcysteine synthetase catalyzes the first step in glutathione (GSH) biosynthesis; expression induced by oxidants, cadmium, and mercury
S000037157 CDS YJL101C 10 236351 234315 C 2009-02-18 1996-07-31
S000003636 ORF Verified YJL100W LSB6 chromosome 10 10 237258 239081 W 2009-02-18 1996-07-31 Type II phosphatidylinositol 4-kinase that binds Las17p, which is a homolog of human Wiskott-Aldrich Syndrome protein involved in actin patch assembly and actin polymerization
S000037110 CDS YJL100W 10 237258 239081 W 2009-02-18 1996-07-31
S000003635 ORF Verified YJL099W CHS6 CSD3 chromosome 10 L000000334 10 239409 241649 W 2009-02-18 1996-07-31 Member of the ChAPs family of proteins (Chs5p-Arf1p-binding proteins: Bch1p, Bch2p, Bud7p, Chs6p), that forms the exomer complex with Chs5p to mediate export of specific cargo proteins, including Chs3p, from the Golgi to the plasma membrane
S000031796 CDS YJL099W 10 239409 241649 W 2009-02-18 1996-07-31
S000003634 ORF Verified YJL098W SAP185 chromosome 10 L000003246 10 242077 245253 W 2009-02-18 1996-07-31 Protein that forms a complex with the Sit4p protein phosphatase and is required for its function; member of a family of similar proteins including Sap4p, Sap155p, and Sap190p
S000031694 CDS YJL098W 10 242077 245253 W 2009-02-18 1996-07-31
S000003633 ORF Verified YJL097W PHS1 chromosome 10 10 245586 246239 W 2009-02-18 1996-07-31 Essential 3-hydroxyacyl-CoA dehydratase of the ER membrane, involved in elongation of very long-chain fatty acids; evolutionarily conserved, similar to mammalian PTPLA and PTPLB; involved in sphingolipid biosynthesis and protein trafficking
S000031576 CDS YJL097W 10 245586 246239 W 2009-02-18 1996-07-31
S000003632 ORF Verified YJL096W MRPL49 chromosome 10 10 246485 246970 W 2009-02-18 2003-09-22|1996-07-31 Mitochondrial ribosomal protein of the large subunit
S000030716 CDS YJL096W 10 246485 246970 W 2009-02-18 2003-09-22|1996-07-31
S000003631 ORF Verified YJL095W BCK1 SSP31|SLK1|SAP3|LAS3 chromosome 10 L000000162 10 247249 251685 W -64 2009-02-18 1996-07-31 Mitogen-activated protein (MAP) kinase kinase kinase acting in the protein kinase C signaling pathway, which controls cell integrity; upon activation by Pkc1p phosphorylates downstream kinases Mkk1p and Mkk2p
S000030629 CDS YJL095W 10 247249 251685 W 2009-02-18 1996-07-31
S000003630 ORF Verified YJL094C KHA1 chromosome 10 10 254436 251815 C 2009-02-18 1996-07-31 Putative K+/H+ antiporter with a probable role in intracellular cation homeostasis, localized to Golgi vesicles and detected in highly purified mitochondria in high-throughput studies
S000030439 CDS YJL094C 10 254436 251815 C 2009-02-18 1996-07-31
S000003629 ORF Verified YJL093C TOK1 YPK1|YORK|YKC1|DUK1 chromosome 10 L000003009 10 256806 254731 C 2009-02-18 1996-07-31 Outward-rectifier potassium channel of the plasma membrane with two pore domains in tandem, each of which forms a functional channel permeable to potassium; carboxy tail functions to prevent inner gate closures; target of K1 toxin
S000037648 CDS YJL093C 10 256806 254731 C 2009-02-18 1996-07-31
S000003628 ORF Verified YJL092W SRS2 HPR5|RADH1|RADH chromosome 10 L000000809|L000001578 10 257417 260941 W -61 2009-02-18 1996-07-31 DNA helicase and DNA-dependent ATPase involved in DNA repair, needed for proper timing of commitment to meiotic recombination and transition from Meiosis I to II; blocks trinucleotide repeat expansion; affects genome stability
S000037603 CDS YJL092W 10 257417 260941 W 2009-02-18 1996-07-31
S000003627 ORF Verified YJL091C GWT1 chromosome 10 10 262546 261074 C 2009-02-18 2003-09-22|1996-07-31 Protein involved in the inositol acylation of glucosaminyl phosphatidylinositol (GlcN-PI) to form glucosaminyl(acyl)phosphatidylinositol (GlcN(acyl)PI), an intermediate in the biosynthesis of glycosylphosphatidylinositol (GPI) anchors
S000037407 CDS YJL091C 10 262546 261074 C 2009-02-18 2003-09-22|1996-07-31
S000003626 ORF Verified YJL090C DPB11 chromosome 10 L000003001 10 265045 262751 C 2009-02-18 1996-07-31 Replication initiation protein that loads DNA pol epsilon onto pre-replication complexes at origins; checkpoint sensor recruited to stalled replication forks by the checkpoint clamp complex where it activates Mec1p; ortholog of human TopBP1
S000036680 CDS YJL090C 10 265045 262751 C 2009-02-18 1996-07-31
S000003625 ORF Verified YJL089W SIP4 chromosome 10 L000001893 10 265920 268409 W 2009-02-18 1996-07-31 C6 zinc cluster transcriptional activator that binds to the carbon source-responsive element (CSRE) of gluconeogenic genes; involved in the positive regulation of gluconeogenesis; regulated by Snf1p protein kinase; localized to the nucleus
S000036795 CDS YJL089W 10 265920 268409 W 2009-02-18 1996-07-31
S000003624 ORF Verified YJL088W ARG3 argF chromosome 10 L000000108 10 268793 269809 W -61 2009-02-18 1999-02-28|1996-07-31 Ornithine carbamoyltransferase (carbamoylphosphate:L-ornithine carbamoyltransferase), catalyzes the sixth step in the biosynthesis of the arginine precursor ornithine
S000036728 CDS YJL088W 10 268793 269809 W 2009-02-18 1999-02-28|1996-07-31
S000003623 ORF Verified YJL087C TRL1 RLG1|LIG1 chromosome 10 L000002336 10 272479 269996 C 2009-02-18 1996-07-31 tRNA ligase, required for tRNA splicing; composed of three essential domains containing the phosphodiesterase, polynucleotide kinase, and ligase activities required for ligation; localized at the inner membrane of the nuclear envelope
S000036631 CDS YJL087C 10 272479 269996 C 2009-02-18 1996-07-31
S000003621 ORF Verified YJL085W EXO70 chromosome 10 L000003349 10 272821 274692 W 2009-02-18 1996-07-31 Subunit of the exocyst complex (Sec3p, Sec5p, Sec6p, Sec8p, Sec10p, Sec15p, Exo70p, and Exo84p), which directs secretory vesicles to active sites of exocytosis; acts with Sec3p in membrane targeting of the exocyst via PI(4,5)P2 binding
S000035634 CDS YJL085W 10 272821 274692 W 2009-02-18 1996-07-31
S000003622 ORF Dubious YJL086C chromosome 10 10 272840 272472 C 2009-02-18 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified genes YJL085W/EXO70 and YJL087C/TRL1
S000035697 CDS YJL086C 10 272840 272472 C 2009-02-18 1996-07-31
S000003620 ORF Verified YJL084C ALY2 ART3 chromosome 10 10 277996 274856 C 2009-02-18 1997-07-27|1996-07-31 Protein proposed to regulate the endocytosis of plasma membrane proteins; interacts with the cyclin Pcl7p and ubiquitin ligase Rsp5p; phosphorylated by the cyclin-CDK complex, Pcl7p-Pho85p; mRNA is cell cycle regulated, peaking in M phase
S000035516 CDS YJL084C 10 277996 274856 C 2009-02-18 1997-07-27|1996-07-31
S000003619 ORF Verified YJL083W TAX4 chromosome 10 10 278835 280649 W 2009-02-18 1996-07-31 EH domain-containing protein involved in regulating phosphatidylinositol 4,5-bisphosphate levels and autophagy; Irs4p and Tax4p bind and activate the PtdIns phosphatase Inp51p; Irs4p and Tax4p are involved in localizing Atg17p to the PAS
S000034560 CDS YJL083W 10 278835 280649 W 2009-02-18 1996-07-31
S000003618 ORF Verified YJL082W IML2 chromosome 10 10 281179 283374 W 2009-02-18 1996-07-31 Protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
S000034438 CDS YJL082W 10 281179 283374 W 2009-02-18 1996-07-31
S000003617 ORF Verified YJL081C ARP4 ACT3 chromosome 10 L000000027 10 285265 283796 C 2009-02-18 1996-07-31 Nuclear actin-related protein involved in chromatin remodeling, component of chromatin-remodeling enzyme complexes
S000034308 CDS YJL081C 10 285265 283796 C 2009-02-18 1996-07-31
S000003616 ORF Verified YJL080C SCP160 chromosome 10 L000001817 10 289220 285552 C 2009-02-18 1996-07-31 Essential RNA-binding G protein effector of mating response pathway, mainly associated with nuclear envelope and ER, interacts in mRNA-dependent manner with translating ribosomes via multiple KH domains, similar to vertebrate vigilins
S000033394 CDS YJL080C 10 289220 285552 C 2009-02-18 1996-07-31
S000003615 ORF Verified YJL079C PRY1 chromosome 10 L000003216 10 290768 289869 C 2009-02-18 1996-07-31 Protein of unknown function
S000033334 CDS YJL079C 10 290768 289869 C 2009-02-18 1996-07-31
S000003614 ORF Verified YJL078C PRY3 chromosome 10 L000003218 10 293975 291330 C 2009-02-18 1996-07-31 Protein of unknown function
S000032582 CDS YJL078C 10 293975 291330 C 2009-02-18 1996-07-31
S000028662 ORF Uncharacterized YJL077W-B chromosome 10 10 294041 294139 W 2009-02-18 2003-07-29 Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching
S000032487 CDS YJL077W-B 10 294041 294139 W 2009-02-18 2003-07-29
S000028661 ORF Dubious YJL077W-A chromosome 10 10 294793 294879 W 2009-02-18 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL077C/ICS3
S000032486 CDS YJL077W-A 10 294793 294879 W 2009-02-18 2003-07-29
S000003613 ORF Verified YJL077C ICS3 chromosome 10 10 295055 294660 C 2009-02-18 1996-07-31 Protein of unknown function
S000032502 CDS YJL077C 10 295055 294660 C 2009-02-18 1996-07-31
S000003612 ORF Verified YJL076W NET1 SRM8|CFI1|ESC5 chromosome 10 L000004425 10 295239 298808 W 2009-02-18 1996-07-31 Core subunit of the RENT complex, which is a complex involved in nucleolar silencing and telophase exit; stimulates transcription by RNA polymerase I and regulates nucleolar structure
S000032450 CDS YJL076W 10 295239 298808 W 2009-02-18 1996-07-31
S000028447 ARS ARS1010 chromosome 10 10 298770 299250 2009-02-18 2002-12-16 Autonomously Replicating Sequence
S000003611 ORF Dubious YJL075C APQ13 chromosome 10 10 298870 298454 C 2009-02-18 1996-07-31 Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 85% of ORF overlaps the verified gene NET1; null mutant is sensitive to sorbate
S000031391 CDS YJL075C 10 298870 298454 C 2009-02-18 1996-07-31
S000003610 ORF Verified YJL074C SMC3 chromosome 10 L000003992 10 302843 299151 C 2009-02-18 1996-07-31 Subunit of the multiprotein cohesin complex required for sister chromatid cohesion in mitotic cells; also required, with Rec8p, for cohesion and recombination during meiosis; phylogenetically conserved SMC chromosomal ATPase family member
S000031287 CDS YJL074C 10 302843 299151 C 2009-02-18 1996-07-31
S000003609 ORF Verified YJL073W JEM1 KAR8 chromosome 10 L000003533 10 303175 305112 W 2009-02-18 1997-10-20|1996-07-31 DnaJ-like chaperone required for nuclear membrane fusion during mating, localizes to the ER membrane; exhibits genetic interactions with KAR2
S000031229 CDS YJL073W 10 303175 305112 W 2009-02-18 1997-10-20|1996-07-31
S000003608 ORF Verified YJL072C PSF2 CDC102 chromosome 10 10 305856 305215 C 2009-02-18 1996-07-31 Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), which is localized to DNA replication origins and implicated in assembly of the DNA replication machinery
S000030195 CDS YJL072C 10 305856 305215 C 2009-02-18 1996-07-31
S000003607 ORF Verified YJL071W ARG2 HRB574 chromosome 10 L000003263 10 306126 307850 W 2009-02-18 1996-07-31 Acetylglutamate synthase (glutamate N-acetyltransferase), mitochondrial enzyme that catalyzes the first step in the biosynthesis of the arginine precursor ornithine; forms a complex with Arg5,6p
S000030084 CDS YJL071W 10 306126 307850 W 2009-02-18 1996-07-31
S000003606 ORF Uncharacterized YJL070C chromosome 10 10 310631 307965 C 2009-02-18 1996-07-31 Putative protein of unknown function with similarity to AMP deaminases; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YJL070C is a non-essential gene
S000029919 CDS YJL070C 10 310631 307965 C 2009-02-18 1996-07-31
S000003605 ORF Verified YJL069C UTP18 chromosome 10 10 312700 310916 C 2009-02-18 1996-07-31 Possible U3 snoRNP protein involved in maturation of pre-18S rRNA, based on computational analysis of large-scale protein-protein interaction data
S000036438 CDS YJL069C 10 312700 310916 C 2009-02-18 1996-07-31
S000003604 ORF Verified YJL068C chromosome 10 10 313909 313010 C 2009-02-18 1996-07-31 Non-essential intracellular esterase that can function as an S-formylglutathione hydrolase; may be involved in the detoxification of formaldehyde, which can be metabolized to S-formylglutathione; similar to human esterase D
S000036339 CDS YJL068C 10 313909 313010 C 2009-02-18 1996-07-31
S000003603 ORF Dubious YJL067W chromosome 10 10 314078 314428 W 2009-02-18 1996-07-31 Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000036295 CDS YJL067W 10 314078 314428 W 2009-02-18 1996-07-31
S000003602 ORF Verified YJL066C MPM1 chromosome 10 10 314866 314108 C 2009-02-18 1996-07-31 Mitochondrial membrane protein of unknown function, contains no hydrophobic stretches
S000035314 CDS YJL066C 10 314866 314108 C 2009-02-18 1996-07-31
S000003600 ORF Dubious YJL064W chromosome 10 10 315169 315564 W 2009-02-18 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL065C/DLS1
S000035084 CDS YJL064W 10 315169 315564 W 2009-02-18 1996-07-31
S000003601 ORF Verified YJL065C DLS1 chromosome 10 10 315551 315048 C 2009-02-18 1996-07-31 Subunit of ISW2/yCHRAC chromatin accessibility complex along with Itc1p, Isw2p, and Dpb4p; involved in inheritance of telomeric silencing
S000035150 CDS YJL065C 10 315551 315048 C 2009-02-18 1996-07-31
S000003599 ORF Verified YJL063C MRPL8 HRD238 chromosome 10 L000001162|L000002524 10 316469 315753 C 2009-02-18 1996-07-31 Mitochondrial ribosomal protein of the large subunit
S000034082 CDS YJL063C 10 316469 315753 C 2009-02-18 1996-07-31
S000007611 ORF Verified YJL062W-A RRG10 chromosome 10 10 316717 316974 W 2009-02-18 2001-02-26 Putative protein of unknown function, proposed to be involved in the expression of mitochondrial proteins; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
S000037188 CDS YJL062W-A 10 316717 316974 W 2009-02-18 2001-02-26
S000003598 ORF Verified YJL062W LAS21 GPI7 chromosome 10 L000004283|L000004818 10 317278 319770 W 2009-02-18 1996-07-31 Integral plasma membrane protein involved in the synthesis of the glycosylphosphatidylinositol (GPI) core structure; mutations affect cell wall integrity
S000034026 CDS YJL062W 10 317278 319770 W 2009-02-18 1996-07-31
S000003597 ORF Verified YJL061W NUP82 HRB187 chromosome 10 L000002941 10 320010 322151 W 2009-02-18 1996-07-31 Nucleoporin, subunit of the nuclear pore complex (NPC); forms a subcomplex with Gle2p, Nup159p, Nsp1p, and Nup116p and is required for proper localization of Nup116p in the NPC
S000033873 CDS YJL061W 10 320010 322151 W 2009-02-18 1996-07-31
S000003596 ORF Verified YJL060W BNA3 chromosome 10 10 323380 324714 W 2009-02-18 1996-07-31 Kynurenine aminotransferase, catalyzes formation of kynurenic acid from kynurenine; potential Cdc28p substrate
S000033737 CDS YJL060W 10 323380 324714 W 2009-02-18 1996-07-31
S000003595 ORF Verified YJL059W YHC3 BTN1 chromosome 10 L000003332|L000003284 10 324958 326184 W 2009-02-18 1996-07-31 Vacuolar membrane protein involved in the ATP-dependent transport of arginine into the vacuole and possibly in balancing ion homeostasis; homolog of human CLN3 involved in Batten disease (juvenile onset neuronal ceroid lipofuscinosis)
S000034862 CDS YJL059W 10 324958 326184 W 2009-02-18 1996-07-31
S000003594 ORF Verified YJL058C BIT61 chromosome 10 10 327867 326236 C 2009-02-18 1996-07-31 Subunit of TORC2 (Tor2p-Lst8p-Avo1-Avo2-Tsc11p-Bit61p-Slm1p-Slm2p), a membrane-associated complex that regulates cell cycle-dependent actin cytoskeletal dynamics during polarized growth and cell wall integrity
S000032844 CDS YJL058C 10 327867 326236 C 2009-02-18 1996-07-31
S000003593 ORF Verified YJL057C IKS1 chromosome 10 L000004209 10 330115 328112 C 2009-02-18 1996-07-31 Putative serine/threonine kinase; expression is induced during mild heat stress; deletion mutants are hypersensitive to copper sulphate and resistant to sorbate; interacts with an N-terminal fragment of Sst2p
S000032730 CDS YJL057C 10 330115 328112 C 2009-02-18 1996-07-31
S000003592 ORF Verified YJL056C ZAP1 ZRG10 chromosome 10 L000003321 10 333067 330425 C 2009-02-18 1996-07-31 Zinc-regulated transcription factor; binds to zinc-responsive promoters to induce transcription of certain genes in presence of zinc, represses other genes in low zinc; regulates its own transcription; contains seven zinc-finger domains
S000032670 CDS YJL056C 10 333067 330425 C 2009-02-18 1996-07-31
S000003591 ORF Uncharacterized YJL055W chromosome 10 10 333351 334088 W 2009-02-18 1996-07-31 Putative protein of unknown function, proposed to be involved in the metabolism of purine and pyrimidine base analogues; deletion mutants are sensitive to HAP and AHA; overexpression confers resistance to 5-FOA and 5-FU
S000032627 CDS YJL055W 10 333351 334088 W 2009-02-18 1996-07-31
S000003590 ORF Verified YJL054W TIM54 chromosome 10 L000004342 10 334259 335695 W 2009-02-18 1996-07-31 Component of the mitochondrial TIM22 complex involved in insertion of polytopic proteins into the inner membrane
S000031626 CDS YJL054W 10 334259 335695 W 2009-02-18 1996-07-31
S000003589 ORF Verified YJL053W PEP8 VPT4|VPS26|GRD6 chromosome 10 L000001378 10 335892 337031 W 2009-02-18 1996-07-31 Vacuolar protein sorting protein that forms part of the multimeric membrane-associated retromer complex along with Vps35p, Vps29p, Vps17p, and Vps5p; essential for endosome-to-Golgi retrograde protein transport
S000031497 CDS YJL053W 10 335892 337031 W 2009-02-18 1996-07-31
S000028448 ARS ARS1011 ARSX-337 chromosome 10 10 337275 337523 2009-02-18 2002-12-16|2006-09-07 Autonomously Replicating Sequence
S000007610 ORF Uncharacterized YJL052C-A chromosome 10 10 337997 337878 C 2009-02-18 2001-02-26 Putative protein of unknown function, identified based on comparison to related yeast species
S000037187 CDS YJL052C-A 10 337997 337878 C 2009-02-18 2001-02-26
S000003588 ORF Verified YJL052W TDH1 GLD3 chromosome 10 L000002272 10 338265 339263 W 2009-02-18 1996-07-31 Glyceraldehyde-3-phosphate dehydrogenase, isozyme 1, involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell wall
S000031373 CDS YJL052W 10 338265 339263 W 2009-02-18 1996-07-31
S000003587 ORF Verified YJL051W IRC8 chromosome 10 10 339781 342249 W 2009-02-18 1996-07-31 Bud tip localized protein of unknown function; mRNA is targeted to the bud by a She2p dependent transport system; mRNA is cell cycle regulated via Fkh2p, peaking in G2/M phase; null mutant displays increased levels of spontaneous Rad52p foc
S000030449 CDS YJL051W 10 339781 342249 W 2009-02-18 1996-07-31
S000003586 ORF Verified YJL050W MTR4 DOB1 chromosome 10 L000004110 10 342516 345737 W 2009-02-18 1996-07-31 ATP-dependent 3'-5' RNA helicase, involved in nuclear RNA processing and degredation both as a component of the TRAMP complex and in TRAMP independent processes; member of the Dead-box family of helicases
S000030313 CDS YJL050W 10 342516 345737 W 2009-02-18 1996-07-31
S000003585 ORF Uncharacterized YJL049W chromosome 10 10 345967 347319 W 2009-02-18 1996-07-31 Putative protein of unknown function; YJL049W is a non-essential gene
S000036773 CDS YJL049W 10 345967 347319 W 2009-02-18 1996-07-31
S000003584 ORF Verified YJL048C UBX6 CUI2 chromosome 10 10 348631 347441 C 2009-02-18 1996-07-31 UBX (ubiquitin regulatory X) domain-containing protein that interacts with Cdc48p, transcription is repressed when cells are grown in media containing inositol and choline
S000036634 CDS YJL048C 10 348631 347441 C 2009-02-18 1996-07-31
S000028804 ORF Uncharacterized YJL047C-A chromosome 10 10 349172 349038 C 2009-02-18 2003-07-29 Putative protein of unknown function
S000033585 CDS YJL047C-A 10 349172 349038 C 2009-02-18 2003-07-29
S000006451 snoRNA snR60 SNR60 chromosome 10 L000004529 10 349227 349124 C 2009-02-18 2000-05-19 C/D box small nucleolar RNA (snoRNA), guides 2'-O-methylation of large subunit (LSU) rRNA at positions A817 and G908
S000030821 noncoding_exon snR60 10 349227 349124 C 2009-02-18 2000-05-19
S000003583 ORF Verified YJL047C RTT101 CULC|CUL8 chromosome 10 L000004737 10 352102 349574 C 2009-02-18 1996-07-31 Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex with a role in anaphase progression; implicated in Mms22-dependent DNA repair; involved with Mms1p in nonfunctional rRNA decay; modified by the ubiquitin-like protein, Rub1p
S000036565 CDS YJL047C 10 352102 349574 C 2009-02-18 1996-07-31
S000003582 ORF Verified YJL046W AIM22 RRG3|LIP3 chromosome 10 10 352380 353609 W 2009-02-18 1996-07-31|2005-12-01 Putative lipoate-protein ligase, required along with Lip2 and Lip5 for lipoylation of Lat1p and Kgd2p; similar to E. coli LplA; null mutant displays reduced frequency of mitochondrial genome loss
S000036505 CDS YJL046W 10 352380 353609 W 2009-02-18 1996-07-31|2005-12-01
S000006781 tRNA tY(GUA)J1 SUP7 chromosome 10 L000003607|L000002186 10 354238 354326 W -32 2009-02-18 2000-05-19 tRNA-Tyr
S000032080 intron tY(GUA)J1 10 354277 354290 W 2009-02-18 2000-05-19
S000032078 noncoding_exon tY(GUA)J1 10 354238 354276 W 2009-02-18 2000-05-19
S000032079 noncoding_exon tY(GUA)J1 10 354291 354326 W 2009-02-18 2000-05-19
S000007024 long_terminal_repeat YJLCdelta5 chromosome 10 10 355169 354838 C 2009-02-18 2000-05-19 Ty1 LTR
S000007023 long_terminal_repeat YJLCdelta4 chromosome 10 10 355198 354532 C 2009-02-18 2000-05-19 Ty1 LTR
S000006714 tRNA tR(UCU)J1 chromosome 10 L000003608 10 355368 355439 W 2009-02-18 2000-05-19 tRNA-Arg (Arg3), one of 11 nuclear tRNA genes containing the tDNA-anticodon UCU (converted to mcm5-UCU in the mature tRNA), one of 19 nuclear tRNAs for arginine; part of dicistronic transcript with tD(GUC)J2; target of K. lactis zymocin
S000030321 noncoding_exon tR(UCU)J1 10 355368 355439 W 2009-02-18 2000-05-19
S000006537 tRNA tD(GUC)J2 chromosome 10 L000003609 10 355450 355521 W 2009-02-18 2000-05-19 tRNA-Asp
S000030790 noncoding_exon tD(GUC)J2 10 355450 355521 W 2009-02-18 2000-05-19
S000003581 ORF Uncharacterized YJL045W SDH1b chromosome 10 10 356018 357922 W 2009-02-18 1996-07-31 Minor succinate dehydrogenase isozyme; homologous to Sdh1p, the major isozyme reponsible for the oxidation of succinate and transfer of electrons to ubiquinone; induced during the diauxic shift in a Cat8p-dependent manner
S000035600 CDS YJL045W 10 356018 357922 W 2009-02-18 1996-07-31
S000003580 ORF Verified YJL044C GYP6 chromosome 10 L000000748 10 359670 358294 C 2009-02-18 1996-07-31 GTPase-activating protein (GAP) for the yeast Rab family member, Ypt6p; involved in vesicle mediated protein transport
S000035463 CDS YJL044C 10 359670 358294 C 2009-02-18 1996-07-31
S000003579 ORF Uncharacterized YJL043W chromosome 10 10 360124 360897 W 2009-02-18 1996-07-31 Putative protein of unknown function; YJL043W is a non-essential gene
S000035409 CDS YJL043W 10 360124 360897 W 2009-02-18 1996-07-31
S000003578 ORF Verified YJL042W MHP1 chromosome 10 L000002720 10 361243 365439 W 2009-02-18 1996-07-31 Microtubule-associated protein involved in assembly and stabilization of microtubules; overproduction results in cell cycle arrest at G2 phase; similar to Drosophila protein MAP and to mammalian MAP4 proteins
S000034384 CDS YJL042W 10 361243 365439 W 2009-02-18 1996-07-31
S000003577 ORF Verified YJL041W NSP1 chromosome 10 L000001277 10 365778 368367 W 2009-02-18 1996-07-31 Essential component of the nuclear pore complex, which mediates nuclear import and export, found in both the Nup82 and Nic96 complexes
S000034258 CDS YJL041W 10 365778 365778 W 2009-02-18 1996-07-31
S000034259 CDS YJL041W 10 365897 368367 W 2009-02-18 1996-07-31
S000034260 intron YJL041W 10 365779 365896 W 2009-02-18 1996-07-31
S000003576 ORF Verified YJL039C NUP192 chromosome 10 S000007465 10 373793 368742 C 2009-02-18 1996-07-31 Essential structural subunit of the nuclear pore complex (NPC), localizes to the nuclear periphery of nuclear pores, homologous to human p205
S000034602 CDS YJL039C 10 373793 368742 C 2009-02-18 1996-07-31
S000006538 tRNA tD(GUC)J3 chromosome 10 L000003625 10 374489 374418 C 2009-02-18 2000-05-19 tRNA-Asp
S000030793 noncoding_exon tD(GUC)J3 10 374489 374418 C 2009-02-18 2000-05-19
S000006715 tRNA tR(UCU)J2 chromosome 10 L000003624 10 374571 374500 C 2009-02-18 2000-05-19 tRNA-Arg (Arg3); one of 11 nuclear tRNA genes containing the tDNA-anticodon UCU (converted to mcm5-UCU in the mature tRNA); one of 19 nuclear tRNAs for arginine; part of dicistronic transcript with tD(GUC)J3; target of K. lactis zymocin
S000030328 noncoding_exon tR(UCU)J2 10 374571 374500 C 2009-02-18 2000-05-19
S000028449 ARS ARS1012 ARSX-375 chromosome 10 10 374874 375116 2009-02-18 2002-12-16|2006-09-07 Autonomously Replicating Sequence
S000007025 long_terminal_repeat YJLCdelta6 chromosome 10 10 374929 374838 C 2009-02-18 2000-05-19 Ty1 LTR
S000028450 ARS ARS1013 chromosome 10 10 375700 376221 2009-02-18 2002-12-16 Autonomously Replicating Sequence; inefficient as chromosomal replication origin; replication capacity dependent upon Sum1p
S000003575 ORF Verified YJL038C LOH1 OSW4 chromosome 10 10 375768 375109 C 2009-02-18 1996-07-31 Protein of unknown function with proposed roles in maintenance of genome integrity and also in spore wall assembly; induced during sporulation; repressed during vegetative growth by Sum1p and Hst1p; sequence similar to IRC1
S000034497 CDS YJL038C 10 375768 375109 C 2009-02-18 1996-07-31
S000003574 ORF Verified YJL037W IRC18 chromosome 10 10 376656 377330 W 2009-02-18 1996-07-31 Putative protein of unknown function; expression induced in respiratory-deficient cells and in carbon-limited chemostat cultures; similar to adjacent ORF, YJL038C; null mutant displays increased levels of spontaneous Rad52p foci
S000034457 CDS YJL037W 10 376656 377330 W 2009-02-18 1996-07-31
S000007026 long_terminal_repeat YJLCdelta7 chromosome 10 10 377864 377592 C 2009-02-18 2000-05-19 Ty1 LTR
S000006759 tRNA tV(AAC)J chromosome 10 L000003610 10 378354 378427 W 2009-02-18 2000-05-19 tRNA-Val
S000032964 noncoding_exon tV(AAC)J 10 378354 378427 W 2009-02-18 2000-05-19
S000003573 ORF Verified YJL036W SNX4 ATG24|CVT13 chromosome 10 S000007467|L000004764 10 378819 380090 W 2009-02-18 1996-07-31 Sorting nexin, involved in retrieval of late-Golgi SNAREs from post-Golgi endosomes to the trans-Golgi network and in cytoplasm to vacuole transport; contains a PX phosphoinositide-binding domain; forms complexes with Snx41p and with Atg20p
S000032435 CDS YJL036W 10 378819 380090 W 2009-02-18 1996-07-31
S000003572 ORF Verified YJL035C TAD2 chromosome 10 S000007489 10 380995 380243 C 2009-02-18 1996-07-31 Subunit of tRNA-specific adenosine-34 deaminase, forms a heterodimer with Tad3p that converts adenosine to inosine at the wobble position of several tRNAs
S000032286 CDS YJL035C 10 380995 380243 C 2009-02-18 1996-07-31
S000003571 ORF Verified YJL034W KAR2 GRP78 chromosome 10 L000000887 10 381321 383369 W 2009-02-18 1996-07-31 ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding in the ER and may play a role in ER export of soluble proteins; regulates the unfolded protein response via interaction with Ire1p
S000032230 CDS YJL034W 10 381321 383369 W 2009-02-18 1996-07-31
S000003570 ORF Verified YJL033W HCA4 ECM24|DBP4 chromosome 10 L000003421 10 383831 386143 W 2009-02-18 1996-07-31 Putative nucleolar DEAD box RNA helicase; high-copy number suppression of a U14 snoRNA processing mutant suggests an involvement in 18S rRNA synthesis
S000031248 CDS YJL033W 10 383831 386143 W 2009-02-18 1996-07-31
S000003569 ORF Dubious YJL032W chromosome 10 10 386342 386656 W 2009-02-18 1996-07-31 Dubious open reading frame unlikely to encode a functional protein; overlaps 3' end of essential BET4 gene encoding the alpha subunit of Type II geranylgeranyltransferase
S000031093 CDS YJL032W 10 386342 386656 W 2009-02-18 1996-07-31
S000003568 ORF Verified YJL031C BET4 chromosome 10 L000000173 10 387432 386362 C 2009-02-18 2004-01-27|1996-07-31 Alpha subunit of Type II geranylgeranyltransferase required for vesicular transport between the endoplasmic reticulum and the Golgi; provides a membrane attachment moiety to Rab-like proteins Ypt1p and Sec4p
S000030060 CDS YJL031C 10 387342 386362 C 2009-02-18 2004-01-27
S000030059 CDS YJL031C 10 387432 387430 C 2009-02-18 2004-01-27|1996-07-31
S000030061 intron YJL031C 10 387429 387343 C 2009-02-18 2004-01-27
S000003567 ORF Verified YJL030W MAD2 chromosome 10 L000000975 10 387651 388241 W 2009-02-18 1996-07-31 Component of the spindle-assembly checkpoint complex, which delays the onset of anaphase in cells with defects in mitotic spindle assembly; forms a complex with Mad1p
S000030009 CDS YJL030W 10 387651 388241 W 2009-02-18 1996-07-31
S000003566 ORF Verified YJL029C VPS53 chromosome 10 10 390847 388379 C 2009-02-18 1996-07-31 Component of the GARP (Golgi-associated retrograde protein) complex, Vps51p-Vps52p-Vps53p-Vps54p, which is required for the recycling of proteins from endosomes to the late Golgi; required for vacuolar protein sorting
S000030293 CDS YJL029C 10 390847 388379 C 2009-02-18 1996-07-31
S000006661 tRNA tM(CAU)J1 EMT5 chromosome 10 L000000555|L000003623 10 391109 391037 C 2009-02-18 2000-05-19 tRNA-Met; tRNA that accepts methionine, functions in translational elongation but not translational initiation
S000029920 noncoding_exon tM(CAU)J1 10 391109 391037 C 2009-02-18 2000-05-19
S000003565 ORF Verified YJL028W chromosome 10 10 391305 391640 W 2009-02-18 1996-07-31 Protein of unknown function; may interact with ribosomes, based on co-purification experiments
S000030214 CDS YJL028W 10 391305 391640 W 2009-02-18 1996-07-31
S000003564 ORF Uncharacterized YJL027C chromosome 10 10 392243 391827 C 2009-02-18 1996-07-31 Putative protein of unknown function
S000036407 CDS YJL027C 10 392243 391827 C 2009-02-18 1996-07-31
S000003563 ORF Verified YJL026W RNR2 CRT6 chromosome 10 L000001656 10 392398 393597 W 0 2009-02-18 1996-07-31 Ribonucleotide-diphosphate reductase (RNR), small subunit; the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits
S000036365 CDS YJL026W 10 392398 393597 W 2009-02-18 1996-07-31
S000028660 ORF Dubious YJL026C-A chromosome 10 10 393281 393060 C 2009-02-18 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL026W/RNR2
S000032485 CDS YJL026C-A 10 393281 393060 C 2009-02-18 2003-07-29
S000003562 ORF Verified YJL025W RRN7 chromosome 10 L000001773 10 393961 395505 W 2009-02-18 1996-07-31 Component of the core factor (CF) rDNA transcription factor complex; CF is required for transcription of 35S rRNA genes by RNA polymerase I and is composed of Rrn6p, Rrn7p, and Rrn11p
S000036283 CDS YJL025W 10 393961 395505 W 2009-02-18 1996-07-31
S000003561 ORF Verified YJL024C APS3 YKS7 chromosome 10 L000003174 10 396586 395925 C 2009-02-18 1996-07-31 Small subunit of the clathrin-associated adaptor complex AP-3, which is involved in vacuolar protein sorting; related to the sigma subunit of the mammalian clathrin AP-3 complex; suppressor of loss of casein kinase 1 function
S000036076 CDS YJL024C 10 396487 395925 C 2009-02-18 1996-07-31
S000036075 CDS YJL024C 10 396586 396565 C 2009-02-18 1996-07-31
S000036077 intron YJL024C 10 396564 396488 C 2009-02-18 1996-07-31
S000006583 tRNA tG(GCC)J1 chromosome 10 L000003622 10 396790 396720 C 2009-02-18 2000-05-19 tRNA-Gly
S000030415 noncoding_exon tG(GCC)J1 10 396790 396720 C 2009-02-18 2000-05-19
S000003559 ORF Dubious YJL022W chromosome 10 10 398103 398411 W 2009-02-18 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene PET130
S000035121 CDS YJL022W 10 398103 398411 W 2009-02-18 1996-07-31
S000003560 ORF Verified YJL023C PET130 chromosome 10 L000003025 10 398392 397349 C 2009-02-18 1996-07-31 Protein required for respiratory growth; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
S000035183 CDS YJL023C 10 398392 397349 C 2009-02-18 1996-07-31
S000028659 ORF Dubious YJL020W-A chromosome 10 10 400975 401232 W 2009-02-18 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL020C/BBC1
S000032463 CDS YJL020W-A 10 400975 401232 W 2009-02-18 2003-07-29
S000003557 ORF Verified YJL020C BBC1 YJL021C|MTI1 chromosome 10 10 402404 398931 C 2009-02-18 2001-06-27|1996-07-31 Protein possibly involved in assembly of actin patches; interacts with an actin assembly factor Las17p and with the SH3 domains of Type I myosins Myo3p and Myo5p; localized predominantly to cortical actin patches
S000033969 CDS YJL020C 10 402404 398931 C 2009-02-18 2001-06-27|1996-07-31
S000003556 ORF Verified YJL019W MPS3 YJL018W|NEP98 chromosome 10 10 402891 404939 W 2009-02-18 2003-01-02|1996-07-31 Nuclear envelope protein required for SPB duplication and nuclear fusion; localizes to the SPB half bridge and at telomeres during meiosis; required with Ndj1p and Csm4p for meiotic bouquet formation and telomere-led rapid prophase movement
S000035368 CDS YJL019W 10 402891 404939 W 2009-02-18 2003-01-02|1996-07-31
S000003553 ORF Uncharacterized YJL016W YJL017W chromosome 10 10 405582 407267 W 2009-02-18 2003-09-29|1996-07-31 Putative protein of unknown function; GFP-fusion protein localizes to the cytoplasm; conserved in closely related Saccharomyces species
S000034286 CDS YJL016W 10 405582 407267 W 2009-02-18 2003-09-29|1996-07-31
S000003552 ORF Dubious YJL015C chromosome 10 10 407510 407136 C 2009-02-18 1996-07-31 Dubious open reading frame unlikely to encode a functional protein; expression if heat-inducible; located in promoter region of essential CCT3 gene encoding a subunit of the cytosolic chaperonin Cct ring complex, overlaps ORF YJL016W
S000034109 CDS YJL015C 10 407510 407136 C 2009-02-18 1996-07-31
S000003551 ORF Verified YJL014W CCT3 TCP3|BIN2 chromosome 10 L000002270 10 407551 409155 W 2009-02-18 1996-07-31 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of actin and tubulins in vivo
S000034079 CDS YJL014W 10 407551 409155 W 2009-02-18 1996-07-31
S000003550 ORF Verified YJL013C MAD3 chromosome 10 L000003179 10 411033 409486 C 2009-02-18 1996-07-31 Subunit of the spindle-assembly checkpoint complex, which delays anaphase onset in cells with defects in mitotic spindle assembly; pseudosubstrate inhibitor of APC(Cdc20), the anaphase promoting complex involved in securin (Pds1p) turnover
S000032025 CDS YJL013C 10 411033 409486 C 2009-02-18 1996-07-31
S000003549 ORF Verified YJL012C VTC4 YJL012C-A|PHM3 chromosome 10 S000007513 10 413392 411227 C 2009-02-18 2004-02-17|1996-07-31 Vacuolar membrane polyphosphate polymerase; subunit of the vacuolar transporter chaperone (VTC) complex involved in synthesis and transfer of polyP to the vacuole; regulates membrane trafficking; role in non-autophagic vacuolar fusion
S000031895 CDS YJL012C 10 413392 411227 C 2009-02-18 2004-02-17|1996-07-31
S000003548 ORF Verified YJL011C RPC17 chromosome 10 10 414763 414278 C 2009-02-18 1996-07-31 RNA polymerase III subunit C17; physically interacts with C31, C11, and TFIIIB70; may be involved in the recruitment of pol III by the preinitiation complex
S000030894 CDS YJL011C 10 414763 414278 C 2009-02-18 1996-07-31
S000006625 tRNA tK(CUU)J chromosome 10 L000003611 10 414959 415031 W 2009-02-18 2000-05-19 tRNA-Lys; a small portion is imported into mitochondria via interaction with mt lysyl-tRNA synthetase Msk1p and is necessary to decode AAG codons at high temperature, when base modification of mt-encoded tRNA-Lys is reduced
S000036030 noncoding_exon tK(CUU)J 10 414959 415031 W 2009-02-18 2000-05-19
S000006773 tRNA tW(CCA)J chromosome 10 L000003621 10 416029 415924 C 2009-02-18 2000-05-19 tRNA-Trp
S000033314 intron tW(CCA)J 10 415993 415960 C 2009-02-18 2000-05-19
S000033313 noncoding_exon tW(CCA)J 10 415959 415924 C 2009-02-18 2000-05-19
S000033312 noncoding_exon tW(CCA)J 10 416029 415994 C 2009-02-18 2000-05-19
S000007047 long_terminal_repeat YJLWtau3 YJRWtau3 chromosome 10 10 416259 416434 W 2009-02-18 2000-05-19 Ty4 LTR
S000007029 long_terminal_repeat YJLWdelta8 chromosome 10 10 416499 416643 W 2009-02-18 2000-05-19 Ty1 LTR
S000007030 long_terminal_repeat YJLWdelta9 chromosome 10 10 416892 417019 W 2009-02-18 2000-05-19 Ty1 LTR
S000028451 ARS ARS1014 ARSX-417 chromosome 10 10 417188 417433 2009-02-18 2002-12-16|2006-09-07 Autonomously Replicating Sequence
S000003547 ORF Verified YJL010C NOP9 chromosome 10 10 419555 417555 C 2009-02-18 1996-07-31 Essential subunit of U3-containing 90S preribosome involved in production of 18S rRNA and assembly of small ribosomal subunit; also part of pre-40S ribosome and required for its export into cytoplasm; binds RNA and contains pumilio domain
S000030801 CDS YJL010C 10 419555 417555 C 2009-02-18 1996-07-31
S000003546 ORF Dubious YJL009W chromosome 10 10 419848 420174 W 2009-02-18 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps CCT8/YJL008C, a verified gene encoding a subunit of the cytosolic chaperonin Cct ring complex
S000031233 CDS YJL009W 10 419848 420174 W 2009-02-18 1996-07-31
S000003545 ORF Verified YJL008C CCT8 chromosome 10 L000002764 10 421656 419950 C 2009-02-18 1996-07-31 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of actin and tubulins in vivo
S000031107 CDS YJL008C 10 421656 419950 C 2009-02-18 1996-07-31
S000007038 long_terminal_repeat YJLWtau4 chromosome 10 10 421939 422289 W 2009-02-18 2000-05-19 Ty4 LTR
S000007031 long_terminal_repeat YJLWdelta10 chromosome 10 10 422594 422880 W 2009-02-18 2000-05-19 Ty1 LTR
S000006662 tRNA tM(CAU)J2 EMT3 chromosome 10 L000000553|L000003612 10 422930 423002 W 2009-02-18 2000-05-19 tRNA-Met; tRNA that accepts methionine, functions in translational elongation but not translational initiation
S000029922 noncoding_exon tM(CAU)J2 10 422930 423002 W 2009-02-18 2000-05-19
S000003544 ORF Dubious YJL007C chromosome 10 10 423005 422691 C 2009-02-18 1996-07-31 Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000031008 CDS YJL007C 10 423005 422691 C 2009-02-18 1996-07-31
S000003543 ORF Verified YJL006C CTK2 chromosome 10 L000003011 10 424102 423131 C 2009-02-18 1996-07-31 Beta subunit of C-terminal domain kinase I (CTDK-I), which phosphorylates both RNA pol II subunit Rpo21p to affect transcription and pre-mRNA 3' end processing, and ribosomal protein Rps2p to increase translational fidelity
S000030929 CDS YJL006C 10 424102 423131 C 2009-02-18 1996-07-31
S000006650 tRNA tL(UAA)J SUP51 SUP52 chromosome 10 L000002209|L000003620 10 424508 424425 C 0 2009-02-18 2000-05-19 tRNA-Leu
S000037406 noncoding_exon tL(UAA)J 10 424508 424425 C 2009-02-18 2000-05-19
S000003542 ORF Verified YJL005W CYR1 FIL1|TSM0185|SRA4|HSR1|CDC35 chromosome 10 L000000467 10 425150 431230 W 2 2009-02-18 1996-07-31 Adenylate cyclase, required for cAMP production and cAMP-dependent protein kinase signaling; the cAMP pathway controls a variety of cellular processes, including metabolism, cell cycle, stress response, stationary phase, and sporulation
S000029993 CDS YJL005W 10 425150 431230 W 2009-02-18 1996-07-31
S000003541 ORF Verified YJL004C SYS1 chromosome 10 L000004153 10 432193 431582 C 2009-02-18 1996-07-31 Integral membrane protein of the Golgi required for targeting of the Arf-like GTPase Arl3p to the Golgi; multicopy suppressor of ypt6 null mutation
S000037910 CDS YJL004C 10 432193 431582 C 2009-02-18 1996-07-31
S000003540 ORF Verified YJL003W COX16 chromosome 10 10 432637 432993 W 2009-02-18 1996-07-31 Mitochondrial inner membrane protein, required for assembly of cytochrome c oxidase
S000037880 CDS YJL003W 10 432637 432993 W 2009-02-18 1996-07-31
S000003539 ORF Verified YJL002C OST1 NLT1 chromosome 10 L000002649 10 434644 433214 C 2009-02-18 1996-07-31 Alpha subunit of the oligosaccharyltransferase complex of the ER lumen, which catalyzes asparagine-linked glycosylation of newly synthesized proteins
S000035955 CDS YJL002C 10 434644 433214 C 2009-02-18 1996-07-31
S000003538 ORF Verified YJL001W PRE3 CRL21 chromosome 10 L000000418|L000001485 10 435156 435919 W 2009-02-18 1996-07-31 Beta 1 subunit of the 20S proteasome, responsible for cleavage after acidic residues in peptides
S000035909 CDS YJL001W 10 435156 435220 W 2009-02-18 1996-07-31
S000035910 CDS YJL001W 10 435337 435919 W 2009-02-18 1996-07-31
S000035911 intron YJL001W 10 435221 435336 W 2009-02-18 1996-07-31
S000006471 centromere CEN10 CEN10 chromosome 10 L000000303 10 436418 436300 C 0 2009-02-18 2000-05-19|2004-10-08 Chromosome X centromere
S000077296 CDEI CEN10 10 436418 436409 C 2009-02-18 2004-10-08
S000077297 CDEII CEN10 10 436408 436325 C 2009-02-18 2004-10-08
S000077298 CDEIII CEN10 10 436324 436300 C 2009-02-18 2004-10-08
S000003761 ORF Verified YJR001W AVT1 chromosome 10 10 436795 438603 W 2009-02-18 1996-07-31 Vacuolar transporter, imports large neutral amino acids into the vacuole; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters
S000033093 CDS YJR001W 10 436795 438603 W 2009-02-18 1996-07-31
S000003762 ORF Verified YJR002W MPP10 chromosome 10 L000004335 10 438857 440638 W 2009-02-18 1996-07-31 Component of the SSU processome and 90S preribosome, required for pre-18S rRNA processing, interacts with and controls the stability of Imp3p and Imp4p, essential for viability; similar to human Mpp10p
S000033184 CDS YJR002W 10 438857 440638 W 2009-02-18 1996-07-31
S000003763 ORF Uncharacterized YJR003C chromosome 10 10 442545 440986 C 2009-02-18 1996-07-31|2006-05-09 Putative protein of unknown function; detected in highly purified mitochondria in high-throughput studies; predicted to be involved in ribosome biogenesis
S000033209 CDS YJR003C 10 442545 440986 C 2009-02-18 1996-07-31|2006-05-09
S000028452 ARS ARS1015 chromosome 10 10 442548 442957 2009-02-18 2002-12-16 Autonomously Replicating Sequence
S000003764 ORF Verified YJR004C SAG1 AG(ALPHA)1 chromosome 10 L000001796 10 444853 442901 C 2 2009-02-18 1996-07-31 Alpha-agglutinin of alpha-cells, binds to Aga1p during agglutination, N-terminal half is homologous to the immunoglobulin superfamily and contains binding site for a-agglutinin, C-terminal half is highly glycosylated and contains GPI anchor
S000034030 CDS YJR004C 10 444853 442901 C 2009-02-18 1996-07-31
S000003765 ORF Verified YJR005W APL1 YAP80 chromosome 10 L000002495 10 445915 448017 W 2009-02-18 1996-07-31 Beta-adaptin, large subunit of the clathrin associated protein complex (AP-2); involved in vesicle mediated transport; similar to mammalian beta-chain of the clathrin associated protein complex
S000034176 CDS YJR005W 10 445915 448017 W 2009-02-18 1996-07-31
S000028523 ORF Uncharacterized YJR005C-A chromosome 10 10 448750 448469 C 2009-02-18 2003-07-29 Putative protein of unknown function, originally identified as a syntenic homolog of an Ashbya gossypii gene
S000030322 CDS YJR005C-A 10 448750 448469 C 2009-02-18 2003-07-29
S000003766 ORF Verified YJR006W POL31 HYS2|SDP5|HUS2 chromosome 10 L000002981 10 449194 450657 W 2009-02-18 1996-07-31 DNA polymerase III (delta) subunit, essential for cell viability; involved in DNA replication and DNA repair
S000035159 CDS YJR006W 10 449194 450657 W 2009-02-18 1996-07-31
S000003767 ORF Verified YJR007W SUI2 chromosome 10 L000002178 10 451012 451926 W 2 2009-02-18 1996-07-31 Alpha subunit of the translation initiation factor eIF2, involved in the identification of the start codon; phosphorylation of Ser51 is required for regulation of translation by inhibiting the exchange of GDP for GTP
S000035254 CDS YJR007W 10 451012 451926 W 2009-02-18 1996-07-31
S000003768 ORF Uncharacterized YJR008W chromosome 10 10 452422 453438 W 2009-02-18 1996-07-31 Putative protein of unknown function; expression repressed by inosine and choline in an Opi1p-dependent manner; expression induced by mild heat-stress on a non-fermentable carbon source.
S000035336 CDS YJR008W 10 452422 453438 W 2009-02-18 1996-07-31
S000028453 ARS ARS1016 chromosome 10 10 454576 455547 2009-02-18 2002-12-16 Autonomously Replicating Sequence
S000003769 ORF Verified YJR009C TDH2 GLD2 chromosome 10 L000002273 10 454673 453675 C 2.95 2009-02-18 1996-07-31 Glyceraldehyde-3-phosphate dehydrogenase, isozyme 2, involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell wall
S000035380 CDS YJR009C 10 454673 453675 C 2009-02-18 1996-07-31
S000003771 ORF Verified YJR010W MET3 chromosome 10 L000001078 10 456231 457766 W 3 2009-02-18 1996-07-31 ATP sulfurylase, catalyzes the primary step of intracellular sulfate activation, essential for assimilatory reduction of sulfate to sulfide, involved in methionine metabolism
S000031767 CDS YJR010W 10 456231 457766 W 2009-02-18 1996-07-31
S000003770 ORF Verified YJR010C-A SPC1 chromosome 10 L000003006 10 458353 458069 C 2009-02-18 1996-07-31 Subunit of the signal peptidase complex (SPC), which cleaves the signal sequence from proteins targeted to the endoplasmic reticulum (ER), homolog of the SPC12 subunit of mammalian signal peptidase complex
S000037612 CDS YJR010C-A 10 458353 458069 C 2009-02-18 1996-07-31
S000028454 ARS ARS1017 chromosome 10 10 459329 459887 2009-02-18 2002-12-16 Autonomously Replicating Sequence
S000003772 ORF Uncharacterized YJR011C chromosome 10 10 459418 458633 C 2009-02-18 1996-07-31 Putative protein of unknown function; GFP-fusion protein expression is induced in response to the DNA-damaging agent MMS
S000031827 CDS YJR011C 10 459418 458633 C 2009-02-18 1996-07-31
S000003774 ORF Verified YJR013W GPI14 PMH1 chromosome 10 10 460374 461585 W 2009-02-18 2004-02-12|1996-07-31 Glycosylphosphatidylinositol-alpha 1,4 mannosyltransferase I, involved in GPI anchor biosynthesis, requires Pbn1p for function; homolog of mammalian PIG-M
S000037491 CDS YJR013W 10 460374 461585 W 2009-02-18 2004-02-12|1996-07-31
S000003773 ORF Uncharacterized YJR012C chromosome 10 10 460410 459787 C 2009-02-18 1996-07-31 Essential protein of unknown function; proposed involvement in transport based on mass spectrometry analysis of copurifying proteins; partially overlaps neighboring ORF, GPI14/YJR013W
S000031960 CDS YJR012C 10 460410 459787 C 2009-02-18 1996-07-31
S000003775 ORF Verified YJR014W TMA22 RBF22 chromosome 10 10 461821 462417 W 2009-02-18 1996-07-31 Protein of unknown function; associates with ribosomes and has a putative RNA binding domain; interacts with Tma20p; similar to human GRAP and human DRP1, which interacts with human Tma20p homolog MCT-1
S000037578 CDS YJR014W 10 461821 462417 W 2009-02-18 1996-07-31
S000003776 ORF Uncharacterized YJR015W chromosome 10 10 462713 464245 W 2009-02-18 1996-07-31 Putative protein of unknown function; localizes to the endoplasmic reticulum and cytoplasm; predicted to encode a membrane transporter based on phylogenetic analysis; YJR015W is a non-essential gene
S000037660 CDS YJR015W 10 462713 464245 W 2009-02-18 1996-07-31
S000003777 ORF Verified YJR016C ILV3 chromosome 10 L000000859 10 466200 464443 C 10 2009-02-18 1996-07-31 Dihydroxyacid dehydratase, catalyzes third step in the common pathway leading to biosynthesis of branched-chain amino acids
S000037686 CDS YJR016C 10 466200 464443 C 2009-02-18 1996-07-31
S000003779 ORF Dubious YJR018W chromosome 10 10 466778 467140 W 2009-02-18 1996-07-31 Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000030641 CDS YJR018W 10 466778 467140 W 2009-02-18 1996-07-31
S000003778 ORF Verified YJR017C ESS1 PIN1|PTF1 chromosome 10 L000000587 10 467025 466513 C 17 2009-02-18 2003-09-22|1996-07-31 Peptidylprolyl-cis/trans-isomerase (PPIase) specific for phosphorylated serine and threonine residues N-terminal to proline; regulates phosphorylation of the RNA polymerase II large subunit (Rpo21p) C-terminal domain
S000030503 CDS YJR017C 10 467025 466513 C 2009-02-18 2003-09-22|1996-07-31
S000003781 ORF Dubious YJR020W chromosome 10 10 467993 468325 W 2009-02-18 1996-07-31 Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000030190 CDS YJR020W 10 467993 468325 W 2009-02-18 1996-07-31
S000003780 ORF Verified YJR019C TES1 PTE1 chromosome 10 L000003343 10 468273 467224 C 2009-02-18 1996-07-31 Peroxisomal acyl-CoA thioesterase likely to be involved in fatty acid oxidation rather than fatty acid synthesis; conserved protein also found in human peroxisomes; TES1 mRNA levels increase during growth on fatty acids
S000030681 CDS YJR019C 10 468273 467224 C 2009-02-18 1996-07-31
S000003782 ORF Verified YJR021C REC107 MER2 chromosome 10 L000001606 10 469571 468547 C 2009-02-18 1996-07-31 Protein involved in early stages of meiotic recombination; involved in coordination between the initiation of recombination and the first division of meiosis; part of a complex (Rec107p-Mei4p-Rec114p) required for ds break formation
S000030251 CDS YJR021C 10 469175 468547 C 2009-02-18 1996-07-31
S000030250 CDS YJR021C 10 469571 469256 C 2009-02-18 1996-07-31
S000030252 intron YJR021C 10 469255 469176 C 2009-02-18 1996-07-31
S000003783 ORF Verified YJR022W LSM8 chromosome 10 L000004687 10 469776 470105 W 2009-02-18 2003-09-22|1996-07-31 Lsm (Like Sm) protein; forms heteroheptameric complex (with Lsm2p, Lsm3p, Lsm4p, Lsm5p, Lsm6p, and Lsm7p) that is part of spliceosomal U6 snRNP and is also implicated in processing of pre-tRNA, pre-snoRNA, and pre-rRNA
S000033657 CDS YJR022W 10 469776 470105 W 2009-02-18 2003-09-22|1996-07-31
S000003784 ORF Dubious YJR023C chromosome 10 10 470197 469796 C 2009-02-18 1996-07-31 Putative protein of unknown function; open reading frame overlaps LSM8/YJR022W encoding an essential snRNP protein required for RNA processing and splicing
S000033704 CDS YJR023C 10 470197 469796 C 2009-02-18 1996-07-31
S000003785 ORF Uncharacterized YJR024C MDE1 chromosome 10 10 470956 470222 C 2009-02-18 1996-07-31 5'-methylthioribulose-1-phosphate dehydratase; acts in the methionine salvage pathway; potential Smt3p sumoylation substrate; expression downregulated by caspofungin and deletion mutant is caspofungin resistant
S000033856 CDS YJR024C 10 470956 470222 C 2009-02-18 1996-07-31
S000003786 ORF Verified YJR025C BNA1 HAD1 chromosome 10 L000003490 10 471663 471130 C 2009-02-18 1996-07-31 3-hydroxyanthranilic acid dioxygenase, required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expression regulated by Hst1p
S000033981 CDS YJR025C 10 471663 471130 C 2009-02-18 1996-07-31
S000007040 long_terminal_repeat YJRWdelta11 chromosome 10 10 472455 472792 W 2009-02-18 2000-05-19 Ty1 LTR
S000007048 retrotransposon YJRWTy1-1 chromosome 10 10 472455 478376 W 2009-02-18 2000-05-19 Long Terminal Repeat (LTR) retrotransposon of the Copia (Pseudoviridae) group; contains co-transcribed genes TYA Gag and TYB Pol, encoding proteins involved in structure and function of virus-like particles, flanked by two direct repeats
S000003787 transposable_element_gene YJR026W chromosome 10 10 472752 474074 W 2009-02-18 1996-07-31 Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag
S000034898 CDS YJR026W 10 472752 474074 W 2009-02-18 1996-07-31
S000003788 transposable_element_gene YJR027W chromosome 10 10 472752 478020 W 2009-02-18 1996-07-31 Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes
S000035049 CDS YJR027W 10 472752 474053 W 2009-02-18 1996-07-31
S000035050 CDS YJR027W 10 474055 478020 W 2009-02-18 1996-07-31
S000035051 plus_1_translational_frameshift YJR027W 10 474054 474054 W 2009-02-18 1996-07-31
S000007049 retrotransposon YJRWTy1-2 chromosome 10 10 478043 483964 W 2009-02-18 2000-05-19 Long Terminal Repeat (LTR) retrotransposon of the Copia (Pseudoviridae) group; contains co-transcribed genes TYA Gag and TYB Pol, encoding proteins involved in structure and function of virus-like particles, flanked by two direct repeats
S000007041 long_terminal_repeat YJRWdelta12 chromosome 10 10 478043 478376 W 2009-02-18 2000-05-19 Ty1 LTR
S000003790 transposable_element_gene YJR029W chromosome 10 10 478336 483604 W 2009-02-18 1996-07-31 Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes
S000036043 CDS YJR029W 10 478336 479636 W 2009-02-18 1996-07-31
S000036044 CDS YJR029W 10 479638 483604 W 2009-02-18 1996-07-31
S000036045 plus_1_translational_frameshift YJR029W 10 479637 479637 W 2009-02-18 1996-07-31
S000003789 transposable_element_gene YJR028W chromosome 10 10 478336 479658 W 2009-02-18 1996-07-31 Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag
S000035151 CDS YJR028W 10 478336 479658 W 2009-02-18 1996-07-31
S000007042 long_terminal_repeat YJRWdelta13 chromosome 10 10 483627 483964 W 2009-02-18 2000-05-19 Ty1 LTR
S000003791 ORF Uncharacterized YJR030C chromosome 10 10 486188 483951 C 2009-02-18 1996-07-31 Putative protein of unknown function; expression repressed in carbon limited vs carbon replete chemostat cultures; YJR030C is a non-essential gene
S000034642 CDS YJR030C 10 486188 483951 C 2009-02-18 1996-07-31
S000003792 ORF Verified YJR031C GEA1 chromosome 10 L000004312 10 490804 486578 C 2009-02-18 1996-07-31 Guanine nucleotide exchange factor for ADP ribosylation factors (ARFs), involved in vesicular transport between the Golgi and ER, Golgi organization, and actin cytoskeleton organization; similar to but not functionally redundant with Gea2p
S000034771 CDS YJR031C 10 490804 486578 C 2009-02-18 1996-07-31
S000003793 ORF Verified YJR032W CPR7 chromosome 10 L000003230 10 491073 492254 W 2009-02-18 1996-07-31 Peptidyl-prolyl cis-trans isomerase (cyclophilin), catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; binds to Hsp82p and contributes to chaperone activity
S000035830 CDS YJR032W 10 491073 492254 W 2009-02-18 1996-07-31
S000003794 ORF Verified YJR033C RAV1 SOI3 chromosome 10 S000029472|L000002969 10 496443 492370 C 2009-02-18 1996-07-31 Subunit of the RAVE complex (Rav1p, Rav2p, Skp1p), which promotes assembly of the V-ATPase holoenzyme; required for transport between the early and late endosome/PVC and for localization of TGN membrane proteins; potential Cdc28p substrate
S000035875 CDS YJR033C 10 496443 492370 C 2009-02-18 1996-07-31
S000003795 ORF Verified YJR034W PET191 chromosome 10 L000001400 10 496675 497001 W 2009-02-18 1996-07-31 Protein required for assembly of cytochrome c oxidase; exists as an oligomer that is integral to the mitochondrial inner membrane and faces the intermembrane space; contains a twin Cx9C motif
S000037813 CDS YJR034W 10 496675 497001 W 2009-02-18 1996-07-31
S000003796 ORF Verified YJR035W RAD26 chromosome 10 L000001569 10 497347 500604 W 2009-02-18 1996-07-31 Protein involved in transcription-coupled nucleotide excision repair of UV-induced DNA lesions; recruitment to DNA lesions is dependent on an elongating RNA polymerase II; homolog of human CSB protein
S000037907 CDS YJR035W 10 497347 500604 W 2009-02-18 1996-07-31
S000003798 ORF Dubious YJR037W chromosome 10 10 503094 503477 W 2009-02-18 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified gene HUL4/YJR036C; deletion mutant has decreased spore survival in Drosophila feces
S000030927 CDS YJR037W 10 503094 503477 W 2009-02-18 1996-07-31
S000003797 ORF Verified YJR036C HUL4 chromosome 10 10 503383 500705 C 2009-02-18 1996-07-31 Protein with similarity to hect domain E3 ubiquitin-protein ligases, not essential for viability
S000029850 CDS YJR036C 10 503383 500705 C 2009-02-18 1996-07-31
S000003800 ORF Uncharacterized YJR039W chromosome 10 10 503928 507293 W 2009-02-18 1996-07-31 Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
S000031105 CDS YJR039W 10 503928 507293 W 2009-02-18 1996-07-31
S000003799 ORF Dubious YJR038C chromosome 10 10 504064 503702 C 2009-02-18 1996-07-31 Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000030967 CDS YJR038C 10 504064 503702 C 2009-02-18 1996-07-31
S000003801 ORF Verified YJR040W GEF1 CLC chromosome 10 L000000701 10 507738 510077 W 2009-02-18 1996-07-31 Voltage-gated chloride channel localized to the golgi, the endosomal system, and plasma membrane, and involved in cation homeostasis; highly homologous to vertebrate voltage-gated chloride channels
S000030664 CDS YJR040W 10 507738 510077 W 2009-02-18 1996-07-31
S000003802 ORF Verified YJR041C URB2 NPA2 chromosome 10 10 513755 510231 C 2009-02-18 1996-07-31 Nucleolar protein required for normal metabolism of the rRNA primary transcript, proposed to be involved in ribosome biogenesis
S000030713 CDS YJR041C 10 513755 510231 C 2009-02-18 1996-07-31
S000003803 ORF Verified YJR042W NUP85 RAT9 chromosome 10 L000003023 10 514047 516281 W 2009-02-18 1996-07-31 Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), required for assembly of the subcomplex and also for formation of the nucleocytoplasmic Gsp1p concentration gradient that plays a role in nuclear trafficking
S000030892 CDS YJR042W 10 514047 516281 W 2009-02-18 1996-07-31
S000003804 ORF Verified YJR043C POL32 chromosome 10 L000004337 10 517505 516453 C 2009-02-18 1996-07-31 Third subunit of DNA polymerase delta, involved in chromosomal DNA replication; required for error-prone DNA synthesis in the presence of DNA damage and processivity; interacts with Hys2p, PCNA (Pol30p), and Pol1p
S000031802 CDS YJR043C 10 517505 516453 C 2009-02-18 1996-07-31
S000006663 tRNA tM(CAU)J3 IMT3 chromosome 10 L000003619 10 517876 517805 C 2009-02-18 2000-05-19 tRNA-IMet; one of four initiator methionine tRNAs in yeast that are functional for translation
S000029924 noncoding_exon tM(CAU)J3 10 517876 517805 C 2009-02-18 2000-05-19
S000007043 long_terminal_repeat YJRWdelta14 chromosome 10 10 517951 518091 W 2009-02-18 2000-05-19 Ty1 LTR
S000003805 ORF Verified YJR044C VPS55 chromosome 10 10 519177 518755 C 2009-02-18 1996-07-31 Late endosomal protein involved in late endosome to vacuole trafficking; functional homolog of human obesity receptor gene-related protein (OB-RGRP)
S000031950 CDS YJR044C 10 519177 518755 C 2009-02-18 1996-07-31
S000003806 ORF Verified YJR045C SSC1 mtHSP70|ENS1 chromosome 10 L000000561 10 521594 519630 C 2009-02-18 1996-07-31 Hsp70 family ATPase, constituent of the import motor component of the Translocase of the Inner Mitochondrial membrane (TIM23 complex); involved in protein translocation and folding; subunit of SceI endonuclease
S000032104 CDS YJR045C 10 521594 519630 C 2009-02-18 1996-07-31
S000003807 ORF Verified YJR046W TAH11 CDT1|SID2 chromosome 10 L000004733 10 522040 523854 W 2009-02-18 1996-07-31 DNA replication licensing factor, required for pre-replication complex assembly
S000034108 CDS YJR046W 10 522040 523854 W 2009-02-18 1996-07-31
S000006727 tRNA tS(AGA)J chromosome 10 L000003618 10 524085 524004 C 2009-02-18 2000-05-19 tRNA-Ser
S000032380 noncoding_exon tS(AGA)J 10 524085 524004 C 2009-02-18 2000-05-19
S000003808 ORF Verified YJR047C ANB1 eIF-5A|TIF51B|HYP1 chromosome 10 L000000085|L000000846|L000002308 10 525373 524900 C 2009-02-18 1996-07-31 Translation elongation factor eIF-5A, previously thought to function in translation initiation; similar to and functionally redundant with Hyp2p; undergoes an essential hypusination modification; expressed under anaerobic conditions
S000034179 CDS YJR047C 10 525373 524900 C 2009-02-18 1996-07-31
S000003809 ORF Verified YJR048W CYC1 chromosome 10 L000000448 10 526327 526656 W 34 2009-02-18 1996-07-31 Cytochrome c, isoform 1; electron carrier of the mitochondrial intermembrane space that transfers electrons from ubiquinone-cytochrome c oxidoreductase to cytochrome c oxidase during cellular respiration
S000034309 CDS YJR048W 10 526327 526656 W 2009-02-18 1996-07-31
S000003810 ORF Verified YJR049C UTR1 chromosome 10 L000002680 10 528468 526876 C 2009-02-18 1996-07-31 ATP-NADH kinase; phosphorylates both NAD and NADH; active as a hexamer; enhances the activity of ferric reductase (Fre1p)
S000034337 CDS YJR049C 10 528468 526876 C 2009-02-18 1996-07-31
S000003811 ORF Verified YJR050W ISY1 NTC30|UTR3 chromosome 10 L000002730 10 528689 529396 W 2009-02-18 1996-07-31 Member of NineTeen Complex (NTC) that contains Prp19p and stabilizes U6 snRNA in catalytic forms of spliceosome containing U2, U5, and U6 snRNAs, interacts with Prp16p to modulate splicing fidelity; isy1 syf2 cells have defective spindles
S000033850 CDS YJR050W 10 528689 529396 W 2009-02-18 1996-07-31
S000003812 ORF Verified YJR051W OSM1 FRDS2 chromosome 10 L000001317 10 529853 531358 W 34 2009-02-18 1996-07-31 Fumarate reductase, catalyzes the reduction of fumarate to succinate, required for the reoxidation of intracellular NADH under anaerobic conditions; mutations cause osmotic sensitivity
S000033966 CDS YJR051W 10 529853 531358 W 2009-02-18 1996-07-31
S000007032 long_terminal_repeat YJRCdelta15 YJLWdelta15 chromosome 10 10 531667 531508 C 2009-02-18 2000-05-19|2007-04-04 Ty1 LTR
S000006584 tRNA tG(GCC)J2 chromosome 10 L000003613 10 531820 531890 W 2009-02-18 2000-05-19 tRNA-Gly
S000030417 noncoding_exon tG(GCC)J2 10 531820 531890 W 2009-02-18 2000-05-19
S000003813 ORF Verified YJR052W RAD7 chromosome 10 L000001561 10 532054 533751 W 35 2009-02-18 1996-07-31 Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad16p) during nucleotide excision repair; subunit of Nucleotide Excision Repair Factor 4 (NEF4) and the Elongin-Cullin-Socs (ECS) ligase complex
S000034844 CDS YJR052W 10 532054 533751 W 2009-02-18 1996-07-31
S000003814 ORF Verified YJR053W BFA1 IBD1 chromosome 10 10 534019 535743 W 2009-02-18 1996-07-31 Component of the GTPase-activating Bfa1p-Bub2p complex involved in multiple cell cycle checkpoint pathways that control exit from mitosis
S000034983 CDS YJR053W 10 534019 535743 W 2009-02-18 1996-07-31
S000003815 ORF Uncharacterized YJR054W chromosome 10 10 536048 537541 W 2009-02-18 1996-07-31 Vacuolar protein of unknown function; potential Cdc28p substrate
S000035180 CDS YJR054W 10 536048 537541 W 2009-02-18 1996-07-31
S000007033 long_terminal_repeat YJRCdelta16 YJLWdelta16 chromosome 10 10 538033 537733 C 2009-02-18 2000-05-19|2007-04-04 Ty1 LTR
S000007044 long_terminal_repeat YJRWdelta17 chromosome 10 10 538095 538426 W 2009-02-18 2000-05-19 Ty1 LTR
S000006707 tRNA tR(CCU)J HSX1 chromosome 10 10 538547 538618 W 2009-02-18 2000-05-19 tRNA-Arg of low abundance; required for growth on nonfermentable carbon sources at high temperatures, for synthesis of heat shock protein Ssc1p, and for Ty1 retrotransposition through the regulation of translational frameshifting
S000032860 noncoding_exon tR(CCU)J 10 538547 538618 W 2009-02-18 2000-05-19
S000003816 ORF Verified YJR055W HIT1 chromosome 10 L000000786 10 538764 539258 W 2009-02-18 1996-07-31 Protein of unknown function, required for growth at high temperature
S000036066 CDS YJR055W 10 538764 539258 W 2009-02-18 1996-07-31
S000028455 ARS ARS1018 ARSX-540 chromosome 10 10 540538 540772 2009-02-18 2002-12-16|2006-09-07 Autonomously Replicating Sequence
S000007045 long_terminal_repeat YJRWdelta18 chromosome 10 10 540758 541079 W 2009-02-18 2000-05-19 Ty1 LTR
S000007034 long_terminal_repeat YJRCdelta19 YJLWdelta19 chromosome 10 10 541419 541087 C 2009-02-18 2000-05-19|2007-04-04 Ty1 LTR
S000006539 tRNA tD(GUC)J4 chromosome 10 L000003615 10 541500 541571 W 2009-02-18 2000-05-19 tRNA-Asp
S000030795 noncoding_exon tD(GUC)J4 10 541500 541571 W 2009-02-18 2000-05-19
S000003817 ORF Uncharacterized YJR056C chromosome 10 10 542494 541784 C 2009-02-18 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus
S000036154 CDS YJR056C 10 542494 541784 C 2009-02-18 1996-07-31
S000006782 tRNA tY(GUA)J2 SUP4 chromosome 10 L000003617|L000002183 10 543036 542948 C 36 2009-02-18 2000-05-19 tRNA-Tyr
S000032087 intron tY(GUA)J2 10 542997 542984 C 2009-02-18 2000-05-19
S000032086 noncoding_exon tY(GUA)J2 10 542983 542948 C 2009-02-18 2000-05-19
S000032085 noncoding_exon tY(GUA)J2 10 543036 542998 C 2009-02-18 2000-05-19
S000007046 long_terminal_repeat YJRWdelta20 chromosome 10 10 543440 543762 W 2009-02-18 2000-05-19 Ty1 LTR
S000003818 ORF Verified YJR057W CDC8 chromosome 10 L000000248 10 544054 544704 W 36 2009-02-18 1996-07-31 Thymidylate and uridylate kinase, functions in de novo biosynthesis of pyrimidine deoxyribonucleotides; converts dTMP to dTDP and dUMP to dUTP; essential for mitotic and meiotic DNA replication; homologous to S. pombe Tmp1p
S000036320 CDS YJR057W 10 544054 544704 W 2009-02-18 1996-07-31
S000003819 ORF Verified YJR058C APS2 YAP17 chromosome 10 L000002492 10 545167 544724 C 2009-02-18 1996-07-31 Small subunit of the clathrin-associated adaptor complex AP-2, which is involved in protein sorting at the plasma membrane; related to the sigma subunit of the mammalian plasma membrane clathrin-associated protein (AP-2) complex
S000036359 CDS YJR058C 10 545167 544724 C 2009-02-18 1996-07-31
S000003820 ORF Verified YJR059W PTK2 STK2 chromosome 10 L000003492 10 545779 548235 W 2009-02-18 1996-07-31 Putative serine/threonine protein kinase involved in regulation of ion transport across plasma membrane; enhances spermine uptake
S000030117 CDS YJR059W 10 545779 548235 W 2009-02-18 1996-07-31
S000003821 ORF Verified YJR060W CBF1 CPF1|CEP1 chromosome 10 L000000311|L000000401 10 548751 549806 W 40 2009-02-18 1996-07-31 Helix-loop-helix protein that binds the motif CACRTG, which is present at several sites including MET gene promoters and centromere DNA element I (CDEI); required for nucleosome positioning at this motif; targets Isw1p to DNA
S000037892 CDS YJR060W 10 548751 549806 W 2009-02-18 1996-07-31
S000003822 ORF Uncharacterized YJR061W chromosome 10 10 550503 553310 W 2009-02-18 1996-07-31 Putative protein of unknown function; non-essential gene with similarity to Mnn4, a putative membrane protein involved in glycosylation; transcription repressed by Rm101p
S000029930 CDS YJR061W 10 550503 553310 W 2009-02-18 1996-07-31
S000003823 ORF Verified YJR062C NTA1 DEA1 chromosome 10 L000001279 10 554841 553468 C 2009-02-18 1996-07-31 Amidase, removes the amide group from N-terminal asparagine and glutamine residues to generate proteins with N-terminal aspartate and glutamate residues that are targets of ubiquitin-mediated degradation
S000029976 CDS YJR062C 10 554841 553468 C 2009-02-18 1996-07-31
S000003824 ORF Verified YJR063W RPA12 RRN4 chromosome 10 L000001672 10 555187 555564 W 2009-02-18 1996-07-31 RNA polymerase I subunit A12.2; contains two zinc binding domains, and the N terminal domain is responsible for anchoring to the RNA pol I complex
S000031049 CDS YJR063W 10 555187 555564 W 2009-02-18 1996-07-31
S000003825 ORF Verified YJR064W CCT5 TCP5 chromosome 10 L000002717 10 555906 557594 W 2009-02-18 1996-07-31 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of actin and tubulins in vivo
S000031152 CDS YJR064W 10 555906 557594 W 2009-02-18 1996-07-31
S000003826 ORF Verified YJR065C ARP3 ACT4 chromosome 10 L000003198 10 559150 557801 C 2009-02-18 1996-07-31 Essential component of the Arp2/3 complex, which is a highly conserved actin nucleation center required for the motility and integrity of actin patches; involved in endocytosis and membrane growth and polarity
S000031207 CDS YJR065C 10 559150 557801 C 2009-02-18 1996-07-31
S000003827 ORF Verified YJR066W TOR1 DRR1 chromosome 10 L000002322 10 559408 566820 W 44.84 2009-02-18 1996-07-31 PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that controls growth in response to nutrients by regulating translation, transcription, ribosome biogenesis, nutrient transport and autophagy; involved in meiosis
S000032272 CDS YJR066W 10 559408 566820 W 2009-02-18 1996-07-31
S000003828 ORF Verified YJR067C YAE1 chromosome 10 L000004159 10 567436 567011 C 2009-02-18 1996-07-31 Protein of unknown function, essential for growth under standard (aerobic) conditions but not under anaerobic conditions
S000032323 CDS YJR067C 10 567436 567011 C 2009-02-18 1996-07-31
S000003829 ORF Verified YJR068W RFC2 chromosome 10 L000001623 10 567635 568696 W 2009-02-18 1996-07-31 Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon
S000032475 CDS YJR068W 10 567635 568696 W 2009-02-18 1996-07-31
S000003830 ORF Verified YJR069C HAM1 chromosome 10 L000003233 10 569391 568798 C 2009-02-18 1996-07-31 Conserved protein with deoxyribonucleoside triphosphate pyrophosphohydrolase activity, mediates exclusion of noncanonical purines from deoxyribonucleoside triphosphate pools; mutant is sensitive to the base analog 6-N-hydroxylaminopurine
S000034432 CDS YJR069C 10 569391 568798 C 2009-02-18 1996-07-31
S000003832 ORF Dubious YJR071W chromosome 10 10 570397 570765 W 2009-02-18 1996-07-31 Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000033295 CDS YJR071W 10 570397 570765 W 2009-02-18 1996-07-31
S000003831 ORF Verified YJR070C LIA1 MMD1 chromosome 10 10 570590 569613 C 2009-02-18 1996-07-31 Deoxyhypusine hydroxylase, a HEAT-repeat containing metalloenzyme that catalyzes hypusine formation; binds to and is required for the modification of Hyp2p (eIF5A); complements S. pombe mmd1 mutants defective in mitochondrial positioning
S000033205 CDS YJR070C 10 570590 569613 C 2009-02-18 1996-07-31
S000003833 ORF Verified YJR072C NPA3 EPA1 chromosome 10 10 572116 570959 C 2009-02-18 1996-07-31 Essential, conserved, cytoplasmic ATPase; phosphorylated by the Pcl1p-Pho85p kinase complex
S000034114 CDS YJR072C 10 572116 570959 C 2009-02-18 1996-07-31
S000003834 ORF Verified YJR073C OPI3 PEM2 chromosome 10 L000001304 10 572927 572307 C 2009-02-18 1996-07-31 Phospholipid methyltransferase (methylene-fatty-acyl-phospholipid synthase), catalyzes the last two steps in phosphatidylcholine biosynthesis
S000034233 CDS YJR073C 10 572927 572307 C 2009-02-18 1996-07-31
S000003835 ORF Verified YJR074W MOG1 chromosome 10 L000004615 10 573087 573743 W 2009-02-18 1996-07-31 Conserved nuclear protein that interacts with GTP-Gsp1p, which is a Ran homolog of the Ras GTPase family, and stimulates nucleotide release, involved in nuclear protein import, nucleotide release is inhibited by Yrb1p
S000034411 CDS YJR074W 10 573087 573743 W 2009-02-18 1996-07-31
S000003836 ORF Verified YJR075W HOC1 chromosome 10 L000003274 10 573973 575163 W 2009-02-18 1996-07-31 Alpha-1,6-mannosyltransferase involved in cell wall mannan biosynthesis; subunit of a Golgi-localized complex that also contains Anp1p, Mnn9p, Mnn11p, and Mnn10p; identified as a suppressor of a cell lysis sensitive pkc1-371 allele
S000035455 CDS YJR075W 10 573973 575163 W 2009-02-18 1996-07-31
S000003837 ORF Verified YJR076C CDC11 PSL9 chromosome 10 L000000251 10 576593 575346 C 54 2009-02-18 1996-07-31 Component of the septin ring of the mother-bud neck that is required for cytokinesis; septins recruit proteins to the neck and can act as a barrier to diffusion at the membrane, and they comprise the 10nm filaments seen with EM
S000035494 CDS YJR076C 10 576593 575346 C 2009-02-18 1996-07-31
S000003838 ORF Verified YJR077C MIR1 chromosome 10 L000001114 10 578182 577247 C 2009-02-18 1996-07-31 Mitochondrial phosphate carrier, imports inorganic phosphate into mitochondria; functionally redundant with Pic2p but more abundant than Pic2p under normal conditions; phosphorylated
S000035596 CDS YJR077C 10 578182 577247 C 2009-02-18 1996-07-31
S000003839 ORF Verified YJR078W BNA2 chromosome 10 10 578852 580213 W 2009-02-18 1996-07-31 Putative tryptophan 2,3-dioxygenase or indoleamine 2,3-dioxygenase, required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expresssion is upregulated upon telomere uncapping; regulated by Hst1p and Aft2p
S000036561 CDS YJR078W 10 578852 580213 W 2009-02-18 1996-07-31
S000003840 ORF Uncharacterized YJR079W chromosome 10 10 580197 581231 W 2009-02-18 1996-07-31 Putative protein of unknown function; mutation results in impaired mitochondrial respiration
S000036624 CDS YJR079W 10 580197 580339 W 2009-02-18 1996-07-31
S000036625 CDS YJR079W 10 581045 581231 W 2009-02-18 1996-07-31
S000036626 intron YJR079W 10 580340 581044 W 2009-02-18 1996-07-31
S000003841 ORF Verified YJR080C AIM24 FMP26 chromosome 10 10 581608 580424 C 2009-02-18 1996-07-31 Protein of unknown function; the authentic, non-tagged protein is detected in purified mitochondria in high-throughput studies; null mutant displays reduced respiratory growth and elevated frequency of mitochondrial genome loss
S000037402 CDS YJR080C 10 581608 580424 C 2009-02-18 1996-07-31
S000003842 ORF Verified YJR082C EAF6 chromosome 10 10 582247 581906 C 2009-02-18 1996-07-31 Subunit of the NuA4 acetyltransferase complex that acetylates histone H4 and NuA3 acetyltransferase complex that acetylates histone H3
S000030287 CDS YJR082C 10 582247 581906 C 2009-02-18 1996-07-31
S000003843 ORF Verified YJR083C ACF4 chromosome 10 10 583529 582600 C 2009-02-18 1996-07-31 Protein of unknown function, computational analysis of large-scale protein-protein interaction data suggests a possible role in actin cytoskeleton organization; potential Cdc28p substrate
S000030434 CDS YJR083C 10 583529 582600 C 2009-02-18 1996-07-31
S000003844 ORF Verified YJR084W CSN12 chromosome 10 S000007581 10 583725 584996 W 2009-02-18 1996-07-31 Subunit of the Cop9 signalosome, which is required for deneddylation, or removal of the ubiquitin-like protein Rub1p from Cdc53p (cullin); involved in mRNA splicing and adaptation to pheromone signaling
S000031409 CDS YJR084W 10 583725 584996 W 2009-02-18 1996-07-31
S000003845 ORF Uncharacterized YJR085C chromosome 10 10 585429 585112 C 2009-02-18 1996-07-31 Putative protein of unknown function; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
S000031477 CDS YJR085C 10 585429 585112 C 2009-02-18 1996-07-31
S000003846 ORF Verified YJR086W STE18 chromosome 10 L000002122 10 586060 586392 W 59 2009-02-18 1996-07-31 G protein gamma subunit, forms a dimer with Ste4p to activate the mating signaling pathway, forms a heterotrimer with Gpa1p and Ste4p to dampen signaling; C-terminus is palmitoylated and farnesylated, which are required for normal signaling
S000031665 CDS YJR086W 10 586060 586392 W 2009-02-18 1996-07-31
S000003847 ORF Dubious YJR087W chromosome 10 10 586392 586742 W 2009-02-18 1996-07-31 Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; partially overlaps the verified gene STE18 and uncharacterized ORF YJR088C
S000032646 CDS YJR087W 10 586392 586742 W 2009-02-18 1996-07-31
S000003848 ORF Verified YJR088C EMC2 chromosome 10 10 587365 586487 C 2009-02-18 1996-07-31 Member of a transmembrane complex required for efficient folding of proteins in the ER; null mutant displays induction of the unfolded protein response
S000032686 CDS YJR088C 10 587365 586487 C 2009-02-18 1996-07-31
S000003849 ORF Verified YJR089W BIR1 chromosome 10 L000004754 10 587710 590574 W 2009-02-18 1996-07-31 Subunit of chromosomal passenger complex (CPC; Ipl1p-Sli15p-Bir1p-Nbl1p), which regulates chromosome segregation; required for chromosome bi-orientation and for spindle assembly checkpoint activation upon reduced sister kinetochore tension
S000032816 CDS YJR089W 10 587710 590574 W 2009-02-18 1996-07-31
S000003850 ORF Verified YJR090C GRR1 SDC1|SSU2|COT2|CAT80 chromosome 10 L000000730 10 594319 590864 C 60 2009-02-18 1996-07-31 F-box protein component of the SCF ubiquitin-ligase complex; involved in carbon catabolite repression, glucose-dependent divalent cation transport, high-affinity glucose transport, morphogenesis, and sulfite detoxification
S000032905 CDS YJR090C 10 594319 590864 C 2009-02-18 1996-07-31
S000003851 ORF Verified YJR091C JSN1 PUF1 chromosome 10 L000002964 10 598328 595053 C 2009-02-18 1996-07-31 Member of the Puf family of RNA-binding proteins, interacts with mRNAs encoding membrane-associated proteins; involved in localizing the Arp2/3 complex to mitochondria; overexpression causes increased sensitivity to benomyl
S000033011 CDS YJR091C 10 598328 595053 C 2009-02-18 1996-07-31
S000003852 ORF Verified YJR092W BUD4 chromosome 10 L000000201 10 598727 603070 W 2009-02-18 2004-04-20|1996-07-31|1997-07-27|2008-06-04 Protein involved in bud-site selection and required for axial budding pattern; localizes with septins to bud neck in mitosis and may constitute an axial landmark for next round of budding; potential Cdc28p substrate
S000033797 CDS YJR092W 10 598727 603070 W 2009-02-18 2004-04-20|1996-07-31|1997-07-27|2008-06-04
S000003853 ORF Verified YJR093C FIP1 chromosome 10 L000002775 10 604195 603212 C 2009-02-18 1996-07-31 Subunit of cleavage polyadenylation factor (CPF), interacts directly with poly(A) polymerase (Pap1p) to regulate its activity
S000033863 CDS YJR093C 10 604195 603212 C 2009-02-18 1996-07-31
S000003854 ORF Verified YJR094C IME1 chromosome 10 L000000861 10 605643 604561 C 2009-02-18 1996-07-31 Master regulator of meiosis that is active only during meiotic events, activates transcription of early meiotic genes through interaction with Ume6p, degraded by the 26S proteasome following phosphorylation by Ime2p
S000034019 CDS YJR094C 10 605643 604561 C 2009-02-18 1996-07-31
S000003855 ORF Verified YJR094W-A RPL43B chromosome 10 L000004470 10 608297 608850 W 2009-02-18 1996-07-31 Protein component of the large (60S) ribosomal subunit, identical to Rpl43Ap and has similarity to rat L37a ribosomal protein
S000034757 CDS YJR094W-A 10 608297 608298 W 2009-02-18 1996-07-31
S000034758 CDS YJR094W-A 10 608574 608850 W 2009-02-18 1996-07-31
S000034759 intron YJR094W-A 10 608299 608573 W 2009-02-18 1996-07-31
S000003856 ORF Verified YJR095W SFC1 ACR1 chromosome 10 L000000023 10 609765 610733 W 2009-02-18 1996-07-31 Mitochondrial succinate-fumarate transporter, transports succinate into and fumarate out of the mitochondrion; required for ethanol and acetate utilization
S000034990 CDS YJR095W 10 609765 610733 W 2009-02-18 1996-07-31
S000003857 ORF Verified YJR096W chromosome 10 10 611187 612035 W 2009-02-18 1996-07-31 Putative xylose and arabinose reductase; member of the aldo-keto reductase (AKR) family; GFP-fusion protein is induced in response to the DNA-damaging agent MMS
S000035147 CDS YJR096W 10 611187 612035 W 2009-02-18 1996-07-31
S000003858 ORF Verified YJR097W JJJ3 DPH4 chromosome 10 10 612405 612923 W 2009-02-18 1996-07-31 Protein of unknown function, contains a J-domain, which is a region with homology to the E. coli DnaJ protein
S000035313 CDS YJR097W 10 612405 612923 W 2009-02-18 1996-07-31
S000028456 ARS ARS1019 chromosome 10 10 612838 613270 2009-02-18 2002-12-16 Autonomously Replicating Sequence
S000003859 ORF Uncharacterized YJR098C chromosome 10 10 615145 613178 C 2009-02-18 1996-07-31 Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
S000036139 CDS YJR098C 10 615145 613178 C 2009-02-18 1996-07-31
S000003860 ORF Verified YJR099W YUH1 chromosome 10 L000002565 10 615565 616275 W 57 2009-02-18 1996-07-31 Ubiquitin C-terminal hydrolase that cleaves ubiquitin-protein fusions to generate monomeric ubiquitin; hydrolyzes the peptide bond at the C-terminus of ubiquitin; also the major processing enzyme for the ubiquitin-like protein Rub1p
S000036337 CDS YJR099W 10 615565 616275 W 2009-02-18 1996-07-31
S000003861 ORF Verified YJR100C AIM25 chromosome 10 10 617323 616340 C 2009-02-18 1996-07-31 Putative protein of unknown function; non-tagged protein is detected in purified mitochondria in high-throughput studies; similar to murine NOR1; null mutant is viable and displays elevated frequency of mitochondrial genome loss
S000033573 CDS YJR100C 10 617323 616340 C 2009-02-18 1996-07-31
S000006654 tRNA tL(UAG)J chromosome 10 L000003616 10 617908 618008 W 2009-02-18 2000-05-19 tRNA-Leu
S000035855 intron tL(UAG)J 10 617946 617964 W 2009-02-18 2000-05-19
S000035853 noncoding_exon tL(UAG)J 10 617908 617945 W 2009-02-18 2000-05-19
S000035854 noncoding_exon tL(UAG)J 10 617965 618008 W 2009-02-18 2000-05-19
S000003862 ORF Verified YJR101W RSM26 chromosome 10 10 618223 619023 W 2009-02-18 1996-07-31 Mitochondrial ribosomal protein of the small subunit
S000034505 CDS YJR101W 10 618223 619023 W 2009-02-18 1996-07-31
S000003863 ORF Verified YJR102C VPS25 VPL12|VPT25 chromosome 10 10 619754 619146 C 2009-02-18 1996-07-31 Component of the ESCRT-II complex, which is involved in ubiquitin-dependent sorting of proteins into the endosome
S000034557 CDS YJR102C 10 619754 619146 C 2009-02-18 1996-07-31
S000003864 ORF Verified YJR103W URA8 chromosome 10 L000002437 10 620743 622437 W 2009-02-18 1996-07-31 Minor CTP synthase isozyme (see also URA7), catalyzes the ATP-dependent transfer of the amide nitrogen from glutamine to UTP, forming CTP, the final step in de novo biosynthesis of pyrimidines; involved in phospholipid biosynthesis
S000034718 CDS YJR103W 10 620743 622437 W 2009-02-18 1996-07-31
S000003865 ORF Verified YJR104C SOD1 CRS4 chromosome 10 L000001978 10 623002 622538 C 2009-02-18 1996-07-31 Cytosolic copper-zinc superoxide dismutase; some mutations are analogous to those that cause ALS (amyotrophic lateral sclerosis) in humans
S000035647 CDS YJR104C 10 623002 622538 C 2009-02-18 1996-07-31
S000003866 ORF Verified YJR105W ADO1 chromosome 10 10 623569 624591 W 2009-02-18 1996-07-31 Adenosine kinase, required for the utilization of S-adenosylmethionine (AdoMet); may be involved in recycling adenosine produced through the methyl cycle
S000035831 CDS YJR105W 10 623569 624591 W 2009-02-18 1996-07-31
S000003867 ORF Verified YJR106W ECM27 chromosome 10 L000003898 10 624826 627003 W 2009-02-18 1996-07-31 Non-essential protein of unknown function
S000035951 CDS YJR106W 10 624826 627003 W 2009-02-18 1996-07-31
S000003868 ORF Uncharacterized YJR107W chromosome 10 10 627329 628315 W 2009-02-18 1996-07-31 Putative protein of unknown function; has sequence or structural similarity to lipases
S000037815 CDS YJR107W 10 627329 628315 W 2009-02-18 1996-07-31
S000003869 ORF Verified YJR108W ABM1 chromosome 10 10 628702 629073 W 2009-02-18 1996-07-31 Protein of unknown function, required for normal microtubule organization
S000037909 CDS YJR108W 10 628702 629073 W 2009-02-18 1996-07-31
S000003870 ORF Verified YJR109C CPA2 chromosome 10 L000000400 10 632931 629575 C 2009-02-18 1996-07-31 Large subunit of carbamoyl phosphate synthetase, which catalyzes a step in the synthesis of citrulline, an arginine precursor
S000029885 CDS YJR109C 10 632931 629575 C 2009-02-18 1996-07-31
S000003871 ORF Verified YJR110W YMR1 chromosome 10 10 633605 635671 W 2009-02-18 1996-07-31 Phosphatidylinositol 3-phosphate (PI3P) phosphatase; involved in various protein sorting pathways, including CVT targeting and endosome to vacuole transport; has similarity to the conserved myotubularin dual specificity phosphatase family
S000037677 CDS YJR110W 10 633605 635671 W 2009-02-18 1996-07-31
S000003872 ORF Uncharacterized YJR111C chromosome 10 10 636696 635845 C 2009-02-18 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the mitochondria
S000037709 CDS YJR111C 10 636696 635845 C 2009-02-18 1996-07-31
S000003873 ORF Verified YJR112W NNF1 chromosome 10 L000003072 10 637020 637625 W 2009-02-18 1996-07-31 Essential component of the MIND kinetochore complex (Mtw1p Including Nnf1p-Nsl1p-Dsn1p) which joins kinetochore subunits contacting DNA to those contacting microtubules; required for accurate chromosome segregation
S000037783 CDS YJR112W 10 637020 637625 W 2009-02-18 1996-07-31
S000028513 ORF Uncharacterized YJR112W-A chromosome 10 10 637780 638158 W 2009-02-18 2003-07-29 Putative protein of unknown function; identified based on homology to Ashbya gossypii
S000030277 CDS YJR112W-A 10 637780 637799 W 2009-02-18 2003-07-29
S000030278 CDS YJR112W-A 10 637849 638158 W 2009-02-18 2003-07-29
S000030279 intron YJR112W-A 10 637800 637848 W 2009-02-18 2003-07-29
S000003875 ORF Dubious YJR114W SRF2 chromosome 10 10 638649 639041 W 2009-02-18 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF RSM7/YJR113C
S000030784 CDS YJR114W 10 638649 639041 W 2009-02-18 1996-07-31
S000003874 ORF Verified YJR113C RSM7 chromosome 10 10 638965 638222 C 2009-02-18 1996-07-31 Mitochondrial ribosomal protein of the small subunit, has similarity to E. coli S7 ribosomal protein
S000030623 CDS YJR113C 10 638965 638222 C 2009-02-18 1996-07-31
S000003876 ORF Uncharacterized YJR115W chromosome 10 10 639932 640441 W 2009-02-18 1996-07-31 Putative protein of unknown function
S000030893 CDS YJR115W 10 639932 640441 W 2009-02-18 1996-07-31
S000003877 ORF Uncharacterized YJR116W chromosome 10 10 640815 641654 W 2009-02-18 1996-07-31 Putative protein of unknown function
S000031858 CDS YJR116W 10 640815 641654 W 2009-02-18 1996-07-31
S000003878 ORF Verified YJR117W STE24 PIO2|AFC1 chromosome 10 L000003457 10 641997 643358 W 2009-02-18 1996-07-31 Highly conserved zinc metalloprotease that functions in two steps of a-factor maturation, C-terminal CAAX proteolysis and the first step of N-terminal proteolytic processing; contains multiple transmembrane spans
S000032024 CDS YJR117W 10 641997 643358 W 2009-02-18 1996-07-31
S000003879 ORF Verified YJR118C ILM1 chromosome 10 10 644091 643480 C 2009-02-18 1996-07-31 Protein of unknown function; may be involved in mitochondrial DNA maintenance; required for slowed DNA synthesis-induced filamentous growth
S000032105 CDS YJR118C 10 644091 643480 C 2009-02-18 1996-07-31
S000003880 ORF Verified YJR119C JHD2 KDM5 chromosome 10 10 646480 644294 C 2009-02-18 1996-07-31 JmjC domain family histone demethylase specific for H3-K4 (histone H3 Lys4); removes methyl groups specifically added by Set1p methyltransferase; protein levels regulated by Not4p (E3 ubiquitin ligase) polyubiquitin-mediated degradation
S000034072 CDS YJR119C 10 646480 644294 C 2009-02-18 1996-07-31
S000003881 ORF Verified YJR120W chromosome 10 10 647116 647466 W 2009-02-18 1996-07-31 Protein of unknown function; essential for growth under anaerobic conditions; mutation causes decreased expression of ATP2, impaired respiration, defective sterol uptake, and altered levels/localization of ABC transporters Aus1p and Pdr11p
S000032979 CDS YJR120W 10 647116 647466 W 2009-02-18 1996-07-31
S000003882 ORF Verified YJR121W ATP2 chromosome 10 L000000142 10 647597 649132 W 2009-02-18 1996-07-31 Beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis; phosphorylated
S000033071 CDS YJR121W 10 647597 649132 W 2009-02-18 1996-07-31
S000003883 ORF Verified YJR122W IBA57 CAF17 chromosome 10 L000003419 10 649766 651259 W 2009-02-18 1996-07-31 Mitochondrial matrix protein involved in the incorporation of iron-sulfur clusters into mitochondrial aconitase-type proteins; activates the radical-SAM family members Bio2p and Lip5p; interacts with Ccr4p in the two-hybrid system
S000033750 CDS YJR122W 10 649766 651259 W 2009-02-18 1996-07-31
S000003884 ORF Verified YJR123W RPS5 chromosome 10 L000002821 10 651891 652568 W 2009-02-18 1996-07-31 Protein component of the small (40S) ribosomal subunit, the least basic of the non-acidic ribosomal proteins; phosphorylated in vivo; essential for viability; has similarity to E. coli S7 and rat S5 ribosomal proteins
S000033852 CDS YJR123W 10 651891 652568 W 2009-02-18 1996-07-31
S000003885 ORF Uncharacterized YJR124C chromosome 10 10 654228 652882 C 2009-02-18 1996-07-31 Putative protein of unknown function; expression induced under calcium shortage
S000033876 CDS YJR124C 10 654228 652882 C 2009-02-18 1996-07-31
S000028457 ARS ARS1020 ARSX-654 chromosome 10 10 654365 654604 2009-02-18 2002-12-16|2006-09-07 Autonomously Replicating Sequence
S000003886 ORF Verified YJR125C ENT3 chromosome 10 10 655953 654727 C 2009-02-18 1996-07-31 Protein containing an N-terminal epsin-like domain involved in clathrin recruitment and traffic between the Golgi and endosomes; associates with the clathrin adaptor Gga2p
S000034017 CDS YJR125C 10 655953 654727 C 2009-02-18 1996-07-31
S000003887 ORF Verified YJR126C VPS70 chromosome 10 10 658679 656244 C 2009-02-18 1996-07-31 Protein of unknown function involved in vacuolar protein sorting
S000034920 CDS YJR126C 10 658679 656244 C 2009-02-18 1996-07-31
S000003889 ORF Dubious YJR128W chromosome 10 10 662911 663270 W 2009-02-18 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF RSF2
S000036069 CDS YJR128W 10 662911 663270 W 2009-02-18 1996-07-31
S000003888 ORF Verified YJR127C RSF2 ZMS1 chromosome 10 L000002569 10 663049 658907 C 2009-02-18 1996-07-31 Zinc-finger protein involved in transcriptional control of both nuclear and mitochondrial genes, many of which specify products required for glycerol-based growth, respiration, and other functions
S000035071 CDS YJR127C 10 663049 658907 C 2009-02-18 1996-07-31
S000006492 snoRNA snR3 SNR3 chromosome 10 L000001958 10 663739 663932 W 2009-02-18 2000-05-19|2007-05-08 H/ACA box small nucleolar RNA (snoRNA); guides pseudouridylation of large subunit (LSU) rRNA at positions U2129, U2133, and U2264
S000034301 noncoding_exon snR3 10 663739 663932 W 2009-02-18 2000-05-19|2007-05-08
S000003890 ORF Uncharacterized YJR129C chromosome 10 10 665009 663990 C 2009-02-18 1996-07-31 Putative protein of unknown function; predicted S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm
S000036155 CDS YJR129C 10 665009 663990 C 2009-02-18 1996-07-31
S000003891 ORF Verified YJR130C STR2 chromosome 10 10 667127 665208 C 2009-02-18 1996-07-31 Cystathionine gamma-synthase, converts cysteine into cystathionine
S000036945 CDS YJR130C 10 667127 665208 C 2009-02-18 1996-07-31
S000003892 ORF Verified YJR131W MNS1 chromosome 10 L000001130 10 667634 669283 W 2009-02-18 1996-07-31 Alpha-1,2-mannosidase involved in ER quality control; catalyzes the removal of one mannose residue from Man9GlcNAc to produce a single isomer of Man8GlcNAc in N-linked oligosaccharide biosynthesis; integral to ER membrane
S000037068 CDS YJR131W 10 667634 669283 W 2009-02-18 1996-07-31
S000003893 ORF Verified YJR132W NMD5 KAP119 chromosome 10 L000002939 10 669512 672658 W 2009-02-18 1996-07-31 Karyopherin, a carrier protein involved in nuclear import of proteins; importin beta homolog
S000037153 CDS YJR132W 10 669512 672658 W 2009-02-18 1996-07-31
S000003894 ORF Verified YJR133W XPT1 chromosome 10 10 672981 673610 W 2009-02-18 1996-07-31 Xanthine-guanine phosphoribosyl transferase, required for xanthine utilization and for optimal utilization of guanine
S000037899 CDS YJR133W 10 672981 673610 W 2009-02-18 1996-07-31
S000003895 ORF Verified YJR134C SGM1 chromosome 10 10 675842 673719 C 2009-02-18 1996-07-31 Protein of unknown function, required for wild-type growth rate on galactose and mannose; localizes to COPI coated vesicles and the Golgi apparatus
S000029858 CDS YJR134C 10 675842 673719 C 2009-02-18 1996-07-31
S000003896 ORF Verified YJR135C MCM22 chromosome 10 L000003999 10 676768 676049 C 2009-02-18 1996-07-31 Protein involved in minichromosome maintenance; component of the kinetochore; binds to centromeric DNA in a Ctf19p-dependent manner
S000030000 CDS YJR135C 10 676768 676049 C 2009-02-18 1996-07-31
S000007348 ORF Verified YJR135W-A TIM8 chromosome 10 10 676961 677224 W 2009-02-18 1999-07-17 Mitochondrial intermembrane space protein, forms a complex with Tim13p that delivers a subset of hydrophobic proteins to the TIM22 complex for inner membrane insertion; homolog of human TIMM8A, implicated in Mohr-Tranebjaerg syndrome
S000032075 CDS YJR135W-A 10 676961 677224 W 2009-02-18 1999-07-17
S000003897 ORF Verified YJR136C TTI2 chromosome 10 10 678696 677431 C 2009-02-18 1996-07-31 Putative protein of unknown function; subunit of the ASTRA complex which is part of the chromatin remodeling machinery; similar to S. pombe Tti2p; may interact with Rsm23p; GFP-fusion protein localizes to the cytoplasm
S000030982 CDS YJR136C 10 678696 677431 C 2009-02-18 1996-07-31
S000003898 ORF Verified YJR137C MET5 ECM17 chromosome 10 L000001080|L000003892 10 683275 678947 C 84 2009-02-18 1996-07-31 Sulfite reductase beta subunit, involved in amino acid biosynthesis, transcription repressed by methionine
S000031082 CDS YJR137C 10 683275 678947 C 2009-02-18 1996-07-31
S000007553 ARS ARS1021 ARS121 chromosome 10 10 683624 684112 2009-02-18 2000-10-17 Autonomously Replicating Sequence
S000003899 ORF Verified YJR138W IML1 chromosome 10 10 684557 689311 W 2009-02-18 1996-07-31 Protein of unknown function, green fluorescent protein (GFP)-fusion protein localizes to the vacuolar membrane
S000031284 CDS YJR138W 10 684557 689311 W 2009-02-18 1996-07-31
S000003900 ORF Verified YJR139C HOM6 chromosome 10 L000000801 10 690514 689435 C 87 2009-02-18 1996-07-31 Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase), dimeric enzyme that catalyzes the third step in the common pathway for methionine and threonine biosynthesis; enzyme has nucleotide-binding, dimerization and catalytic regions
S000032214 CDS YJR139C 10 690514 689435 C 2009-02-18 1996-07-31
S000028666 ORF Dubious YJR140W-A chromosome 10 10 690951 691100 W 2009-02-18 2003-07-29 Dubious open reading frame; completely overlaps the verified gene HIR3; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching
S000032491 CDS YJR140W-A 10 690951 691100 W 2009-02-18 2003-07-29
S000003901 ORF Verified YJR140C HIR3 HPC1 chromosome 10 L000003127 10 695686 690740 C 2009-02-18 1996-07-31 Subunit of the HIR complex, a nucleosome assembly complex involved in regulation of histone gene transcription; involved in position-dependent gene silencing and nucleosome reassembly
S000032216 CDS YJR140C 10 695686 690740 C 2009-02-18 1996-07-31
S000003902 ORF Uncharacterized YJR141W chromosome 10 10 695896 696939 W 2009-02-18 1996-07-31 Essential protein of unknown function
S000033127 CDS YJR141W 10 695896 696939 W 2009-02-18 1996-07-31
S000003903 ORF Uncharacterized YJR142W chromosome 10 10 697131 698159 W 2009-02-18 1996-07-31 Putative protein of unknown function; GST fusion protein is a Dbf2-Mob1 phosphoylation target in a proteome chip analysis; synthetic lethal with PH085 deletion; plays a role in restricting Ty1 transposition
S000033186 CDS YJR142W 10 697131 698159 W 2009-02-18 1996-07-31
S000003904 ORF Verified YJR143C PMT4 chromosome 10 L000002623 10 700604 698316 C 2009-02-18 1996-07-31 Protein O-mannosyltransferase, transfers mannose residues from dolichyl phosphate-D-mannose to protein serine/threonine residues; appears to form homodimers in vivo and does not complex with other Pmt proteins; target for new antifungals
S000033214 CDS YJR143C 10 700604 698316 C 2009-02-18 1996-07-31
S000003905 ORF Verified YJR144W MGM101 MGM9 chromosome 10 L000001104 10 700872 701681 W 2009-02-18 1996-07-31 Protein involved in mitochondrial genome maintenance; component of the mitochondrial nucleoid, required for the repair of oxidative mtDNA damage
S000033297 CDS YJR144W 10 700872 701681 W 2009-02-18 1996-07-31
S000003906 ORF Verified YJR145C RPS4A chromosome 10 L000001751 10 703058 702017 C 2009-02-18 1996-07-31 Protein component of the small (40S) ribosomal subunit; mutation affects 20S pre-rRNA processing; identical to Rps4Bp and has similarity to rat S4 ribosomal protein
S000034116 CDS YJR145C 10 702788 702017 C 2009-02-18 1996-07-31
S000034115 CDS YJR145C 10 703058 703045 C 2009-02-18 1996-07-31
S000034117 intron YJR145C 10 703044 702789 C 2009-02-18 1996-07-31
S000003907 ORF Dubious YJR146W chromosome 10 10 703875 704228 W 2009-02-18 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene HMS2
S000034307 CDS YJR146W 10 703875 704228 W 2009-02-18 1996-07-31
S000003908 ORF Verified YJR147W HMS2 chromosome 10 L000004442 10 704186 705262 W 2009-02-18 1996-07-31 Protein with similarity to heat shock transcription factors; overexpression suppresses the pseudohyphal filamentation defect of a diploid mep1 mep2 homozygous null mutant
S000034417 CDS YJR147W 10 704186 705262 W 2009-02-18 1996-07-31
S000003909 ORF Verified YJR148W BAT2 ECA40|TWT2 chromosome 10 L000003082 10 705734 706864 W 2009-02-18 1996-07-31 Cytosolic branched-chain amino acid aminotransferase, homolog of murine ECA39; highly expressed during stationary phase and repressed during logarithmic phase
S000035457 CDS YJR148W 10 705734 706864 W 2009-02-18 1996-07-31
S000003910 ORF Uncharacterized YJR149W chromosome 10 10 707150 708364 W 2009-02-18 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm
S000035545 CDS YJR149W 10 707150 708364 W 2009-02-18 1996-07-31
S000003911 ORF Verified YJR150C DAN1 CCW13 chromosome 10 L000003381 10 709697 708801 C 2009-02-18 1996-07-31 Cell wall mannoprotein with similarity to Tir1p, Tir2p, Tir3p, and Tir4p; expressed under anaerobic conditions, completely repressed during aerobic growth
S000036513 CDS YJR150C 10 709697 708801 C 2009-02-18 1996-07-31
S000028458 ARS ARS1022 ARSX-712 chromosome 10 10 711886 712132 2009-02-18 2002-12-16|2006-09-07 Autonomously Replicating Sequence
S000003912 ORF Verified YJR151C DAN4 chromosome 10 10 715730 712245 C 2009-02-18 1996-07-31 Cell wall mannoprotein with similarity to Tir1p, Tir2p, Tir3p, and Tir4p; expressed under anaerobic conditions, completely repressed during aerobic growth
S000036600 CDS YJR151C 10 715730 712245 C 2009-02-18 1996-07-31
S000028557 ORF Uncharacterized YJR151W-A chromosome 10 10 717570 717620 W 2009-02-18 2003-07-29 Putative protein of unknown function; identified by fungal homology and RT-PCR; predicted to have a role in transcription based on computational "guilt by association" analysis
S000031243 CDS YJR151W-A 10 717570 717620 W 2009-02-18 2003-07-29
S000003913 ORF Verified YJR152W DAL5 UREP1 chromosome 10 L000000478 10 719656 721287 W 97 2009-02-18 1996-07-31 Allantoate permease; ureidosuccinate permease; also transports dipeptides, though with lower affinity than for allantoate and ureidosuccinate; expression is constitutive but sensitive to nitrogen catabolite repression
S000037362 CDS YJR152W 10 719656 721287 W 2009-02-18 1996-07-31
S000003914 ORF Verified YJR153W PGU1 PSM1|PGL1 chromosome 10 L000004371|L000004261 10 722805 723890 W 2009-02-18 1996-07-31 Endo-polygalacturonase, pectolytic enzyme that hydrolyzes the alpha-1,4-glycosidic bonds in the rhamnogalacturonan chains in pectins
S000037481 CDS YJR153W 10 722805 723890 W 2009-02-18 1996-07-31
S000003915 ORF Uncharacterized YJR154W chromosome 10 10 725774 726814 W 2009-02-18 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm
S000030205 CDS YJR154W 10 725774 726814 W 2009-02-18 1996-07-31
S000003916 ORF Verified YJR155W AAD10 chromosome 10 L000004639 10 727395 728261 W 2009-02-18 1996-07-31 Putative aryl-alcohol dehydrogenase with similarity to P. chrysosporium aryl-alcohol dehydrogenase; mutational analysis has not yet revealed a physiological role
S000030387 CDS YJR155W 10 727395 728261 W 2009-02-18 1996-07-31
S000003917 ORF Verified YJR156C THI11 chromosome 10 L000003222 10 729586 728564 C 2009-02-18 1996-07-31 Protein involved in synthesis of the thiamine precursor hydroxymethylpyrimidine (HMP); member of a subtelomeric gene family including THI5, THI11, THI12, and THI13
S000030438 CDS YJR156C 10 729586 728564 C 2009-02-18 1996-07-31
S000028459 ARS ARS1023 chromosome 10 10 729973 730503 2009-02-18 2002-12-16 Autonomously Replicating Sequence
S000003918 ORF Dubious YJR157W chromosome 10 10 730505 730867 W 2009-02-18 1996-07-31 Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000031435 CDS YJR157W 10 730505 730867 W 2009-02-18 1996-07-31
S000003919 ORF Verified YJR158W HXT16 chromosome 10 L000003264 10 732430 734133 W 2009-02-18 1996-07-31 Protein of unknown function with similarity to hexose transporter family members, expression is repressed by high levels of glucose
S000031532 CDS YJR158W 10 732430 734133 W 2009-02-18 1996-07-31
S000003920 ORF Verified YJR159W SOR1 SDH1 chromosome 10 L000002753 10 736034 737107 W 2009-02-18 1996-07-31 Sorbitol dehydrogenase; expression is induced in the presence of sorbitol or xylose
S000031666 CDS YJR159W 10 736034 737107 W 2009-02-18 1996-07-31
S000028460 ARS ARS1024 ARSX-737 chromosome 10 10 737024 737265 2009-02-18 2002-12-16|2006-09-07 Autonomously Replicating Sequence
S000003921 ORF Verified YJR160C MPH3 chromosome 10 10 739806 737998 C 2009-02-18 1996-07-31 Alpha-glucoside permease, transports maltose, maltotriose, alpha-methylglucoside, and turanose; identical to Mph2p; encoded in a subtelomeric position in a region likely to have undergone duplication
S000031772 CDS YJR160C 10 739806 737998 C 2009-02-18 1996-07-31
S000003922 ORF Verified YJR161C COS5 chromosome 10 L000004063 10 743989 742838 C 2009-02-18 1996-07-31 Protein of unknown function, member the DUP380 subfamily of conserved, often subtelomerically-encoded proteins
S000031918 CDS YJR161C 10 743989 742838 C 2009-02-18 1996-07-31
S000028461 ARS ARS1025 chromosome 10 10 744398 744998 2009-02-18 2002-12-16 Autonomously Replicating Sequence
S000028974 telomere TEL10R chromosome 10 10 744892 745741 W 100 2009-02-18 2003-09-09 Telomeric region on the right arm of Chromosome X, composed of an X element core sequence, X element combinatorial repeats, and a short terminal stretch of telomeric repeats
S000028976 X_element_core_sequence TEL10R-XC chromosome 10 10 744892 745351 W 2009-02-18 2003-09-09 Telomeric X element Core sequence on the right arm of Chromosome X; contains an ARS consensus sequence, an Abf1p binding site consensus sequence, and ORF YJR162C
S000035847 ARS consensus sequence TEL10R-XC 10 744930 744940 W 2009-02-18 2003-09-09
S000035848 binding_site TEL10R-XC 10 745149 745161 W 2009-02-18 2003-09-09
S000003923 ORF Dubious YJR162C chromosome 10 10 745251 744901 C 2009-02-18 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000032831 CDS YJR162C 10 745251 744901 C 2009-02-18 1996-07-31
S000028977 X_element_combinatorial_repeats TEL10R-XR chromosome 10 10 745352 745652 W 2009-02-18 2003-09-09 Telomeric X element combinatorial Repeat region on the right arm of Chromosome X; contains repeats of the D, C, B and A types, as well as Tbf1p binding sites; formerly called SubTelomeric Repeats
S000028975 telomeric_repeat TEL10R-TR chromosome 10 10 745653 745741 W 2009-02-18 2003-09-09 Terminal stretch of telomeric repeats on the right arm of Chromosome X
S000028907 telomeric_repeat TEL11L-TR chromosome 11 11 67 1 C 2003-09-09 2003-09-09 Terminal stretch of telomeric repeats on the left arm of Chromosome XI
S000028909 X_element_combinatorial_repeats TEL11L-XR chromosome 11 11 346 68 C 2003-09-09 2003-09-09 Telomeric X element combinatorial Repeat region on the left arm of Chromosome XI; contains repeats of the D, C, B and A types, as well as Tbf1p binding sites; formerly called SubTelomeric Repeats
S000001708 ORF Dubious YKL225W chromosome 11 11 452 799 W 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000032685 CDS YKL225W 11 452 799 W 1996-07-31 1996-07-31
S000028906 telomere TEL11L chromosome 11 11 808 1 C -162 2003-09-09 2003-09-09 Telomeric region on the left arm of Chromosome XI, composed of an X element core sequence, X element combinatorial repeats, and a short terminal stretch of telomeric repeats
S000028908 X_element_core_sequence TEL11L-XC chromosome 11 11 808 347 C 2003-09-09 2003-09-09 Telomeric X element Core sequence on the left arm of Chromosome XI; contains an ARS consensus sequence, an Abf1p binding site consensus sequence, and ORF YKL225W
S000034744 ARS consensus sequence TEL11L-XC 11 770 760 C 2003-09-09 2003-09-09
S000034745 binding_site TEL11L-XC 11 551 539 C 2003-09-09 2003-09-09
S000001707 ORF Verified YKL224C PAU16 chromosome 11 11 2182 1811 C 1996-07-31 1996-07-31 Protein of unknown function, member of the seripauperin multigene family encoded mainly in subtelomeric regions
S000031625 CDS YKL224C 11 2182 1811 C 1996-07-31 1996-07-31
S000001706 ORF Dubious YKL223W chromosome 11 11 2390 2722 W 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000031556 CDS YKL223W 11 2390 2722 W 1996-07-31 1996-07-31
S000001705 ORF Verified YKL222C chromosome 11 11 5621 3504 C 1996-07-31 1996-07-31 Protein of unknown function that may interact with ribosomes, based on co-purification experiments; similar to transcriptional regulators from the zinc cluster (binuclear cluster) family; null mutant is sensitive to caffeine
S000031466 CDS YKL222C 11 5621 3504 C 1996-07-31 1996-07-31
S000001704 ORF Verified YKL221W MCH2 chromosome 11 11 6108 7529 W 1996-07-31 1996-07-31 Protein with similarity to mammalian monocarboxylate permeases, which are involved in transport of monocarboxylic acids across the plasma membrane; mutant is not deficient in monocarboxylate transport
S000031419 CDS YKL221W 11 6108 7529 W 1996-07-31 1996-07-31
S000130137 ARS ARS1102 ARSXI-8 chromosome 11 11 7529 8310 2009-05-06 2009-05-06 Putative replication origin, identified in multiple array studies, not yet confirmed by plasmid-based assay
S000001703 ORF Verified YKL220C FRE2 chromosome 11 L000002805 11 11227 9092 C 1996-07-31 1996-07-31 Ferric reductase and cupric reductase, reduces siderophore-bound iron and oxidized copper prior to uptake by transporters; expression induced by low iron levels but not by low copper levels
S000031305 CDS YKL220C 11 11227 9092 C 1996-07-31 1996-07-31
S000001702 ORF Verified YKL219W COS9 chromosome 11 L000004067 11 14485 15708 W 1996-07-31 1996-07-31 Protein of unknown function, member of the DUP380 subfamily of conserved, often subtelomerically-encoded proteins
S000030515 CDS YKL219W 11 14485 15708 W 1996-07-31 1996-07-31
S000001701 ORF Verified YKL218C SRY1 chromosome 11 S000007485 11 18339 17359 C 1996-07-31 1996-07-31 3-hydroxyaspartate dehydratase, deaminates L-threo-3-hydroxyaspartate to form oxaloacetate and ammonia; required in the presence of hydroxyaspartate; highly similar to mouse serine racemase (Srr) but has no serine racemase activity
S000037646 CDS YKL218C 11 18339 17359 C 1996-07-31 1996-07-31
S000001700 ORF Verified YKL217W JEN1 chromosome 11 L000002666 11 22234 24084 W 1996-07-31 1996-07-31 Lactate transporter, required for uptake of lactate and pyruvate; phosphorylated; expression is derepressed by transcriptional activator Cat8p during respiratory growth, and repressed in the presence of glucose, fructose, and mannose
S000037602 CDS YKL217W 11 22234 24084 W 1996-07-31 1996-07-31
S000001699 ORF Verified YKL216W URA1 chromosome 11 L000002430 11 25216 26160 W -159.7 1996-07-31 1996-07-31 Dihydroorotate dehydrogenase, catalyzes the fourth enzymatic step in the de novo biosynthesis of pyrimidines, converting dihydroorotic acid into orotic acid
S000037467 CDS YKL216W 11 25216 26160 W 1996-07-31 1996-07-31
S000001698 ORF Uncharacterized YKL215C chromosome 11 11 30688 26828 C 1996-07-31 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm
S000036677 CDS YKL215C 11 30688 26828 C 1996-07-31 1996-07-31
S000001697 ORF Verified YKL214C YRA2 chromosome 11 11 31694 31083 C 1996-07-31 1996-07-31 Member of the REF (RNA and export factor binding proteins) family; when overexpressed, can substitute for the function of Yra1p in export of poly(A)+ mRNA from the nucleus
S000036577 CDS YKL214C 11 31694 31083 C 1996-07-31 1996-07-31
S000001696 ORF Verified YKL213C DOA1 ZZZ4|UFD3 chromosome 11 L000002961 11 34108 31961 C 1996-07-31 1996-07-31 WD repeat protein required for ubiquitin-mediated protein degradation, forms complex with Cdc48p, plays a role in controlling cellular ubiquitin concentration; also promotes efficient NHEJ in postdiauxic/stationary phase
S000036488 CDS YKL213C 11 34108 31961 C 1996-07-31 1996-07-31
S000001695 ORF Verified YKL212W SAC1 RSD1 chromosome 11 L000001790 11 34544 36415 W -153.8 1996-07-31 1996-07-31 Phosphatidylinositol phosphate (PtdInsP) phosphatase involved in hydrolysis of PtdIns[4]P; transmembrane protein localizes to ER and Golgi; involved in protein trafficking and processing, secretion, and cell wall maintenance
S000036459 CDS YKL212W 11 34544 36415 W 1996-07-31 1996-07-31
S000001694 ORF Verified YKL211C TRP3 chromosome 11 L000002354 11 38154 36700 C -153.8 1996-07-31 1996-07-31 Bifunctional enzyme exhibiting both indole-3-glycerol-phosphate synthase and anthranilate synthase activities, forms multifunctional hetero-oligomeric anthranilate synthase:indole-3-glycerol phosphate synthase enzyme complex with Trp2p
S000035520 CDS YKL211C 11 38154 36700 C 1996-07-31 1996-07-31
S000006455 snoRNA snR64 SNR64 chromosome 11 L000004533 11 38812 38912 W 2000-05-19 2000-05-19 C/D box small nucleolar RNA (snoRNA), guides 2'-O-methylation of large subunit (LSU) rRNA at position C2337
S000030843 noncoding_exon snR64 11 38812 38912 W 2000-05-19 2000-05-19
S000001693 ORF Verified YKL210W UBA1 chromosome 11 L000002405 11 39164 42238 W -153.3 1996-07-31 1996-07-31 Ubiquitin activating enzyme (E1), involved in ubiquitin-mediated protein degradation and essential for viability
S000035493 CDS YKL210W 11 39164 42238 W 1996-07-31 1996-07-31
S000001692 ORF Verified YKL209C STE6 chromosome 11 L000002116 11 46296 42424 C -152.3 1996-07-31 1996-07-31 Plasma membrane ATP-binding cassette (ABC) transporter required for the export of a-factor, catalyzes ATP hydrolysis coupled to a-factor transport; contains 12 transmembrane domains and two ATP binding domains; expressed only in MATa cells
S000035512 CDS YKL209C 11 46296 42424 C 1996-07-31 1996-07-31
S000006748 tRNA tT(CGU)K TRT2 chromosome 11 L000003644 11 46807 46736 C 2000-05-19 2000-05-19 tRNA-Thr; tRNA threonine 2
S000032223 noncoding_exon tT(CGU)K 11 46807 46736 C 2000-05-19 2000-05-19
S000001691 ORF Verified YKL208W CBT1 SOC1 chromosome 11 L000004295|S000029465|L000004597 11 47158 47973 W 1996-07-31 1996-07-31 Protein involved in 5' end processing of mitochondrial COB, 15S_rRNA, and RPM1 transcripts; may also have a role in 3' end processing of the COB pre-mRNA; displays genetic interaction with cell cycle-regulated kinase Dbf2p
S000034559 CDS YKL208W 11 47158 47973 W 1996-07-31 1996-07-31
S000001690 ORF Verified YKL207W AIM27 EMC3|LRC3 chromosome 11 11 48195 48956 W 2006-05-08 2004-02-13|2006-05-08|1996-07-31 Member of a transmembrane complex required for efficient folding of proteins in the ER; required for respiratory growth; null mutant displays induction of the unfolded protein response
S000034425 CDS YKL207W 11 48195 48956 W 2006-05-08 2004-02-13|1996-07-31|2006-05-08
S000001689 ORF Verified YKL206C ADD66 POC2|PBA2 chromosome 11 11 49810 49007 C 2004-02-13 1996-07-31 Protein involved in 20S proteasome assembly; forms a heterodimer with Pba1p that binds to proteasome precursors; similar to human PAC2 constituent of the PAC1-PAC2 complex involved in proteasome assembly
S000034304 CDS YKL206C 11 49810 49007 C 2004-02-13 1996-07-31
S000001688 ORF Verified YKL205W LOS1 chromosome 11 L000000950 11 50052 53354 W -149.7 2004-02-13 1996-07-31 Nuclear pore protein involved in nuclear export of pre-tRNA and in re-export of mature tRNAs after their retrograde import from the cytoplasm
S000034266 CDS YKL205W 11 50052 53354 W 2004-02-13 1996-07-31
S000001687 ORF Verified YKL204W EAP1 chromosome 11 11 53705 55603 W 2004-02-13 1996-07-31 eIF4E-associated protein, competes with eIF4G for binding to eIF4E; inhibits cap-dependent translation; functions independently of eIF4E to maintain genetic stability; plays a role in cell growth, implicated in the TOR signaling cascade
S000033363 CDS YKL204W 11 53705 55603 W 2004-02-13 1996-07-31
S000118401 ARS ARS1103 ARSXI-56 chromosome 11 11 55672 55918 2006-08-30 2006-08-30 Autonomously Replicating Sequence
S000001686 ORF Verified YKL203C TOR2 DRR2 chromosome 11 L000002323 11 63360 55936 C -152.3 2004-02-13 2004-02-13|1996-07-31 PIK-related protein kinase and rapamycin target; subunit of TORC1, a complex that regulates growth in response to nutrients and TORC2, a complex that regulates cell-cycle dependent polarization of the actin cytoskeleton; involved in meiosis
S000033266 CDS YKL203C 11 63360 55936 C 2004-02-13 2004-02-13|1996-07-31
S000001685 ORF Dubious YKL202W chromosome 11 11 63822 64403 W 2004-02-13 2001-05-31|1996-07-31|1998-11-10 Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000033230 CDS YKL202W 11 63822 64403 W 2004-02-13 2001-05-31|1996-07-31|1998-11-10
S000001684 ORF Verified YKL201C MNN4 YKL200C chromosome 11 L000001128 11 67467 63931 C -132.6 2004-02-13 2001-05-31|1996-07-31|1998-11-10 Putative positive regulator of mannosylphosphate transferase (Mnn6p), involved in mannosylphosphorylation of N-linked oligosaccharides; expression increases in late-logarithmic and stationary growth phases
S000032315 CDS YKL201C 11 67467 63931 C 2004-02-13 2001-05-31|1996-07-31|1998-11-10
S000001681 ORF Verified YKL198C PTK1 POT1|YKT9|YKL199C|STK1|KKT8 chromosome 11 L000003491 11 70223 68274 C 2004-02-13 2003-01-08|1996-07-31|1998-11-10 Putative serine/threonine protein kinase that regulates spermine uptake; involved in polyamine transport; possible mitochondrial protein
S000034854 CDS YKL198C 11 70223 68274 C 2004-02-13 2003-01-08|1996-07-31|1998-11-10
S000001680 ORF Verified YKL197C PEX1 PAS1 chromosome 11 L000001337 11 73870 70739 C 2004-02-13 1996-07-31 AAA-peroxin that heterodimerizes with AAA-peroxin Pex6p and participates in the recycling of peroxisomal signal receptor Pex5p from the peroxisomal membrane to the cystosol; induced by oleic acid and upregulated during anaerobiosis
S000033983 CDS YKL197C 11 73870 70739 C 2004-02-13 1996-07-31
S000007055 long_terminal_repeat YKLWdelta1 chromosome 11 11 74241 74523 W 2004-02-13 2000-05-19 Ty1 LTR
S000006671 tRNA tN(GUU)K chromosome 11 L000003629 11 74629 74702 W 2004-02-13 2000-05-19 tRNA-Asn
S000030740 noncoding_exon tN(GUU)K 11 74629 74702 W 2004-02-13 2000-05-19
S000001679 ORF Verified YKL196C YKT6 chromosome 11 L000004163 11 75539 74937 C 2004-02-13 1996-07-31 Vesicle membrane protein (v-SNARE) with acyltransferase activity; involved in trafficking to and within the Golgi, endocytic trafficking to the vacuole, and vacuolar fusion; membrane localization due to prenylation at the carboxy-terminus
S000033862 CDS YKL196C 11 75539 74937 C 2004-02-13 1996-07-31
S000001678 ORF Verified YKL195W MIA40 TIM40|FMP15 chromosome 11 11 75826 77037 W 2004-02-13 2003-09-22|1996-07-31 Essential protein of the mitochondrial intermembrane space (IMS); promotes retention of newly imported proteins; may do so by stabilizing client protein folding as part of a disulfide relay system or transferring metal to client proteins
S000033827 CDS YKL195W 11 75826 77037 W 2004-02-13 2003-09-22|1996-07-31
S000001677 ORF Verified YKL194C MST1 chromosome 11 L000001207 11 78651 77263 C 2004-02-13 1996-07-31 Mitochondrial threonyl-tRNA synthetase
S000030386 CDS YKL194C 11 78651 77263 C 2004-02-13 1996-07-31
S000001676 ORF Verified YKL193C SDS22 EGP1 chromosome 11 L000002590 11 79887 78871 C 2004-02-13 1996-07-31 Conserved nuclear regulatory subunit of Glc7p type 1 protein serine-threonine phosphatase (PP1), functions positively with Glc7p to promote dephosphorylation of nuclear substrates required for chromosome transmission during mitosis
S000030304 CDS YKL193C 11 79887 78871 C 2004-02-13 1996-07-31
S000001675 ORF Verified YKL192C ACP1 chromosome 11 L000004843 11 80542 80165 C 2004-02-13 1996-07-31 Mitochondrial matrix acyl carrier protein, involved in biosynthesis of octanoate, which is a precursor to lipoic acid; activated by phosphopantetheinylation catalyzed by Ppt2p
S000030104 CDS YKL192C 11 80542 80165 C 2004-02-13 1996-07-31
S000001674 ORF Verified YKL191W DPH2 chromosome 11 L000000522 11 81040 82644 W 2004-02-13 1996-07-31 Protein required, along with Dph1p, Kti11p, Jjj3p, and Dph5p, for synthesis of diphthamide, which is a modified histidine residue of translation elongation factor 2 (Eft1p or Eft2p); may act in a complex with Dph1p and Kti11p
S000030067 CDS YKL191W 11 81040 82644 W 2004-02-13 1996-07-31
S000001673 ORF Verified YKL190W CNB1 YCN2|CRV1 chromosome 11 L000000371 11 82952 83555 W 2004-02-13 1996-07-31 Calcineurin B; the regulatory subunit of calcineurin, a Ca++/calmodulin-regulated type 2B protein phosphatase which regulates Crz1p (a stress-response transcription factor), the other calcineurin subunit is encoded by CNA1 and/or CMP1
S000029989 CDS YKL190W 11 82952 83003 W 2004-02-13 1996-07-31
S000029990 CDS YKL190W 11 83080 83555 W 2004-02-13 1996-07-31
S000029991 intron YKL190W 11 83004 83079 W 2004-02-13 1996-07-31
S000007050 long_terminal_repeat YKLCdelta2 chromosome 11 11 84120 83813 C 2004-02-13 2000-05-19 Ty1 LTR
S000006651 tRNA tL(UAA)K chromosome 11 L000003630 11 84213 84296 W 2004-02-13 2000-05-19 tRNA-Leu
S000037408 noncoding_exon tL(UAA)K 11 84213 84296 W 2004-02-13 2000-05-19
S000001672 ORF Verified YKL189W HYM1 chromosome 11 L000004365 11 84709 85908 W 2004-02-13 1996-07-31 Component of the RAM signaling network that is involved in regulation of Ace2p activity and cellular morphogenesis, interacts with Kic1p and Sog2p, localizes to sites of polarized growth during budding and during the mating response
S000030561 CDS YKL189W 11 84709 85908 W 2004-02-13 1996-07-31
S000001671 ORF Verified YKL188C PXA2 PAT1 chromosome 11 L000003538 11 88791 86230 C 2004-02-13 1996-07-31 Subunit of a heterodimeric peroxisomal ATP-binding cassette transporter complex (Pxa1p-Pxa2p), required for import of long-chain fatty acids into peroxisomes; similarity to human adrenoleukodystrophy transporter and ALD-related proteins
S000030413 CDS YKL188C 11 88791 86230 C 2004-02-13 1996-07-31
S000130138 ARS ARS1104 ARSXI-89 chromosome 11 11 88794 89292 2009-05-06 2009-05-06 Putative replication origin, identified in multiple array studies, not yet confirmed by plasmid-based assay
S000001670 ORF Uncharacterized YKL187C chromosome 11 11 91541 89289 C 2004-02-13 1996-07-31 Putative protein of unknown function; the authentic, non-tagged protein is detected in a phosphorylated state in highly purified mitochondria in high-throughput studies
S000037608 CDS YKL187C 11 91541 89289 C 2004-02-13 1996-07-31
S000001669 ORF Verified YKL186C MTR2 chromosome 11 L000002934 11 93303 92749 C 2004-02-13 1996-07-31 mRNA transport regulator, essential nuclear protein; Mex67p and Mtr2p form a mRNA export complex which binds to RNA
S000037550 CDS YKL186C 11 93303 92749 C 2004-02-13 1996-07-31
S000122106 five_prime_UTR_intron YKL186C 11 93470 93317 C 2007-04-04 2007-04-04
S000001668 ORF Verified YKL185W ASH1 chromosome 11 L000003058 11 94504 96270 W 2004-02-13 1996-07-31 Zinc-finger inhibitor of HO transcription; mRNA is localized and translated in the distal tip of anaphase cells, resulting in accumulation of Ash1p in daughter cell nuclei and inhibition of HO expression; potential Cdc28p substrate
S000037492 CDS YKL185W 11 94504 96270 W 2004-02-13 1996-07-31
S000001667 ORF Verified YKL184W SPE1 SPE10|ORD1 chromosome 11 L000001307|L000001993|L000001995 11 96762 98162 W -130.3 2004-02-13 1996-07-31 Ornithine decarboxylase, catalyzes the first step in polyamine biosynthesis; degraded in a proteasome-dependent manner in the presence of excess polyamines; deletion decreases lifespan, and increases necrotic cell death and ROS generation
S000032037 CDS YKL184W 11 96762 98162 W 2004-02-13 1996-07-31
S000119035 ARS ARS1125 ARSXI-98|ARS1104.5 chromosome 11 11 98334 98572 2006-10-03 2006-10-03 Autonomously Replicating Sequence
S000028558 ORF Uncharacterized YKL183C-A chromosome 11 11 98612 98400 C 2004-02-13 2003-07-29 Putative protein of unknown function; identified by fungal homology and RT-PCR
S000031244 CDS YKL183C-A 11 98612 98400 C 2004-02-13 2003-07-29
S000001666 ORF Verified YKL183W LOT5 chromosome 11 11 98726 99646 W 2004-02-13 1996-07-31 Protein of unknown function; gene expression increases in cultures shifted to a lower temperature
S000031917 CDS YKL183W 11 98726 99646 W 2004-02-13 1996-07-31
S000001665 ORF Verified YKL182W FAS1 chromosome 11 L000000601 11 100676 106831 W -116.7 2004-02-13 1996-07-31 Beta subunit of fatty acid synthetase, which catalyzes the synthesis of long-chain saturated fatty acids; contains acetyltransacylase, dehydratase, enoyl reductase, malonyl transacylase, and palmitoyl transacylase activities
S000031771 CDS YKL182W 11 100676 106831 W 2004-02-13 1996-07-31
S000001664 ORF Verified YKL181W PRS1 PRP1 chromosome 11 L000001494 11 107321 108604 W 2004-02-13 1996-07-31 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, synthesizes PRPP, which is required for nucleotide, histidine, and tryptophan biosynthesis; one of five related enzymes, which are active as heteromultimeric complexes
S000029853 CDS YKL181W 11 107321 108604 W 2004-02-13 1996-07-31
S000001663 ORF Verified YKL180W RPL17A RPL17 chromosome 11 L000001715 11 109274 110134 W 2004-02-13 1996-07-31 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl17Bp and has similarity to E. coli L22 and rat L17 ribosomal proteins; copurifies with the Dam1 complex (aka DASH complex)
S000036148 CDS YKL180W 11 109274 109582 W 2004-02-13 1996-07-31
S000036149 CDS YKL180W 11 109889 110134 W 2004-02-13 1996-07-31
S000036150 intron YKL180W 11 109583 109888 W 2004-02-13 1996-07-31
S000001662 ORF Verified YKL179C COY1 chromosome 11 11 112508 110469 C 2004-02-13 1996-07-31 Golgi membrane protein with similarity to mammalian CASP; genetic interactions with GOS1 (encoding a Golgi snare protein) suggest a role in Golgi function
S000035207 CDS YKL179C 11 112508 110469 C 2004-02-13 1996-07-31
S000001660 ORF Dubious YKL177W chromosome 11 11 114361 114699 W 2004-02-13 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene STE3
S000034192 CDS YKL177W 11 114361 114699 W 2004-02-13 1996-07-31
S000001661 ORF Verified YKL178C STE3 DAF2 chromosome 11 L000002113 11 114632 113220 C 2004-02-13 1996-07-31 Receptor for a factor pheromone, transcribed in alpha cells and required for mating by alpha cells, couples to MAP kinase cascade to mediate pheromone response; ligand bound receptors are endocytosed and recycled to the plasma membrane; GPC
S000035096 CDS YKL178C 11 114632 113220 C 2004-02-13 1996-07-31
S000001659 ORF Verified YKL176C LST4 chromosome 11 L000004354 11 117991 115505 C 2004-02-13 1996-07-31 Protein possibly involved in a post-Golgi secretory pathway; required for the transport of nitrogen-regulated amino acid permease Gap1p from the Golgi to the cell surface
S000034038 CDS YKL176C 11 117991 115505 C 2004-02-13 1996-07-31
S000001658 ORF Verified YKL175W ZRT3 chromosome 11 11 118798 120309 W 2004-02-13 1996-07-31 Vacuolar membrane zinc transporter, transports zinc from storage in the vacuole to the cytoplasm when needed; transcription is induced under conditions of zinc deficiency
S000033999 CDS YKL175W 11 118798 120309 W 2004-02-13 1996-07-31
S000001657 ORF Verified YKL174C TPO5 chromosome 11 11 122241 120385 C 2004-02-13 1996-07-31 Protein involved in excretion of putrescine and spermidine; putative polyamine transporter in the Golgi or post-Golgi vesicles
S000033149 CDS YKL174C 11 122241 120385 C 2004-02-13 1996-07-31
S000001656 ORF Verified YKL173W SNU114 GIN10 chromosome 11 L000003541 11 122522 125548 W 2004-02-13 1996-07-31 GTPase component of U5 snRNP involved in mRNA splicing via spliceosome; binds directly to U5 snRNA; proposed to be involved in conformational changes of the spliceosome; similarity to ribosomal translocation factor EF-2
S000033113 CDS YKL173W 11 122522 125548 W 2004-02-13 1996-07-31
S000001655 ORF Verified YKL172W EBP2 chromosome 11 L000004646 11 125764 127047 W 2004-02-13 1996-07-31 Essential protein required for the maturation of 25S rRNA and 60S ribosomal subunit assembly, localizes to the nucleolus; constituent of 66S pre-ribosomal particles
S000033024 CDS YKL172W 11 125764 127047 W 2004-02-13 1996-07-31
S000001654 ORF Uncharacterized YKL171W chromosome 11 11 127480 130266 W 2004-02-13 1996-07-31 Putative protein kinase; implicated in proteasome function; epitope-tagged protein localizes to the cytoplasm
S000032097 CDS YKL171W 11 127480 130266 W 2004-02-13 1996-07-31
S000001653 ORF Verified YKL170W MRPL38 MRPL34 chromosome 11 S000029310|L000002693|L000001173 11 130639 131055 W 2004-02-13 1996-07-31 Mitochondrial ribosomal protein of the large subunit; appears as two protein spots (YmL34 and YmL38) on two-dimensional SDS gels
S000031979 CDS YKL170W 11 130639 131055 W 2004-02-13 1996-07-31
S000001652 ORF Dubious YKL169C chromosome 11 11 131073 130690 C 2004-02-13 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene MRPL38
S000030884 CDS YKL169C 11 131073 130690 C 2004-02-13 1996-07-31
S000001651 ORF Verified YKL168C KKQ8 chromosome 11 L000004097 11 133467 131293 C 2006-05-08 1996-07-31|2006-05-08 Putative serine/threonine protein kinase with unknown cellular role
S000030812 CDS YKL168C 11 133467 131293 C 2006-05-08 1996-07-31|2006-05-08
S000001650 ORF Verified YKL167C MRP49 chromosome 11 L000001159 11 134139 133726 C 2004-02-13 1996-07-31 Mitochondrial ribosomal protein of the large subunit, not essential for mitochondrial translation
S000037870 CDS YKL167C 11 134139 133726 C 2004-02-13 1996-07-31
S000001649 ORF Verified YKL166C TPK3 chromosome 11 L000002327 11 135710 134514 C 2004-02-13 1996-07-31 cAMP-dependent protein kinase catalytic subunit; promotes vegetative growth in response to nutrients via the Ras-cAMP signaling pathway; partially redundant with Tpk1p and Tpk2p; localizes to P-bodies during stationary phase
S000037767 CDS YKL166C 11 135710 134514 C 2004-02-13 1996-07-31
S000007617 ORF Dubious YKL165C-A chromosome 11 11 136028 135795 C 2004-02-13 2001-02-26 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000037215 CDS YKL165C-A 11 136028 135795 C 2004-02-13 2001-02-26
S000001648 ORF Verified YKL165C MCD4 FSR2|SSU21|ZRG16 chromosome 11 L000003913 11 140696 137937 C 2004-02-13 1996-07-31 Protein involved in glycosylphosphatidylinositol (GPI) anchor synthesis; multimembrane-spanning protein that localizes to the endoplasmic reticulum; highly conserved among eukaryotes
S000037706 CDS YKL165C 11 140696 137937 C 2004-02-13 1996-07-31
S000006558 tRNA tE(UUC)K chromosome 11 L000003643 11 141094 141023 C 2004-02-13 2000-05-19 tRNA-Glu; thiolation of uridine at wobble position (34) requires Ncs6p
S000036005 noncoding_exon tE(UUC)K 11 141094 141023 C 2004-02-13 2000-05-19
S000001647 ORF Verified YKL164C PIR1 CCW6 chromosome 11 L000001441 11 142824 141799 C 2004-02-13 1996-07-31 O-glycosylated protein required for cell wall stability; attached to the cell wall via beta-1,3-glucan; mediates mitochondrial translocation of Apn1p; expression regulated by the cell integrity pathway and by Swi5p during the cell cycle
S000036944 CDS YKL164C 11 142824 141799 C 2004-02-13 1996-07-31
S000001646 ORF Verified YKL163W PIR3 CCW8 chromosome 11 L000001443 11 144406 145383 W 2004-02-13 1996-07-31 O-glycosylated covalently-bound cell wall protein required for cell wall stability; expression is cell cycle regulated, peaking in M/G1 and also subject to regulation by the cell integrity pathway
S000036912 CDS YKL163W 11 144406 145383 W 2004-02-13 1996-07-31
S000007244 ORF Dubious YKL162C-A chromosome 11 11 146079 145927 C 2004-02-13 1999-07-17 Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000032863 CDS YKL162C-A 11 146079 145927 C 2004-02-13 1999-07-17
S000001645 ORF Uncharacterized YKL162C chromosome 11 11 148843 147635 C 2004-02-13 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion
S000036809 CDS YKL162C 11 148843 147635 C 2004-02-13 1996-07-31
S000001644 ORF Verified YKL161C MLP1 chromosome 11 11 150692 149391 C 2004-02-13 1996-07-31 Protein kinase implicated in the Slt2p mitogen-activated (MAP) kinase signaling pathway; associates with Rlm1p
S000035941 CDS YKL161C 11 150692 149391 C 2004-02-13 1996-07-31
S000118402 ARS ARS1106 ARSXI-153 chromosome 11 11 152939 153177 2006-08-30 2006-08-30 Autonomously Replicating Sequence
S000001643 ORF Verified YKL160W ELF1 chromosome 11 11 153274 153711 W 2004-02-13 1996-07-31 Transcription elongation factor that contains a conserved zinc finger domain; implicated in the maintenance of proper chromatin structure in actively transcribed regions; deletion inhibits Brome mosaic virus (BMV) gene expression
S000035865 CDS YKL160W 11 153274 153711 W 2004-02-13 1996-07-31
S000001642 ORF Verified YKL159C RCN1 chromosome 11 S000007456 11 154456 153821 C 2004-02-13 1996-07-31 Protein involved in calcineurin regulation during calcium signaling; has similarity to H. sapiens DSCR1 which is found in the Down Syndrome candidate region
S000034776 CDS YKL159C 11 154456 153821 C 2004-02-13 1996-07-31
S000001640 ORF Verified YKL157W APE2 YKL158W|LAP1 chromosome 11 S000001641|L000000092 11 154996 158186 W -124.8 2004-02-13 2000-07-14|1996-07-31 Aminopeptidase yscII; may have a role in obtaining leucine from dipeptide substrates; sequence coordinates have changed since RT-PCR analysis showed that the adjacent ORF YKL158W comprises the 5' exon of APE2/YKL157W
S000033809 CDS YKL157W 11 154996 155276 W 2004-02-13 2000-07-14|1996-07-31
S000033810 CDS YKL157W 11 155660 158186 W 2004-02-13 2000-07-14
S000033811 intron YKL157W 11 155277 155659 W 2004-02-13 2000-07-14
S000001639 ORF Verified YKL156W RPS27A chromosome 11 L000002712 11 158619 159217 W 2004-02-13 1996-07-31 Protein component of the small (40S) ribosomal subunit; nearly identical to Rps27Bp and has similarity to rat S27 ribosomal protein
S000033664 CDS YKL156W 11 158619 158621 W 2004-02-13 1996-07-31
S000033665 CDS YKL156W 11 158972 159217 W 2004-02-13 1996-07-31
S000033666 intron YKL156W 11 158622 158971 W 2004-02-13 1996-07-31
S000028668 ORF Dubious YKL156C-A chromosome 11 11 159096 158980 C 2004-02-13 2003-07-29 Dubious open reading frame unlikely to encode a protein; completely overlaps the verified gene RPS27A; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching
S000032493 CDS YKL156C-A 11 159096 158980 C 2004-02-13 2003-07-29
S000001638 ORF Verified YKL155C RSM22 chromosome 11 11 161347 159461 C 2004-02-13 1996-07-31 Mitochondrial ribosomal protein of the small subunit; also predicted to be an S-adenosylmethionine-dependent methyltransferase
S000033531 CDS YKL155C 11 161347 159461 C 2004-02-13 1996-07-31
S000001637 ORF Verified YKL154W SRP102 chromosome 11 11 161606 162340 W 2004-02-13 1996-07-31 Signal recognition particle (SRP) receptor beta subunit; involved in SRP-dependent protein targeting; anchors Srp101p to the ER membrane
S000033491 CDS YKL154W 11 161606 162340 W 2004-02-13 1996-07-31
S000006716 tRNA tR(UCU)K chromosome 11 L000003642 11 162563 162492 C 2004-02-13 2000-05-19 tRNA-Arg (Arg3), one of 11 nuclear tRNA genes containing the tDNA-anticodon UCU (converted to mcm5-UCU in the mature tRNA), decodes AGA codons into arginine, one of 19 nuclear tRNAs for arginine
S000037862 noncoding_exon tR(UCU)K 11 162563 162492 C 2004-02-13 2000-05-19
S000007056 long_terminal_repeat YKLWdelta3 chromosome 11 11 162836 163174 W 2004-02-13 2000-05-19 Ty1 LTR
S000001636 ORF Dubious YKL153W chromosome 11 11 163605 164114 W 2004-02-13 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; transcription of both YLK153W and the overlapping essential gene GPM1 is reduced in the gcr1 null mutant
S000032752 CDS YKL153W 11 163605 164114 W 2004-02-13 1996-07-31
S000001635 ORF Verified YKL152C GPM1 chromosome 11 L000000726 11 164390 163647 C 2004-02-13 1996-07-31 Tetrameric phosphoglycerate mutase, mediates the conversion of 3-phosphoglycerate to 2-phosphoglycerate during glycolysis and the reverse reaction during gluconeogenesis
S000032605 CDS YKL152C 11 164390 163647 C 2004-02-13 1996-07-31
S000001634 ORF Uncharacterized YKL151C chromosome 11 11 165935 164922 C 2004-02-13 1996-07-31 Putative protein of unknown function; YKL151C promoter contains STREs (stress response elements) and expression is induced by heat shock or methyl methanesulfonate; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm
S000031623 CDS YKL151C 11 165935 164922 C 2004-02-13 1996-07-31
S000001633 ORF Verified YKL150W MCR1 chromosome 11 L000003134 11 166549 167457 W 2004-02-13 1996-07-31 Mitochondrial NADH-cytochrome b5 reductase, involved in ergosterol biosynthesis
S000031554 CDS YKL150W 11 166549 167457 W 2004-02-13 1996-07-31
S000122105 five_prime_UTR_intron YKL150W 11 166405 166492 W 2007-04-04 2007-04-04
S000001632 ORF Verified YKL149C DBR1 PRP26 chromosome 11 L000000495 11 168834 167617 C -106.4 2004-02-13 1996-07-31 RNA lariat debranching enzyme, involved in intron turnover; required for efficient Ty1 transposition
S000031536 CDS YKL149C 11 168834 167617 C 2004-02-13 1996-07-31
S000001631 ORF Verified YKL148C SDH1 SDHA chromosome 11 L000001823 11 171134 169212 C 2004-02-13 1996-07-31 Flavoprotein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p), which couples the oxidation of succinate to the transfer of electrons to ubiquinone
S000030671 CDS YKL148C 11 171134 169212 C 2004-02-13 1996-07-31
S000001629 ORF Verified YKL146W AVT3 chromosome 11 11 171788 173866 W 2004-02-13 1996-07-31 Vacuolar transporter, exports large neutral amino acids from the vacuole; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters
S000030513 CDS YKL146W 11 171788 173866 W 2004-02-13 1996-07-31
S000001630 ORF Dubious YKL147C chromosome 11 11 172173 171556 C 2004-02-13 1996-07-31 Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; partially overlaps the verified gene AVT3
S000030585 CDS YKL147C 11 172173 171556 C 2004-02-13 1996-07-31
S000001628 ORF Verified YKL145W RPT1 YTA3|CIM5 chromosome 11 L000002557 11 174218 175621 W 2004-02-13 1996-07-31 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; required for optimal CDC20 transcription; interacts with Rpn12p and the E3 ubiquitin-protein ligase Ubr1p
S000030368 CDS YKL145W 11 174218 175621 W 2004-02-13 1996-07-31
S000028841 ORF Dubious YKL145W-A chromosome 11 11 174963 175055 W 2004-02-13 2003-07-29 Dubious open reading frame, unlikely to encode a protein; completely overlaps the verified essential gene RPT1; identified by expression profiling and mass spectrometry
S000034526 CDS YKL145W-A 11 174963 175055 W 2004-02-13 2003-07-29
S000001627 ORF Verified YKL144C RPC25 YKL1 chromosome 11 L000002427 11 176486 175848 C 2004-02-13 1996-07-31 RNA polymerase III subunit C25, required for transcription initiation; forms a heterodimer with Rpc17p; paralog of Rpb7p
S000037515 CDS YKL144C 11 176486 175848 C 2004-02-13 1996-07-31
S000001626 ORF Verified YKL143W LTV1 YKL2 chromosome 11 L000000962 11 176786 178177 W 2004-02-13 1996-07-31 Component of the GSE complex, which is required for proper sorting of amino acid permease Gap1p; required for ribosomal small subunit export from nucleus; required for growth at low temperature
S000037465 CDS YKL143W 11 176786 178177 W 2004-02-13 1996-07-31
S000001625 ORF Verified YKL142W MRP8 YKL3 chromosome 11 L000001156 11 178520 179179 W 2004-02-13 1996-07-31 Protein of unknown function; undergoes sumoylation; transcription induced under cell wall stress; protein levels are reduced under anaerobic conditions; originally thought to be a mitochondrial ribosomal protein based on sequence analysis
S000036742 CDS YKL142W 11 178520 179179 W 2004-02-13 1996-07-31
S000001624 ORF Verified YKL141W SDH3 YKL4|CYB3 chromosome 11 L000001825 11 179672 180268 W 2004-02-13 1996-07-31 Cytochrome b subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p), which couples the oxidation of succinate to the transfer of electrons to ubiquinone
S000036643 CDS YKL141W 11 179672 180268 W 2004-02-13 1996-07-31
S000001623 ORF Verified YKL140W TGL1 YKL5 chromosome 11 L000002293 11 180784 182430 W 2004-02-13 1996-07-31 Steryl ester hydrolase, one of three gene products (Yeh1p, Yeh2p, Tgl1p) responsible for steryl ester hydrolase activity and involved in sterol homeostasis; localized to lipid particle membranes
S000036522 CDS YKL140W 11 180784 182430 W 2004-02-13 1996-07-31
S000001622 ORF Verified YKL139W CTK1 chromosome 11 L000000432 11 182963 184549 W 2004-02-13 1996-07-31 Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), which phosphorylates both RNA pol II subunit Rpo21p to affect transcription and pre-mRNA 3' end processing, and ribosomal protein Rps2p to increase translational fidelity
S000036668 CDS YKL139W 11 182963 184549 W 2004-02-13 1996-07-31
S000028421 ORF Verified YKL138C-A HSK3 chromosome 11 S000028418 11 185017 184808 C 2004-02-13 2002-06-20 Essential subunit of the Dam1 complex (aka DASH complex), couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; is transferred to the kinetochore prior to mitosis
S000029957 CDS YKL138C-A 11 185017 184808 C 2004-02-13 2002-06-20
S000001621 ORF Verified YKL138C MRPL31 chromosome 11 L000001168|L000002529 11 185686 185291 C 2004-02-13 1996-07-31 Mitochondrial ribosomal protein of the large subunit
S000035696 CDS YKL138C 11 185686 185291 C 2004-02-13 1996-07-31
S000001620 ORF Verified YKL137W CMC1 chromosome 11 11 185962 186297 W 2005-12-15 1996-07-31|2005-12-15 Evolutionarily conserved copper-binding protein of the mitochondrial intermembrane space, may be involved in delivering copper from the matrix to the cytochrome c oxidase complex; contains a twin CX9C motif
S000035632 CDS YKL137W 11 185962 186297 W 2005-12-15 1996-07-31|2005-12-15
S000001619 ORF Dubious YKL136W chromosome 11 11 186421 186819 W 2005-12-15 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF APL2/YKL135C
S000035555 CDS YKL136W 11 186421 186819 W 2005-12-15 1996-07-31
S000001618 ORF Verified YKL135C APL2 chromosome 11 L000000094 11 188645 186465 C 2005-12-15 1996-07-31 Beta-adaptin, large subunit of the clathrin-associated protein (AP-1) complex; binds clathrin; involved in clathrin-dependent Golgi protein sorting
S000034478 CDS YKL135C 11 188645 186465 C 2005-12-15 1996-07-31
S000001617 ORF Verified YKL134C OCT1 chromosome 11 L000004860 11 191441 189129 C 2005-12-15 1996-07-31 Mitochondrial intermediate peptidase, cleaves N-terminal residues of a subset of proteins upon import, after their cleavage by mitochondrial processing peptidase (Mas1p-Mas2p); may contribute to mitochondrial iron homeostasis
S000034401 CDS YKL134C 11 191441 189129 C 2005-12-15 1996-07-31
S000001616 ORF Uncharacterized YKL133C chromosome 11 11 193069 191678 C 2005-12-15 1996-07-31 Putative protein of unknown function; has similarity to Mgr3p, but unlike MGR3, is not required for growth of cells lacking the mitochondrial genome (null mutation does not confer a petite-negative phenotype)
S000034300 CDS YKL133C 11 193069 191678 C 2005-12-15 1996-07-31
S000001614 ORF Dubious YKL131W chromosome 11 11 194477 194998 W 2005-12-15 1996-07-31 Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000033359 CDS YKL131W 11 194477 194998 W 2005-12-15 1996-07-31
S000001615 ORF Verified YKL132C RMA1 chromosome 11 11 194865 193573 C 2005-12-15 1996-07-31 Putative dihydrofolate synthetase; has similarity to Fol3p and to E. coli folylpolyglutamate synthetase/dihydrofolate synthetase; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
S000033390 CDS YKL132C 11 194865 193573 C 2005-12-15 1996-07-31
S000001613 ORF Verified YKL130C SHE2 chromosome 11 L000004571 11 196027 195287 C 2005-12-15 1996-07-31 RNA-binding protein that binds specific mRNAs and interacts with She3p; part of the mRNA localization machinery that restricts accumulation of certain proteins to the bud
S000033257 CDS YKL130C 11 196027 195287 C 2005-12-15 1996-07-31
S000119036 ARS ARS1126 ARSXI-196|ARS1106.3 chromosome 11 11 196041 196286 2006-10-03 2006-10-03 Autonomously Replicating Sequence
S000001612 ORF Verified YKL129C MYO3 chromosome 11 L000002889 11 200163 196348 C 2005-12-15 1996-07-31 One of two type I myosins; localizes to actin cortical patches; deletion of MYO3 has little effect on growth, but myo3 myo5 double deletion causes severe defects in growth and actin cytoskeleton organization
S000032500 CDS YKL129C 11 200163 196348 C 2005-12-15 1996-07-31
S000001611 ORF Verified YKL128C PMU1 chromosome 11 L000003276 11 201415 200528 C 2005-12-15 1996-07-31 Putative phosphomutase, contains a region homologous to the active site of phosphomutases; overexpression suppresses the histidine auxotrophy of an ade3 ade16 ade17 triple mutant and the temperature sensitivity of a tps2 mutant
S000032407 CDS YKL128C 11 201415 200528 C 2005-12-15 1996-07-31
S000007054 long_terminal_repeat YKLCsigma1 chromosome 11 11 202627 202288 C 2005-12-15 2000-05-19 Ty3 LTR
S000006626 tRNA tK(CUU)K chromosome 11 L000003631 11 202643 202715 W 2005-12-15 2000-05-19 tRNA-Lys; a small portion is imported into mitochondria via interaction with mt lysyl-tRNA synthetase Msk1p and is necessary to decode AAG codons at high temperature, when base modification of mt-encoded tRNA-Lys is reduced
S000036035 noncoding_exon tK(CUU)K 11 202643 202715 W 2005-12-15 2000-05-19
S000001610 ORF Verified YKL127W PGM1 chromosome 11 L000001412 11 203185 204897 W -108.4 2005-12-15 1996-07-31 Phosphoglucomutase, minor isoform; catalyzes the conversion from glucose-1-phosphate to glucose-6-phosphate, which is a key step in hexose metabolism
S000032331 CDS YKL127W 11 203185 204897 W 2005-12-15 1996-07-31
S000001609 ORF Verified YKL126W YPK1 SLI2 chromosome 11 L000002541 11 205351 207393 W -97.7 2005-12-15 1996-07-31 Serine/threonine protein kinase required for receptor-mediated endocytosis; involved in sphingolipid-mediated and cell integrity signaling pathways; localized to the bud neck, cytosol and plasma membrane; homolog of mammalian kinase SGK
S000031322 CDS YKL126W 11 205351 207393 W 2005-12-15 1996-07-31
S000001608 ORF Verified YKL125W RRN3 chromosome 11 L000003362 11 207891 209774 W 2005-12-15 1996-07-31 Protein required for transcription of rDNA by RNA polymerase I; transcription factor independent of DNA template; involved in recruitment of RNA polymerase I to rDNA
S000031219 CDS YKL125W 11 207891 209774 W 2005-12-15 1996-07-31
S000001607 ORF Verified YKL124W SSH4 MLF4 chromosome 11 L000002951 11 210237 211976 W 2005-12-15 1996-07-31 Specificity factor required for Rsp5p-dependent ubiquitination and sorting of cargo proteins at the multivesicular body; identified as a high-copy suppressor of a SHR3 deletion, increasing steady-state levels of amino acid permeases
S000031112 CDS YKL124W 11 210237 211976 W 2005-12-15 1996-07-31
S000001606 ORF Dubious YKL123W chromosome 11 11 211687 212067 W 2005-12-15 1996-07-31 Dubious open reading frame, unlikely to encode a protein; partially overlaps the verified gene SSH4
S000030083 CDS YKL123W 11 211687 212067 W 2005-12-15 1996-07-31
S000001605 ORF Verified YKL122C SRP21 chromosome 11 L000002062 11 212642 212139 C 2005-12-15 1996-07-31 Subunit of the signal recognition particle (SRP), which functions in protein targeting to the endoplasmic reticulum membrane; not found in mammalian SRP; forms a pre-SRP structure in the nucleolus that is translocated to the cytoplasm
S000029913 CDS YKL122C 11 212642 212139 C 2005-12-15 1996-07-31
S000119037 ARS ARS1127 ARSXI-213|ARS1106.7 chromosome 11 11 213083 213387 2006-10-03 2006-10-03 Autonomously Replicating Sequence
S000001604 ORF Uncharacterized YKL121W DGR2 chromosome 11 11 213786 216344 W 2005-12-15 1996-07-31 Protein of unknown function; null mutant is resistant to 2-deoxy-D-glucose and displays abnormally elongated buds
S000029872 CDS YKL121W 11 213786 216344 W 2005-12-15 1996-07-31
S000001603 ORF Verified YKL120W OAC1 chromosome 11 S000007413 11 216988 217962 W 2005-12-15 1996-07-31 Mitochondrial inner membrane transporter, transports oxaloacetate, sulfate, thiosulfate, and isopropylmalate; member of the mitochondrial carrier family
S000037208 CDS YKL120W 11 216988 217962 W 2005-12-15 1996-07-31
S000001601 ORF Dubious YKL118W chromosome 11 11 218770 219081 W 2005-12-15 1996-07-31 Dubious open reading frame, unlikely to encode a protein; partially overlaps the verified gene VPH2
S000036185 CDS YKL118W 11 218770 219081 W 2005-12-15 1996-07-31
S000001602 ORF Verified YKL119C VPH2 VMA12|CLS10 chromosome 11 L000002468 11 218861 218214 C 2005-12-15 1996-07-31 Integral membrane protein required for vacuolar H+-ATPase (V-ATPase) function, although not an actual component of the V-ATPase complex; functions in the assembly of the V-ATPase; localized to the endoplasmic reticulum (ER)
S000036236 CDS YKL119C 11 218861 218214 C 2005-12-15 1996-07-31
S000007051 long_terminal_repeat YKLCdelta4 chromosome 11 11 219367 219039 C 2005-12-15 2000-05-19 Ty1 LTR
S000006515 tRNA tA(AGC)K1 chromosome 11 L000003632 11 219539 219611 W 2005-12-15 2000-05-19 tRNA-Ala (Ala1), one of 11 nuclear tRNA genes containing the tDNA-anticodon AGC (converted to IGC in the mature tRNA), decodes GCU and GCC codons into alanine, one of 16 nuclear tRNAs for alanine
S000036246 noncoding_exon tA(AGC)K1 11 219539 219611 W 2005-12-15 2000-05-19
S000001600 ORF Verified YKL117W SBA1 chromosome 11 L000004284 11 219968 220618 W 2005-12-15 1996-07-31 Co-chaperone that binds to and regulates Hsp90 family chaperones; important for pp60v-src activity in yeast; homologous to the mammalian p23 proteins and like p23 can regulate telomerase activity
S000035238 CDS YKL117W 11 219968 220618 W 2005-12-15 1996-07-31
S000001599 ORF Verified YKL116C PRR1 chromosome 11 11 222544 220988 C 2005-12-15 1996-07-31 Serine/threonine protein kinase that inhibits pheromone induced signalling downstream of MAPK, possibly at the level of the Ste12p transcription factor
S000034995 CDS YKL116C 11 222544 220988 C 2005-12-15 1996-07-31
S000001598 ORF Dubious YKL115C chromosome 11 11 222929 222537 C 2005-12-15 1996-07-31 Dubious open reading frame, unlikely to encode a protein; partially overlaps the verified gene PRR1
S000034081 CDS YKL115C 11 222929 222537 C 2005-12-15 1996-07-31
S000001597 ORF Verified YKL114C APN1 chromosome 11 L000000096 11 224099 222996 C 2005-12-15 1996-07-31 Major apurinic/apyrimidinic endonuclease, 3'-repair diesterase involved in repair of DNA damage by oxidation and alkylating agents; also functions as a 3'-5' exonuclease to repair 7,8-dihydro-8-oxodeoxyguanosine
S000033938 CDS YKL114C 11 224099 222996 C 2005-12-15 1996-07-31
S000001596 ORF Verified YKL113C RAD27 FEN1|RTH1|ERC11 chromosome 11 L000002742|L000000565 11 225519 224371 C 2005-12-15 1996-07-31 5' to 3' exonuclease, 5' flap endonuclease, required for Okazaki fragment processing and maturation as well as for long-patch base-excision repair; member of the S. pombe RAD2/FEN1 family
S000033801 CDS YKL113C 11 225519 224371 C 2005-12-15 1996-07-31
S000001595 ORF Verified YKL112W ABF1 SBF1|REB2|OBF1|BAF1 chromosome 11 L000000159 11 226214 228409 W 2005-12-15 1996-07-31 DNA binding protein with possible chromatin-reorganizing activity involved in transcriptional activation, gene silencing, and DNA replication and repair
S000033734 CDS YKL112W 11 226214 228409 W 2005-12-15 1996-07-31
S000001594 ORF Dubious YKL111C chromosome 11 11 228443 228108 C 2005-12-15 1996-07-31 Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; partially overlaps the verified essential gene ABF1
S000032984 CDS YKL111C 11 228443 228108 C 2005-12-15 1996-07-31
S000001593 ORF Verified YKL110C KTI12 TOT4 chromosome 11 L000000923 11 229524 228583 C 2005-12-15 1996-07-31 Protein that plays a role, with Elongator complex, in modification of wobble nucleosides in tRNA; involved in sensitivity to G1 arrest induced by zymocin; interacts with chromatin throughout the genome; also interacts with Cdc19p
S000032867 CDS YKL110C 11 229524 228583 C 2005-12-15 1996-07-31
S000001592 ORF Verified YKL109W HAP4 chromosome 11 L000000754 11 231871 233535 W 2005-12-15 1996-07-31 Subunit of the heme-activated, glucose-repressed Hap2p/3p/4p/5p CCAAT-binding complex, a transcriptional activator and global regulator of respiratory gene expression; provides the principal activation function of the complex
S000032773 CDS YKL109W 11 231871 233535 W 2005-12-15 1996-07-31
S000001591 ORF Verified YKL108W SLD2 DRC1 chromosome 11 L000004708 11 234070 235431 W 2005-12-15 1996-07-31 Protein required for DNA replication, phosphorylated in S phase by S-phase cyclin-dependent kinases (Cdks), phosphorylation is essential for DNA replication and for complex formation with Dpb11p; potential Cdc28p substrate
S000032698 CDS YKL108W 11 234070 235431 W 2005-12-15 1996-07-31
S000001590 ORF Uncharacterized YKL107W chromosome 11 11 235785 236714 W 2005-12-15 1996-07-31 Putative protein of unknown function; proposed to be a palmitoylated membrane protein
S000032626 CDS YKL107W 11 235785 236714 W 2005-12-15 1996-07-31
S000007616 ORF Uncharacterized YKL106C-A chromosome 11 11 236910 236791 C 2005-12-15 2001-02-26 Putative protein of unknown function; identified by homology to uncharacterized proteins in other fungi
S000037214 CDS YKL106C-A 11 236910 236791 C 2005-12-15 2001-02-26
S000001589 ORF Verified YKL106W AAT1 chromosome 11 L000000009 11 237180 238535 W 2005-12-15 1996-07-31 Mitochondrial aspartate aminotransferase, catalyzes the conversion of oxaloacetate to aspartate in aspartate and asparagine biosynthesis
S000031616 CDS YKL106W 11 237180 238535 W 2005-12-15 1996-07-31
S000001588 ORF Uncharacterized YKL105C chromosome 11 11 242227 238829 C 2005-12-15 1996-07-31 Putative protein of unknown function
S000031413 CDS YKL105C 11 242227 238829 C 2005-12-15 1996-07-31
S000001587 ORF Verified YKL104C GFA1 chromosome 11 L000000702 11 245017 242864 C 2005-12-15 1996-07-31 Glutamine-fructose-6-phosphate amidotransferase, catalyzes the formation of glucosamine-6-P and glutamate from fructose-6-P and glutamine in the first step of chitin biosynthesis
S000030506 CDS YKL104C 11 245017 242864 C 2005-12-15 1996-07-31
S000001586 ORF Verified YKL103C LAP4 API|YSC1|APE1 chromosome 11 L000000930 11 247326 245782 C -138 2005-12-15 1996-07-31 Vacuolar aminopeptidase yscI; zinc metalloproteinase that belongs to the peptidase family M18; often used as a marker protein in studies of autophagy and cytosol to vacuole targeting (CVT) pathway
S000030363 CDS YKL103C 11 247326 245782 C 2005-12-15 1996-07-31
S000001585 ORF Dubious YKL102C chromosome 11 11 248011 247706 C 2005-12-15 1996-07-31 Dubious open reading frame unlikely to encode a functional protein; deletion confers sensitivity to citric acid; predicted protein would include a thiol-disulfide oxidoreductase active site
S000030203 CDS YKL102C 11 248011 247706 C 2005-12-15 1996-07-31
S000001584 ORF Verified YKL101W HSL1 ELM2|NIK1 chromosome 11 L000003129|L000002839 11 248564 253120 W 2005-12-15 1996-07-31 Nim1p-related protein kinase that regulates the morphogenesis and septin checkpoints; associates with the assembled septin filament; required along with Hsl7p for bud neck recruitment, phosphorylation, and degradation of Swe1p
S000037537 CDS YKL101W 11 248564 253120 W 2005-12-15 1996-07-31
S000028840 ORF Dubious YKL100W-A chromosome 11 11 253803 253892 W 2005-12-15 2003-07-29 Putative protein of unknown function; identified by expression profiling and mass spectrometry
S000034525 CDS YKL100W-A 11 253803 253892 W 2005-12-15 2003-07-29
S000001583 ORF Uncharacterized YKL100C chromosome 11 11 255104 253341 C 2005-12-15 1996-07-31 Putative protein of unknown function with similarity to a human minor histocompatibility antigen and signal peptide peptidases; YKL100C is not an essential gene
S000037360 CDS YKL100C 11 255104 253341 C 2005-12-15 1996-07-31
S000001582 ORF Verified YKL099C UTP11 chromosome 11 11 256116 255364 C 2005-12-15 1996-07-31|2005-12-15 Subunit of U3-containing Small Subunit (SSU) processome complex involved in production of 18S rRNA and assembly of small ribosomal subunit
S000031999 CDS YKL099C 11 256116 255364 C 2005-12-15 1996-07-31|2005-12-15
S000001581 ORF Verified YKL098W MTC2 chromosome 11 11 256414 257487 W 2005-12-15 1996-07-31 Protein of unknown function; mtc2 is synthetically sick with cdc13-1
S000031070 CDS YKL098W 11 256414 257487 W 2005-12-15 1996-07-31
S000001580 ORF Dubious YKL097C chromosome 11 11 258557 258147 C 2005-12-15 1996-07-31 Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species
S000030940 CDS YKL097C 11 258557 258147 C 2005-12-15 1996-07-31
S000028667 ORF Uncharacterized YKL096C-B chromosome 11 11 258866 258717 C 2005-12-15 2003-07-29 Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching
S000032492 CDS YKL096C-B 11 258866 258717 C 2005-12-15 2003-07-29
S000001956 ORF Verified YKL096W-A CWP2 YKL097W-A|LPR1 chromosome 11 L000002857|L000000952 11 258897 259175 W 2005-12-15 1996-07-31 Covalently linked cell wall mannoprotein, major constituent of the cell wall; plays a role in stabilizing the cell wall; involved in low pH resistance; precursor is GPI-anchored
S000037786 CDS YKL096W-A 11 258897 259175 W 2005-12-15 1996-07-31
S000001579 ORF Verified YKL096W CWP1 YJU1 chromosome 11 L000000446|L000002512 11 260776 261495 W 2005-12-15 1996-07-31 Cell wall mannoprotein that localizes specifically to birth scars of daughter cells, linked to a beta-1,3- and beta-1,6-glucan heteropolymer through a phosphodiester bond; required for propionic acid resistance
S000030917 CDS YKL096W 11 260776 261495 W 2005-12-15 1996-07-31
S000001578 ORF Verified YKL095W YJU2 CWC16 chromosome 11 L000002513 11 261921 262757 W 2005-12-15 1996-07-31 Essential protein required for pre-mRNA splicing; associates transiently with the spliceosomal NTC ("nineteen complex") and acts after Prp2p to promote the first catalytic reaction of splicing
S000030823 CDS YKL095W 11 261921 262757 W 2005-12-15 1996-07-31
S000001577 ORF Verified YKL094W YJU3 chromosome 11 L000002514 11 262993 263934 W 2005-12-15 1996-07-31 Serine hydrolase with sequence similarity to monoglyceride lipase (MGL), localizes to lipid particles
S000037906 CDS YKL094W 11 262993 263934 W 2005-12-15 1996-07-31
S000001576 ORF Verified YKL093W MBR1 chromosome 11 L000001033 11 264433 265452 W 2005-12-15 1996-07-31 Protein involved in mitochondrial functions and stress response; overexpression suppresses growth defects of hap2, hap3, and hap4 mutants
S000037808 CDS YKL093W 11 264433 265452 W 2005-12-15 1996-07-31
S000001575 ORF Verified YKL092C BUD2 ERC25|CLA2 chromosome 11 L000000199 11 269103 265789 C 2005-12-15 1996-07-31 GTPase activating factor for Rsr1p/Bud1p required for both axial and bipolar budding patterns; mutants exhibit random budding in all cell types
S000037705 CDS YKL092C 11 269103 265789 C 2005-12-15 1996-07-31
S000001574 ORF Verified YKL091C SFH1 chromosome 11 11 270294 269362 C 2005-12-15 1996-07-31 Putative homolog of Sec14p, which is a phosphatidylinositol/phosphatidylcholine transfer protein involved in lipid metabolism; localizes to the nucleus
S000036936 CDS YKL091C 11 270294 269362 C 2005-12-15 1996-07-31
S000001573 ORF Verified YKL090W CUE2 chromosome 11 11 271522 272853 W 2005-12-15 1996-07-31 Protein of unknown function; has two CUE domains that bind ubiquitin, which may facilitate intramolecular monoubiquitination
S000036908 CDS YKL090W 11 271522 272853 W 2005-12-15 1996-07-31
S000001572 ORF Verified YKL089W MIF2 chromosome 11 L000001109 11 273038 274687 W -43 2005-12-15 1996-07-31 Kinetochore protein with homology to human CENP-C, required for structural integrity of the spindle during anaphase spindle elongation, interacts with histones H2A, H2B, and H4, phosphorylated by Ipl1p
S000036033 CDS YKL089W 11 273038 274687 W 2005-12-15 1996-07-31
S000001571 ORF Verified YKL088W CAB3 chromosome 11 11 274927 276642 W 2005-12-15 1996-07-31 Subunit of a phosphopantothenoylcysteine decarboxylase (PPCDC; Cab3p, Sis2p, Vhs3p) complex, which catalyzes the third step of coenzyme A biosynthesis; null mutant lethality is complemented by E. coli coaBC
S000035891 CDS YKL088W 11 274927 276642 W 2005-12-15 1996-07-31
S000001570 ORF Verified YKL087C CYT2 chromosome 11 L000000473 11 277507 276833 C 2005-12-15 1996-07-31 Cytochrome c1 heme lyase, involved in maturation of cytochrome c1, which is a subunit of the mitochondrial ubiquinol-cytochrome-c reductase; links heme covalently to apocytochrome c1
S000034890 CDS YKL087C 11 277507 276833 C 2005-12-15 1996-07-31
S000001569 ORF Verified YKL086W SRX1 chromosome 11 11 277925 278308 W 2005-12-15 1996-07-31 Sulfiredoxin, contributes to oxidative stress resistance by reducing cysteine-sulfinic acid groups in the peroxiredoxins Tsa1p and Ahp1p that are formed upon exposure to oxidants; conserved in higher eukaryotes
S000034838 CDS YKL086W 11 277925 278308 W 2005-12-15 1996-07-31
S000001568 ORF Verified YKL085W MDH1 chromosome 11 L000001045 11 278767 279771 W 2005-12-15 1996-07-31 Mitochondrial malate dehydrogenase, catalyzes interconversion of malate and oxaloacetate; involved in the tricarboxylic acid (TCA) cycle; phosphorylated
S000034670 CDS YKL085W 11 278767 279771 W 2005-12-15 1996-07-31
S000001567 ORF Verified YKL084W HOT13 chromosome 11 11 280153 280503 W 2005-12-15 1996-07-31 Mitochondrial intermembrane space protein, first component of a pathway mediating assembly of small TIM (Translocase of the Inner Membrane) complexes which escort hydrophobic inner membrane proteins en route to the TIM22 complex
S000033808 CDS YKL084W 11 280153 280503 W 2005-12-15 1996-07-31
S000001566 ORF Dubious YKL083W chromosome 11 11 280565 281179 W 2005-12-15 1996-07-31 Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; partially overlaps the verified essential gene RRP14
S000033660 CDS YKL083W 11 280565 281179 W 2005-12-15 1996-07-31
S000001565 ORF Verified YKL082C RRP14 chromosome 11 11 281973 280669 C 2005-12-15 1996-07-31 Essential protein, constituent of 66S pre-ribosomal particles; interacts with proteins involved in ribosomal biogenesis and cell polarity; member of the SURF-6 family
S000033529 CDS YKL082C 11 281973 280669 C 2005-12-15 1996-07-31
S000001564 ORF Verified YKL081W TEF4 EFC1 chromosome 11 L000002280 11 282535 284099 W 2005-12-15 1996-07-31 Translation elongation factor EF-1 gamma
S000033487 CDS YKL081W 11 282535 282739 W 2005-12-15 1996-07-31
S000033488 CDS YKL081W 11 283066 284099 W 2005-12-15 1996-07-31
S000033489 intron YKL081W 11 282740 283065 W 2005-12-15 1996-07-31
S000007301 snoRNA snR38 SNR38 chromosome 11 L000003053 11 282829 282923 W 2005-12-15 2000-05-19 C/D box small nucleolar RNA (snoRNA), guides 2'-O-methylation of large subunit (LSU) rRNA at position G2815
S000036768 noncoding_exon snR38 11 282829 282923 W 2005-12-15 2000-05-19
S000001563 ORF Verified YKL080W VMA5 VAT3|CSL5 chromosome 11 L000002460 11 284674 285852 W 2005-12-15 1996-07-31 Subunit C of the eight-subunit V1 peripheral membrane domain of vacuolar H+-ATPase (V-ATPase), an electrogenic proton pump found throughout the endomembrane system; required for the V1 domain to assemble onto the vacuolar membrane
S000032748 CDS YKL080W 11 284674 285852 W 2005-12-15 1996-07-31
S000001562 ORF Verified YKL079W SMY1 chromosome 11 L000001940 11 286247 288217 W 2005-12-15 1996-07-31 Protein that interacts with Myo2p, proposed to be involved in exocytosis; N-terminal domain is related to the motor domain of kinesins
S000031903 CDS YKL079W 11 286247 288217 W 2005-12-15 1996-07-31
S000001561 ORF Verified YKL078W DHR2 chromosome 11 11 288489 290696 W 2005-12-15 1996-07-31 Predominantly nucleolar DEAH-box ATP-dependent RNA helicase, required for 18S rRNA synthesis
S000031760 CDS YKL078W 11 288489 290696 W 2005-12-15 1996-07-31
S000001560 ORF Uncharacterized YKL077W chromosome 11 11 291097 292275 W 2005-12-15 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole
S000031669 CDS YKL077W 11 291097 292275 W 2005-12-15 1996-07-31
S000001559 ORF Dubious YKL076C PSY1 chromosome 11 11 292865 292482 C 2005-12-15 1996-07-31 Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 69% of ORF overlaps the uncharacterized ORF YKL075C
S000031531 CDS YKL076C 11 292865 292482 C 2005-12-15 1996-07-31
S000001558 ORF Uncharacterized YKL075C chromosome 11 11 293952 292600 C 2005-12-15 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; proposed to be involved in resistance to streptozotocin and camptothecin
S000030667 CDS YKL075C 11 293952 292600 C 2005-12-15 1996-07-31
S000001557 ORF Verified YKL074C MUD2 chromosome 11 L000002794 11 295837 294254 C 2005-12-15 1996-07-31 Protein involved in early pre-mRNA splicing; component of the pre-mRNA-U1 snRNP complex, the commitment complex; interacts with Msl5p/BBP splicing factor and Sub2p; similar to metazoan splicing factor U2AF65
S000030581 CDS YKL074C 11 295837 294254 C 2005-12-15 1996-07-31
S000001556 ORF Verified YKL073W LHS1 SSI1|CER1 chromosome 11 L000004102 11 296074 298719 W 2005-12-15 1996-07-31 Molecular chaperone of the endoplasmic reticulum lumen, involved in polypeptide translocation and folding; nucleotide exchange factor for the ER lumenal Hsp70 chaperone Kar2p; regulated by the unfolded protein response pathway
S000030511 CDS YKL073W 11 296074 298719 W 2005-12-15 1996-07-31
S000001555 ORF Verified YKL072W STB6 chromosome 11 L000003369 11 299226 301526 W 2005-12-15 1996-07-31 Protein that binds Sin3p in a two-hybrid assay
S000030364 CDS YKL072W 11 299226 301526 W 2005-12-15 1996-07-31
S000007052 long_terminal_repeat YKLCdelta5 chromosome 11 11 302269 301978 C 2005-12-15 2000-05-19 Ty1 LTR
S000006774 tRNA tW(CCA)K chromosome 11 L000003633 11 302562 302667 W 2005-12-15 2000-05-19 tRNA-Trp
S000033327 intron tW(CCA)K 11 302598 302631 W 2005-12-15 2000-05-19
S000033325 noncoding_exon tW(CCA)K 11 302562 302597 W 2005-12-15 2000-05-19
S000033326 noncoding_exon tW(CCA)K 11 302632 302667 W 2005-12-15 2000-05-19
S000001554 ORF Uncharacterized YKL071W chromosome 11 11 304758 305528 W 2005-12-15 1996-07-31 Putative protein of unknown function; expression induced in cells treated with the mycotoxin patulin, and also the quinone methide triterpene celastrol; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm
S000037597 CDS YKL071W 11 304758 305528 W 2005-12-15 1996-07-31
S000001553 ORF Uncharacterized YKL070W chromosome 11 11 305855 306364 W 2005-12-15 1996-07-31 Putative protein of unknown function; expression induced in cells treated with mycotoxins patulin or citrinin; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
S000037452 CDS YKL070W 11 305855 306364 W 2005-12-15 1996-07-31
S000001552 ORF Verified YKL069W fRMsr|YKG9 chromosome 11 11 306929 307471 W 2005-12-15 1996-07-31 Methionine-R-sulfoxide reductase, reduces the R enantiomer of free Met-SO, in contrast to Ycl033Cp which reduces Met-R-SO in a peptide linkage; has a role in protection against oxidative stress
S000036847 CDS YKL069W 11 306929 307471 W 2005-12-15 1996-07-31
S000006760 tRNA tV(AAC)K1 chromosome 11 L000003641 11 307861 307788 C 2005-12-15 2000-05-19 tRNA-Val
S000037869 noncoding_exon tV(AAC)K1 11 307861 307788 C 2005-12-15 2000-05-19
S000028524 ORF Uncharacterized YKL068W-A chromosome 11 11 308850 309086 W 2005-12-15 2003-07-29 Putative protein of unknown function; identified by homology to Ashbya gossypii
S000030323 CDS YKL068W-A 11 308850 309086 W 2005-12-15 2003-07-29
S000001551 ORF Verified YKL068W NUP100 NSP100 chromosome 11 L000001292 11 309843 312722 W 2005-12-15 1996-07-31 Subunit of the nuclear pore complex (NPC) that is localized to both sides of the pore; contains a repetitive GLFG motif that interacts with mRNA export factor Mex67p and with karyopherin Kap95p; homologous to Nup116p
S000036782 CDS YKL068W 11 309843 312722 W 2005-12-15 1996-07-31
S000006598 tRNA tH(GUG)K chromosome 11 L000003640 11 313116 313045 C 2005-12-15 2000-05-19 tRNA-His
S000033889 noncoding_exon tH(GUG)K 11 313116 313045 C 2005-12-15 2000-05-19
S000007053 long_terminal_repeat YKLCdelta6 chromosome 11 11 313563 313246 C 2005-12-15 2000-05-19 Ty1 LTR
S000007057 long_terminal_repeat YKLWdelta7 chromosome 11 11 313837 314168 W 2005-12-15 2000-05-19 Ty1 LTR
S000001550 ORF Verified YKL067W YNK1 NDK1 chromosome 11 L000002536 11 314456 314917 W 2005-12-15 1996-07-31 Nucleoside diphosphate kinase, catalyzes the transfer of gamma phosphates from nucleoside triphosphates, usually ATP, to nucleoside diphosphates by a mechanism that involves formation of an autophosphorylated enzyme intermediate
S000036722 CDS YKL067W 11 314456 314917 W 2005-12-15 1996-07-31
S000001549 ORF Dubious YKL066W chromosome 11 11 314925 315368 W 2005-12-15 1996-07-31 Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; partially overlaps the verified gene YNK1
S000036665 CDS YKL066W 11 314925 315368 W 2005-12-15 1996-07-31
S000113563 ORF Uncharacterized YKL065W-A chromosome 11 11 315598 315819 W 2005-12-15 2005-11-17 Putative protein of unknown function
S000113565 CDS YKL065W-A 11 315598 315819 W 2005-12-15 2005-11-17
S000001548 ORF Verified YKL065C YET1 chromosome 11 L000003484 11 316701 316081 C 2005-12-15 1996-07-31 Endoplasmic reticulum transmembrane protein; may interact with ribosomes, based on co-purification experiments; homolog of human BAP31 protein
S000035692 CDS YKL065C 11 316701 316081 C 2005-12-15 1996-07-31
S000001547 ORF Verified YKL064W MNR2 chromosome 11 L000003203 11 317408 320317 W 2005-12-15 1996-07-31 Vacuolar membrane protein required for magnesium homeostasis; putative magnesium transporter; has similarity to Alr1p and Alr2p, which mediate influx of Mg2+ and other divalent cations
S000035630 CDS YKL064W 11 317408 320317 W 2005-12-15 1996-07-31
S000001546 ORF Uncharacterized YKL063C chromosome 11 11 321162 320659 C 2005-12-15 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the Golgi
S000035510 CDS YKL063C 11 321162 320659 C 2005-12-15 1996-07-31
S000001545 ORF Verified YKL062W MSN4 chromosome 11 L000001199 11 322872 324764 W 2005-12-15 1996-07-31 Transcriptional activator related to Msn2p; activated in stress conditions, which results in translocation from the cytoplasm to the nucleus; binds DNA at stress response elements of responsive genes, inducing gene expression
S000034556 CDS YKL062W 11 322872 324764 W 2005-12-15 1996-07-31
S000001544 ORF Uncharacterized YKL061W chromosome 11 11 325415 325756 W 2005-12-15 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endosome
S000034423 CDS YKL061W 11 325415 325756 W 2005-12-15 1996-07-31
S000001543 ORF Verified YKL060C FBA1 LOT1 chromosome 11 L000000604 11 327131 326052 C 2005-12-15 1996-07-31 Fructose 1,6-bisphosphate aldolase, required for glycolysis and gluconeogenesis; catalyzes conversion of fructose 1,6 bisphosphate to glyceraldehyde-3-P and dihydroxyacetone-P; locates to mitochondrial outer surface upon oxidative stress
S000034296 CDS YKL060C 11 327131 326052 C 2005-12-15 1996-07-31
S000001542 ORF Verified YKL059C MPE1 chromosome 11 11 329087 327762 C 2005-12-15 1996-07-31 Essential conserved subunit of CPF (cleavage and polyadenylation factor), plays a role in 3' end formation of mRNA via the specific cleavage and polyadenylation of pre-mRNA, contains a putative RNA-binding zinc knuckle motif
S000033369 CDS YKL059C 11 329087 327762 C 2005-12-15 1996-07-31
S000118403 ARS ARS1109 ARSXI-329 chromosome 11 11 329326 329574 2006-08-30 2006-08-30 Autonomously Replicating Sequence
S000001541 ORF Verified YKL058W TOA2 chromosome 11 L000002317 11 329810 330178 W 2005-12-15 1996-07-31 TFIIA small subunit; involved in transcriptional activation, acts as antirepressor or as coactivator; homologous to smallest subunit of human and Drosophila TFIIA
S000033347 CDS YKL058W 11 329810 330178 W 2005-12-15 1996-07-31
S000001540 ORF Verified YKL057C NUP120 RAT2 chromosome 11 L000003138 11 333613 330500 C 2005-12-15 1996-07-31 Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), required for even distribution of NPCs around the nuclear envelope, involved in establishment of a normal nucleocytoplasmic concentration gradient of the GTPase Gsp1p
S000032581 CDS YKL057C 11 333613 330500 C 2005-12-15 1996-07-31
S000001539 ORF Verified YKL056C TMA19 MMI1|RBF18 chromosome 11 11 334559 334056 C 2005-12-15 1996-07-31 Protein that associates with ribosomes; homolog of translationally controlled tumor protein; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and relocates to the mitochondrial outer surface upon oxidative stress
S000032498 CDS YKL056C 11 334559 334056 C 2005-12-15 1996-07-31
S000001538 ORF Verified YKL055C OAR1 chromosome 11 11 335801 334965 C 2005-12-15 1996-07-31 Mitochondrial 3-oxoacyl-[acyl-carrier-protein] reductase, may comprise a type II mitochondrial fatty acid synthase along with Mct1p
S000032402 CDS YKL055C 11 335801 334965 C 2005-12-15 1996-07-31
S000001537 ORF Verified YKL054C DEF1 VID31 chromosome 11 11 338397 336181 C 2005-12-15 1996-07-31 RNAPII degradation factor, forms a complex with Rad26p in chromatin, enables ubiquitination and proteolysis of RNAPII present in an elongation complex; mutant is deficient in Zip1p loading onto chromosomes during meiosis
S000031390 CDS YKL054C 11 338397 336181 C 2005-12-15 1996-07-31
S000007243 ORF Verified YKL053C-A MDM35 chromosome 11 11 339086 338826 C 2005-12-15 1999-07-17 Mitochondrial intermembrane space protein; mutation affects mitochondrial distribution and morphology; contains twin cysteine-x9-cysteine motifs
S000032996 CDS YKL053C-A 11 339086 338826 C 2005-12-15 1999-07-17
S000001536 ORF Dubious YKL053W chromosome 11 11 339216 339590 W 2005-12-15 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified ORF ASK1
S000031321 CDS YKL053W 11 339216 339590 W 2005-12-15 1996-07-31
S000001535 ORF Verified YKL052C ASK1 chromosome 11 11 340190 339312 C 2005-12-15 1996-07-31|2008-06-03 Essential subunit of the Dam1 complex (aka DASH complex), couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; phosphorylated during the cell cycle by cyclin-dependent kinases
S000031156 CDS YKL052C 11 340190 339312 C 2005-12-15 1996-07-31|2008-06-03
S000001534 ORF Verified YKL051W SFK1 chromosome 11 11 340956 342017 W 2005-12-15 1996-07-31 Plasma membrane protein that may act together with or upstream of Stt4p to generate normal levels of the essential phospholipid PI4P, at least partially mediates proper localization of Stt4p to the plasma membrane
S000031104 CDS YKL051W 11 340956 342017 W 2005-12-15 1996-07-31
S000001533 ORF Verified YKL050C chromosome 11 11 345264 342496 C 2005-12-15 1996-07-31 Protein of unknown function; the YKL050W protein is a target of the SCFCdc4 ubiquitin ligase complex and YKL050W transcription is regulated by Azf1p
S000030029 CDS YKL050C 11 345264 342496 C 2005-12-15 1996-07-31
S000001532 ORF Verified YKL049C CSE4 CSL2 chromosome 11 L000002719 11 346408 345719 C 2005-12-15 2003-01-10|1996-07-31|2003-01-07 Centromere protein that resembles histone H3, required for proper kinetochore function; homolog of human CENP-A
S000037076 CDS YKL049C 11 346408 345719 C 2005-12-15 2003-01-10|1996-07-31|2003-01-07
S000001531 ORF Verified YKL048C ELM1 LDB9 chromosome 11 L000000548 11 348780 346858 C 2005-12-15 1996-07-31 Serine/threonine protein kinase that regulates cellular morphogenesis, septin behavior, and cytokinesis; required for the regulation of other kinases; forms part of the bud neck ring
S000036436 CDS YKL048C 11 348780 346858 C 2005-12-15 1996-07-31
S000001530 ORF Uncharacterized YKL047W chromosome 11 S000114863 11 349107 350657 W 2005-12-15 1996-07-31 Putative protein of unknown function, predicted to be palmitoylated; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm
S000036411 CDS YKL047W 11 349107 350657 W 2005-12-15 1996-07-31
S000001529 ORF Verified YKL046C DCW1 chromosome 11 11 352268 350919 C 2005-12-15 1996-07-31 Putative mannosidase, GPI-anchored membrane protein required for cell wall biosynthesis in bud formation;homologous to Dfg5p
S000036235 CDS YKL046C 11 352268 350919 C 2005-12-15 1996-07-31
S000001528 ORF Verified YKL045W PRI2 chromosome 11 L000001490 11 353137 354723 W 2005-12-15 1996-07-31 Subunit of DNA primase, which is required for DNA synthesis and double-strand break repair
S000036183 CDS YKL045W 11 353137 354723 W 2005-12-15 1996-07-31
S000001527 ORF Dubious YKL044W chromosome 11 11 355966 356286 W 2005-12-15 1996-07-31 Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000035237 CDS YKL044W 11 355966 356286 W 2005-12-15 1996-07-31
S000001526 ORF Verified YKL043W PHD1 chromosome 11 L000001417 11 356392 357492 W 2005-12-15 1996-07-31 Transcriptional activator that enhances pseudohyphal growth; regulates expression of FLO11, an adhesin required for pseudohyphal filament formation; similar to StuA, an A. nidulans developmental regulator; potential Cdc28p substrate
S000035082 CDS YKL043W 11 356392 357492 W 2005-12-15 1996-07-31
S000001525 ORF Verified YKL042W SPC42 chromosome 11 L000004148 11 358119 359210 W 2005-12-15 1996-07-31 Central plaque component of spindle pole body (SPB); involved in SPB duplication, may facilitate attachment of the SPB to the nuclear membrane
S000034904 CDS YKL042W 11 358119 359210 W 2005-12-15 1996-07-31
S000001524 ORF Verified YKL041W VPS24 VPL26|DID3 chromosome 11 L000004158 11 359786 360460 W 2005-12-15 1996-07-31 One of four subunits of the endosomal sorting complex required for transport III (ESCRT-III); forms an ESCRT-III subcomplex with Did4p; involved in the sorting of transmembrane proteins into the multivesicular body (MVB) pathway
S000034024 CDS YKL041W 11 359786 360460 W 2005-12-15 1996-07-31
S000001523 ORF Verified YKL040C NFU1 NUB1 chromosome 11 L000004771 11 361471 360701 C 2005-12-15 1996-07-31 Protein involved in iron metabolism in mitochondria; similar to NifU, which is a protein required for the maturation of the Fe/S clusters of nitrogenase in nitrogen-fixing bacteria
S000033793 CDS YKL040C 11 361471 360701 C 2005-12-15 1996-07-31
S000001522 ORF Verified YKL039W PTM1 chromosome 11 L000001524 11 362265 363836 W 2005-12-15 1996-07-31|2005-12-14 Protein of unknown function, copurifies with late Golgi vesicles containing the v-SNARE Tlg2p
S000035013 CDS YKL039W 11 362265 363836 W 2005-12-15 1996-07-31|2005-12-14
S000006460 snoRNA snR69 SNR69 chromosome 11 L000004538 11 364419 364519 W 2005-12-15 2000-05-19 C/D box small nucleolar RNA (snoRNA), guides 2'-O-methylation of large subunit (LSU) rRNA at position C2948
S000030857 noncoding_exon snR69 11 364419 364519 W 2005-12-15 2000-05-19
S000001521 ORF Verified YKL038W RGT1 chromosome 11 L000003482 11 365248 368760 W 2005-12-15 1996-07-31 Glucose-responsive transcription factor that regulates expression of several glucose transporter (HXT) genes in response to glucose; binds to promoters and acts both as a transcriptional activator and repressor
S000034833 CDS YKL038W 11 365248 368760 W 2005-12-15 1996-07-31
S000001520 ORF Verified YKL037W AIM26 chromosome 11 11 369008 369364 W 2005-12-15 1996-07-31 Putative protein of unknown function; null mutant is viable and displays elevated frequency of mitochondrial genome loss; null mutation confers sensitivity to tunicamycin and DTT
S000032888 CDS YKL037W 11 369008 369364 W 2005-12-15 1996-07-31
S000001518 ORF Verified YKL035W UGP1 chromosome 11 L000003118 11 369534 371033 W 2005-12-15 1996-07-31 UDP-glucose pyrophosphorylase (UGPase), catalyses the reversible formation of UDP-Glc from glucose 1-phosphate and UTP, involved in a wide variety of metabolic pathways, expression modulated by Pho85p through Pho4p
S000032697 CDS YKL035W 11 369534 371033 W 2005-12-15 1996-07-31
S000001519 ORF Dubious YKL036C chromosome 11 11 369563 369171 C 2005-12-15 1996-07-31 Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; partially overlaps the essential gene UGP1 gene and uncharacterized ORF YKL037W
S000032729 CDS YKL036C 11 369563 369171 C 2005-12-15 1996-07-31
S000001517 ORF Verified YKL034W TUL1 chromosome 11 11 371472 373748 W 2005-12-15 1996-07-31 Golgi-localized RING-finger ubiquitin ligase (E3), involved in ubiquitinating and sorting membrane proteins that contain polar transmembrane domains to multivesicular bodies for delivery to the vacuole for quality control purposes
S000032625 CDS YKL034W 11 371472 373748 W 2005-12-15 1996-07-31
S000007242 ORF Uncharacterized YKL033W-A chromosome 11 11 374148 374858 W 2005-12-15 2004-02-12|1999-07-17 Putative protein of unknown function; similar to uncharacterized proteins from other fungi
S000036238 CDS YKL033W-A 11 374148 374858 W 2005-12-15 2004-02-12|1999-07-17
S000001516 ORF Verified YKL033W TTI1 FMP47 chromosome 11 11 375099 378215 W 2005-12-15 1996-07-31 Putative protein of unknown function; subunit of the ASTRA complex which is part of the chromatin remodeling machinery; similar to S. pombe Tti1p; detected in highly purified mitochondria in high-throughput studies
S000031614 CDS YKL033W 11 375099 378215 W 2005-12-15 1996-07-31
S000006761 tRNA tV(AAC)K2 chromosome 11 L000003634 11 379323 379396 W 2005-12-15 2000-05-19 tRNA-Val
S000037883 noncoding_exon tV(AAC)K2 11 379323 379396 W 2005-12-15 2000-05-19
S000001515 ORF Verified YKL032C IXR1 ORD1 chromosome 11 L000000881 11 381501 379708 C 2005-12-15 1996-07-31 Protein that binds DNA containing intrastrand cross-links formed by cisplatin, contains two HMG (high mobility group box) domains, which confer the ability to bend cisplatin-modified DNA; mediates aerobic transcriptional repression of COX5b
S000031407 CDS YKL032C 11 381501 379708 C 2005-12-15 1996-07-31
S000001514 ORF Dubious YKL031W chromosome 11 11 381715 382128 W 2005-12-15 1996-07-31 Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species
S000031365 CDS YKL031W 11 381715 382128 W 2005-12-15 1996-07-31
S000001513 ORF Dubious YKL030W chromosome 11 11 382141 382746 W 2005-12-15 1996-07-31 Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; partially overlaps the verified gene MAE1
S000030446 CDS YKL030W 11 382141 382746 W 2005-12-15 1996-07-31
S000001512 ORF Verified YKL029C MAE1 chromosome 11 L000003506 11 384368 382359 C 2005-12-15 1996-07-31 Mitochondrial malic enzyme, catalyzes the oxidative decarboxylation of malate to pyruvate, which is a key intermediate in sugar metabolism and a precursor for synthesis of several amino acids
S000030570 CDS YKL029C 11 384368 382359 C 2005-12-15 1996-07-31
S000001511 ORF Verified YKL028W TFA1 chromosome 11 L000002595 11 385401 386849 W 2005-12-15 1996-07-31 TFIIE large subunit, involved in recruitment of RNA polymerase II to the promoter, activation of TFIIH, and promoter opening
S000036771 CDS YKL028W 11 385401 386849 W 2005-12-15 1996-07-31
S000001510 ORF Verified YKL027W chromosome 11 11 387205 388548 W 2005-12-15 1996-07-31 Protein of unknown function, localized to the mitochondrial outer membrane
S000036685 CDS YKL027W 11 387205 388548 W 2005-12-15 1996-07-31
S000118404 ARS ARS1112 ARSXI-389 chromosome 11 11 388613 388907 2006-08-30 2006-08-30 Autonomously Replicating Sequence
S000001509 ORF Verified YKL026C GPX1 chromosome 11 11 389526 389023 C 2005-12-15 1996-07-31 Phospholipid hydroperoxide glutathione peroxidase induced by glucose starvation that protects cells from phospholipid hydroperoxides and nonphospholipid peroxides during oxidative stress
S000036560 CDS YKL026C 11 389526 389023 C 2005-12-15 1996-07-31
S000001508 ORF Verified YKL025C PAN3 ECM35 chromosome 11 L000003340 11 391922 389883 C 2005-12-15 1996-07-31 Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex, which acts to control poly(A) tail length and regulate the stoichiometry and activity of postreplication repair complexes
S000035620 CDS YKL025C 11 391922 389883 C 2005-12-15 1996-07-31
S000001507 ORF Verified YKL024C URA6 SOC8 chromosome 11 L000002435 11 392783 392169 C 18 2005-12-15 1996-07-31 Uridylate kinase, catalyzes the seventh enzymatic step in the de novo biosynthesis of pyrimidines, converting uridine monophosphate (UMP) into uridine-5'-diphosphate (UDP)
S000035543 CDS YKL024C 11 392783 392169 C 2005-12-15 1996-07-31
S000113559 ORF Uncharacterized YKL023C-A chromosome 11 11 393016 392789 C 2005-12-15 2005-11-17 Putative protein of unknown function
S000113560 CDS YKL023C-A 11 393016 392789 C 2005-12-15 2005-11-17
S000001506 ORF Uncharacterized YKL023W chromosome 11 11 393364 394197 W 2005-12-15 1996-07-31 Putative protein of unknown function, predicted by computational methods to be involved in mRNA degradation; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm
S000035506 CDS YKL023W 11 393364 394197 W 2005-12-15 1996-07-31
S000001505 ORF Verified YKL022C CDC16 chromosome 11 L000000256 11 396891 394369 C -15 2005-12-15 1996-07-31 Subunit of the anaphase-promoting complex/cyclosome (APC/C), which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; required for sporulation
S000034410 CDS YKL022C 11 396891 394369 C 2005-12-15 1996-07-31
S000001504 ORF Verified YKL021C MAK11 chromosome 11 L000000984 11 398393 396987 C -16 2005-12-15 1996-07-31 Protein involved in an early, nucleolar step of 60S ribosomal subunit biogenesis; essential for cell growth and replication of killer M1 dsRNA virus; contains four beta-transducin repeats
S000034298 CDS YKL021C 11 398393 396987 C 2005-12-15 1996-07-31
S000001503 ORF Verified YKL020C SPT23 chromosome 11 L000002041 11 401723 398475 C 2005-12-15 1996-07-31 ER membrane protein involved in regulation of OLE1 transcription, acts with homolog Mga2p; inactive ER form dimerizes and one subunit is then activated by ubiquitin/proteasome-dependent processing followed by nuclear targeting
S000034167 CDS YKL020C 11 401723 398475 C 2005-12-15 1996-07-31
S000001502 ORF Verified YKL019W RAM2 chromosome 11 L000001580 11 402211 403161 W 2005-12-15 1996-07-31 Alpha subunit of both the farnesyltransferase and type I geranylgeranyltransferase that catalyze prenylation of proteins containing a CAAX consensus motif; essential protein required for membrane localization of Ras proteins and a-factor
S000034702 CDS YKL019W 11 402211 403161 W 2005-12-15 1996-07-31
S000007615 ORF Uncharacterized YKL018C-A chromosome 11 11 403522 403223 C 2005-12-15 2001-02-26 Putative protein of unknown function; identified by homology; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm
S000037213 CDS YKL018C-A 11 403522 403223 C 2005-12-15 2001-02-26
S000001501 ORF Verified YKL018W SWD2 SAF37|CPS35 chromosome 11 11 403745 404734 W 2005-12-15 1996-07-31 Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lys 4 and is involved in telomeric silencing; subunit of CPF (cleavage and polyadenylation factor), a complex involved in RNAP II transcription termination
S000034635 CDS YKL018W 11 403745 404734 W 2005-12-15 1996-07-31
S000001500 ORF Verified YKL017C HCS1 DIP1 chromosome 11 L000003087|L000004272 11 406884 404833 C 2005-12-15 1996-07-31 Hexameric DNA polymerase alpha-associated DNA helicase A involved in lagging strand DNA synthesis; contains single-stranded DNA stimulated ATPase and dATPase activities; replication protein A stimulates helicase and ATPase activities
S000034495 CDS YKL017C 11 406884 404833 C 2005-12-15 1996-07-31
S000001499 ORF Verified YKL016C ATP7 chromosome 11 L000000146 11 407632 407108 C 2005-12-15 1996-07-31 Subunit d of the stator stalk of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis
S000032473 CDS YKL016C 11 407632 407108 C 2005-12-15 1996-07-31
S000001498 ORF Verified YKL015W PUT3 chromosome 11 L000001537|L000001528 11 408187 411126 W -5 2005-12-15 1996-07-31 Transcriptional activator of proline utilization genes, constitutively binds PUT1 and PUT2 promoter sequences and undergoes a conformational change to form the active state; has a Zn(2)-Cys(6) binuclear cluster domain
S000032428 CDS YKL015W 11 408187 411126 W 2005-12-15 1996-07-31
S000001497 ORF Verified YKL014C URB1 NPA1 chromosome 11 11 416556 411262 C 2005-12-15 1996-07-31 Nucleolar protein required for the normal accumulation of 25S and 5.8S rRNAs, associated with the 27SA2 pre-ribosomal particle; proposed to be involved in the biogenesis of the 60S ribosomal subunit
S000032267 CDS YKL014C 11 416556 411262 C 2005-12-15 1996-07-31
S000118405 ARS ARS1113 ARSXI-417 chromosome 11 11 416828 417060 2006-08-30 2006-08-30 Autonomously Replicating Sequence
S000001496 ORF Verified YKL013C ARC19 chromosome 11 L000004034 11 417666 417151 C 2005-12-15 1996-07-31 Subunit of the ARP2/3 complex, which is required for the motility and integrity of cortical actin patches
S000031281 CDS YKL013C 11 417666 417151 C 2005-12-15 1996-07-31
S000001495 ORF Verified YKL012W PRP40 chromosome 11 L000003078 11 417953 419704 W 2005-12-15 1996-07-31 U1 snRNP protein involved in splicing, interacts with the branchpoint-binding protein during the formation of the second commitment complex
S000031220 CDS YKL012W 11 417953 419704 W 2005-12-15 1996-07-31
S000001494 ORF Verified YKL011C CCE1 MGT1 chromosome 11 L000000236 11 420859 419798 C -2 2005-12-15 1996-07-31 Mitochondrial cruciform cutting endonuclease, cleaves Holliday junctions formed during recombination of mitochondrial DNA
S000031036 CDS YKL011C 11 420859 419798 C 2005-12-15 1996-07-31
S000001493 ORF Verified YKL010C UFD4 chromosome 11 L000003509 11 425518 421067 C 2005-12-15 1996-07-31 Ubiquitin-protein ligase (E3) that interacts with Rpt4p and Rpt6p, two subunits of the 19S particle of the 26S proteasome; cytoplasmic E3 involved in the degradation of ubiquitin fusion proteins
S000030049 CDS YKL010C 11 425518 421067 C 2005-12-15 1996-07-31
S000001492 ORF Verified YKL009W MRT4 chromosome 11 L000004450 11 425885 426595 W 2005-12-15 1996-07-31 Protein involved in mRNA turnover and ribosome assembly, localizes to the nucleolus
S000030485 CDS YKL009W 11 425885 426595 W 2005-12-15 1996-07-31
S000001491 ORF Verified YKL008C LAC1 DGT1 chromosome 11 11 428194 426938 C 2005-12-15 1996-07-31 Ceramide synthase component, involved in synthesis of ceramide from C26(acyl)-coenzyme A and dihydrosphingosine or phytosphingosine, functionally equivalent to Lag1p
S000030290 CDS YKL008C 11 428194 426938 C 2005-12-15 1996-07-31
S000001490 ORF Verified YKL007W CAP1 chromosome 11 L000000214 11 428945 429751 W -2 2005-12-15 1996-07-31 Alpha subunit of the capping protein (CP) heterodimer (Cap1p and Cap2p) which binds to the barbed ends of actin filaments preventing further polymerization; localized predominantly to cortical actin patches
S000030183 CDS YKL007W 11 428945 429751 W 2005-12-15 1996-07-31
S000002101 ORF Verified YKL006C-A SFT1 chromosome 11 L000002949 11 430275 429841 C 2005-12-15 1996-07-31 Intra-Golgi v-SNARE, required for transport of proteins between an early and a later Golgi compartment
S000037319 CDS YKL006C-A 11 430098 429841 C 2005-12-15 1996-07-31
S000037318 CDS YKL006C-A 11 430275 430240 C 2005-12-15 1996-07-31
S000037320 intron YKL006C-A 11 430239 430099 C 2005-12-15 1996-07-31
S000114301 snoRNA snR87 SNR87 chromosome 11 11 430781 430673 C 2006-03-02 2006-03-02 C/D box small nucleolar RNA (snoRNA); guides 2'-O-methylation of small subunit (SSU) rRNA at position A436
S000114518 noncoding_exon snR87 11 430781 430673 C 2006-03-02 2006-03-02
S000001489 ORF Verified YKL006W RPL14A chromosome 11 L000002706 11 431549 432363 W 2005-12-15 1996-07-31 N-terminally acetylated protein component of the large (60S) ribosomal subunit, nearly identical to Rpl14Bp and has similarity to rat L14 ribosomal protein; rpl14a csh5 double null mutant exhibits synthetic slow growth
S000030075 CDS YKL006W 11 431549 431677 W 2005-12-15 1996-07-31
S000030076 CDS YKL006W 11 432076 432363 W 2005-12-15 1996-07-31
S000030077 intron YKL006W 11 431678 432075 W 2005-12-15 1996-07-31
S000001488 ORF Verified YKL005C BYE1 chromosome 11 11 434520 432736 C 2005-12-15 1996-07-31 Negative regulator of transcription elongation, contains a TFIIS-like domain and a PHD finger, multicopy suppressor of temperature-sensitive ess1 mutations, probably binds RNA polymerase II large subunit
S000036319 CDS YKL005C 11 434520 432736 C 2005-12-15 1996-07-31
S000001487 ORF Verified YKL004W AUR1 chromosome 11 L000002767 11 435223 436428 W 2005-12-15 1996-07-31 Phosphatidylinositol:ceramide phosphoinositol transferase (IPC synthase), required for sphingolipid synthesis; can mutate to confer aureobasidin A resistance
S000036280 CDS YKL004W 11 435223 436428 W 2005-12-15 1996-07-31
S000001486 ORF Verified YKL003C MRP17 chromosome 11 L000002616 11 437135 436740 C 2005-12-15 1996-07-31 Mitochondrial ribosomal protein of the small subunit; MRP17 exhibits genetic interactions with PET122, encoding a COX3-specific translational activator
S000036065 CDS YKL003C 11 437135 436740 C 2005-12-15 1996-07-31
S000001485 ORF Verified YKL002W DID4 VPS14|CHM2|VPS2|VPT14|VPL2|REN1|GRD7 chromosome 11 L000002955 11 437421 438187 W 2005-12-15 2000-07-22|1996-07-31 Class E Vps protein of the ESCRT-III complex, required for sorting of integral membrane proteins into lumenal vesicles of multivesicular bodies, and for delivery of newly synthesized vacuolar enzymes to the vacuole, involved in endocytosis
S000035271 CDS YKL002W 11 437421 437480 W 2005-12-15 2000-07-22|1996-07-31
S000035272 CDS YKL002W 11 437549 438187 W 2005-12-15 2000-07-22
S000035273 intron YKL002W 11 437481 437548 W 2005-12-15 2000-07-22
S000001484 ORF Verified YKL001C MET14 chromosome 11 L000001086 11 439028 438420 C .8 2005-12-15 1996-07-31 Adenylylsulfate kinase, required for sulfate assimilation and involved in methionine metabolism
S000034979 CDS YKL001C 11 439028 438420 C 2005-12-15 1996-07-31
S000006472 centromere CEN11 CEN11 chromosome 11 L000000304 11 439889 439772 C 0 2005-12-15 2000-05-19|2004-10-08 Chromosome XI centromere
S000077299 CDEI CEN11 11 439889 439880 C 2005-12-15 2004-10-08
S000077300 CDEII CEN11 11 439879 439797 C 2005-12-15 2004-10-08
S000077301 CDEIII CEN11 11 439796 439772 C 2005-12-15 2004-10-08
S000001709 ORF Verified YKR001C VPS1 VPT26|VPL1|SPO15|LAM1|GRD1 chromosome 11 L000002006 11 442365 440251 C -1 2005-12-15 1996-07-31 Dynamin-like GTPase required for vacuolar sorting; also involved in actin cytoskeleton organization, late Golgi-retention of some proteins, regulating peroxisome biogenesis
S000030382 CDS YKR001C 11 442365 440251 C 2005-12-15 1996-07-31
S000001710 ORF Verified YKR002W PAP1 chromosome 11 L000001336 11 442875 444581 W -1 2005-12-15 1996-07-31 Poly(A) polymerase, one of three factors required for mRNA 3'-end polyadenylation, forms multiprotein complex with polyadenylation factor I (PF I), also required for mRNA nuclear export; may also polyadenylate rRNAs
S000033778 CDS YKR002W 11 442875 444581 W 2005-12-15 1996-07-31
S000001711 ORF Verified YKR003W OSH6 chromosome 11 11 445024 446370 W 2005-12-15 1996-07-31 Member of an oxysterol-binding protein family with overlapping, redundant functions in sterol metabolism and which collectively perform a function essential for viability; GFP-fusion protein localizes to the cell periphery
S000033901 CDS YKR003W 11 445024 446370 W 2005-12-15 1996-07-31
S000118406 ARS ARS1114 ARSXI-448 chromosome 11 11 447663 447897 2006-08-30 2006-08-30 Autonomously Replicating Sequence
S000001712 ORF Verified YKR004C ECM9 YKR004C-A chromosome 11 L000003884 11 447679 446442 C 2005-12-15 2003-09-27|1996-07-31 Non-essential protein of unknown function
S000033974 CDS YKR004C 11 447349 446442 C 2005-12-15 2003-09-27
S000033973 CDS YKR004C 11 447679 447454 C 2005-12-15 2003-09-27|1996-07-31
S000033975 intron YKR004C 11 447453 447350 C 2005-12-15 2003-09-27
S000001713 ORF Uncharacterized YKR005C chromosome 11 11 449810 448164 C 2007-09-05 1996-07-31|2007-09-05 Putative protein of unknown function
S000123939 CDS YKR005C 11 449594 448164 C 2007-09-05 2007-09-05
S000034843 CDS YKR005C 11 449810 449664 C 2007-09-05 1996-07-31|2007-09-05
S000123938 intron YKR005C 11 449663 449595 C 2007-09-05 2007-09-05
S000001714 ORF Verified YKR006C MRPL13 YK105 chromosome 11 L000001164|L000002526 11 450860 450066 C 2005-12-15 2003-09-22|1996-07-31 Mitochondrial ribosomal protein of the large subunit, not essential for mitochondrial translation
S000034952 CDS YKR006C 11 450860 450066 C 2005-12-15 2003-09-22|1996-07-31
S000001715 ORF Verified YKR007W MEH1 GSE2|EGO1 chromosome 11 11 451077 451631 W 2005-12-15 1996-07-31 Component of the EGO complex, which is involved in the regulation of microautophagy, and of the GSE complex, which is required for proper sorting of amino acid permease Gap1p; loss results in a defect in vacuolar acidification
S000035149 CDS YKR007W 11 451077 451631 W 2005-12-15 1996-07-31
S000001716 ORF Verified YKR008W RSC4 chromosome 11 L000004026 11 451844 453721 W 2005-12-15 1996-07-31 Component of the RSC chromatin remodeling complex; found in close proximity to nucleosomal DNA; displaced from the surface of nucleosomal DNA after chromatin remodeling
S000036038 CDS YKR008W 11 451844 453721 W 2005-12-15 1996-07-31
S000001717 ORF Verified YKR009C FOX2 POX2 chromosome 11 L000000622 11 456697 453995 C 2005-12-15 1996-07-31 Multifunctional enzyme of the peroxisomal fatty acid beta-oxidation pathway; has 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase activities
S000036079 CDS YKR009C 11 456697 453995 C 2005-12-15 1996-07-31
S000007058 long_terminal_repeat YKRCdelta8 chromosome 11 11 458114 457783 C 2005-12-15 2000-05-19 Ty1 LTR
S000006642 tRNA tL(CAA)K chromosome 11 L000003635 11 458200 458313 W 2005-12-15 2000-05-19 tRNA-Leu
S000033792 intron tL(CAA)K 11 458238 458269 W 2005-12-15 2000-05-19
S000033790 noncoding_exon tL(CAA)K 11 458200 458237 W 2005-12-15 2000-05-19
S000033791 noncoding_exon tL(CAA)K 11 458270 458313 W 2005-12-15 2000-05-19
S000001718 ORF Verified YKR010C TOF2 chromosome 11 L000004245 11 460882 458567 C 2005-12-15 1996-07-31 Protein required for rDNA silencing and mitotic rDNA condensation; stimulates Cdc14p phosphatase activity and biphasic release to promote rDNA repeat segregation; required for condensin recruitment to the replication fork barrier site
S000034767 CDS YKR010C 11 460882 458567 C 2005-12-15 1996-07-31
S000001719 ORF Uncharacterized YKR011C TOS5 chromosome 11 11 462339 461278 C 2005-12-15 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleus
S000035735 CDS YKR011C 11 462339 461278 C 2005-12-15 1996-07-31
S000130139 ARS ARS1115 ARSXI-463 chromosome 11 11 462342 463385 2009-05-06 2009-05-06 Putative replication origin, identified in multiple array studies, not yet confirmed by plasmid-based assay
S000001721 ORF Verified YKR013W PRY2 YFW12 chromosome 11 L000003217 11 463602 464591 W 2005-12-15 1996-07-31 Protein of unknown function
S000037809 CDS YKR013W 11 463602 464591 W 2005-12-15 1996-07-31
S000001720 ORF Dubious YKR012C chromosome 11 11 463759 463382 C 2005-12-15 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene PRY2
S000035867 CDS YKR012C 11 463759 463382 C 2005-12-15 1996-07-31
S000001722 ORF Verified YKR014C YPT52 chromosome 11 L000002546 11 465714 465010 C 2005-12-15 1996-07-31 GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5; required for vacuolar protein sorting and endocytosis
S000037843 CDS YKR014C 11 465714 465010 C 2005-12-15 1996-07-31
S000001723 ORF Uncharacterized YKR015C chromosome 11 11 468310 466604 C 2005-12-15 1996-07-31 Putative protein of unknown function
S000029849 CDS YKR015C 11 468310 466604 C 2005-12-15 1996-07-31
S000001724 ORF Verified YKR016W FCJ1 AIM28|FMP13 chromosome 11 11 469360 470982 W 2005-12-15 1996-07-31 Mitochondrial inner membrane protein involved in formation and molecular structure of crista junctions; impairs oligomerization of F1F0-ATP synthase; null shows altered mitochondrial morphology and abnormal mitochondrial genome maintenance
S000030918 CDS YKR016W 11 469360 470982 W 2005-12-15 1996-07-31
S000001725 ORF Uncharacterized YKR017C chromosome 11 11 472992 471337 C 2005-12-15 1996-07-31 Putative protein of unknown function; contains a RING finger motif
S000030959 CDS YKR017C 11 472992 471337 C 2005-12-15 1996-07-31
S000001726 ORF Uncharacterized YKR018C chromosome 11 11 475543 473366 C 2005-12-15 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus
S000031035 CDS YKR018C 11 475543 473366 C 2005-12-15 1996-07-31
S000001727 ORF Verified YKR019C IRS4 chromosome 11 L000004394 11 477706 475859 C 2005-12-15 1996-07-31 EH domain-containing protein involved in regulating phosphatidylinositol 4,5-bisphosphate levels and autophagy; Irs4p and Tax4p bind and activate the PtdIns phosphatase Inp51p; Irs4p and Tax4p are involved in localizing Atg17p to the PAS
S000031136 CDS YKR019C 11 477706 475859 C 2005-12-15 1996-07-31
S000001728 ORF Verified YKR020W VPS51 VPS67|API3|WHI6 chromosome 11 11 477981 478475 W 2005-12-15 1996-07-31 Component of the GARP (Golgi-associated retrograde protein) complex, Vps51p-Vps52p-Vps53p-Vps54p, which is required for the recycling of proteins from endosomes to the late Golgi; links the (VFT/GARP) complex to the SNARE Tlg1p
S000030781 CDS YKR020W 11 477981 478475 W 2005-12-15 1996-07-31
S000001729 ORF Verified YKR021W ALY1 ART6 chromosome 11 11 478877 481624 W 2005-12-15 1996-07-31 Protein proposed to regulate the endocytosis of plasma membrane proteins by recruiting the ubiquitin ligase Rsp5p to its target in the plasma membrane; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm
S000030869 CDS YKR021W 11 478877 481624 W 2005-12-15 1996-07-31
S000001730 ORF Verified YKR022C NTR2 chromosome 11 11 482782 481814 C 2005-12-15 1996-07-31 Essential protein that forms a dimer with Ntr1p; also forms a trimer, with Ntr2p and the DExD/H-box RNA helicase Prp43p, that is involved in spliceosome disassembly
S000031793 CDS YKR022C 11 482782 481814 C 2005-12-15 1996-07-31
S000001731 ORF Uncharacterized YKR023W chromosome 11 11 483062 484654 W 2005-12-15 1996-07-31 Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
S000032021 CDS YKR023W 11 483062 484654 W 2005-12-15 1996-07-31
S000001732 ORF Verified YKR024C DBP7 chromosome 11 L000004205 11 487015 484787 C 2005-12-15 1996-07-31 Putative ATP-dependent RNA helicase of the DEAD-box family involved in ribosomal biogenesis; essential for growth under anaerobic conditions
S000032100 CDS YKR024C 11 487015 484787 C 2005-12-15 1996-07-31
S000001733 ORF Verified YKR025W RPC37 chromosome 11 11 487413 488261 W 2005-12-15 1996-07-31 RNA polymerase III subunit C37
S000034103 CDS YKR025W 11 487413 488261 W 2005-12-15 1996-07-31
S000001734 ORF Verified YKR026C GCN3 AAS2 chromosome 11 L000000682 11 489298 488381 C 7 2005-12-15 1996-07-31 Alpha subunit of the translation initiation factor eIF2B, the guanine-nucleotide exchange factor for eIF2; activity subsequently regulated by phosphorylated eIF2; first identified as a positive regulator of GCN4 expression
S000034170 CDS YKR026C 11 489298 488381 C 2005-12-15 1996-07-31
S000007059 long_terminal_repeat YKRCdelta9 chromosome 11 11 490059 489929 C 2005-12-15 2000-05-19 Ty1 LTR
S000007062 long_terminal_repeat YKRWdelta10 chromosome 11 11 490107 490430 W 2005-12-15 2000-05-19 Ty1 LTR
S000006703 tRNA tR(ACG)K chromosome 11 L000003636 11 490611 490683 W 2005-12-15 2000-05-19 tRNA-Arg (Arg2), one of 6 nuclear tRNA genes containing the tDNA-anticodon ACG (converted to ICG in the mature tRNA), decodes CGU, CGC, and probably CGA codons into arginine, one of 19 nuclear tRNAs for arginine
S000030411 noncoding_exon tR(ACG)K 11 490611 490683 W 2005-12-15 2000-05-19
S000001735 ORF Verified YKR027W BCH2 FMP50 chromosome 11 11 491007 493304 W 2005-12-15 1996-07-31 Member of the ChAPs family of proteins (Chs5p-Arf1p-binding proteins: Bch1p, Bch2p, Bud7p, Chs6p), that forms the exomer complex with Chs5p to mediate export of specific cargo proteins, including Chs3p, from the Golgi to the plasma membrane
S000034303 CDS YKR027W 11 491007 493304 W 2005-12-15 1996-07-31
S000001736 ORF Verified YKR028W SAP190 chromosome 11 L000002600 11 493900 497196 W 2005-12-15 1996-07-31 Protein that forms a complex with the Sit4p protein phosphatase and is required for its function; member of a family of similar proteins including Sap4p, Sap155p, and Sap185p
S000034368 CDS YKR028W 11 493900 497196 W 2005-12-15 1996-07-31
S000001737 ORF Verified YKR029C SET3 chromosome 11 11 499475 497220 C 2005-12-15 1996-07-31 Defining member of the SET3 histone deacetylase complex which is a meiosis-specific repressor of sporulation genes; necessary for efficient transcription by RNAPII; one of two yeast proteins that contains both SET and PHD domains
S000035298 CDS YKR029C 11 499475 497220 C 2005-12-15 1996-07-31
S000001738 ORF Verified YKR030W GMH1 MSG1 chromosome 11 11 499924 500745 W 2005-12-15 1996-07-31 Golgi membrane protein of unknown function, interacts with Gea1p and Gea2p; required for localization of Gea2p; computational analysis suggests a possible role in either cell wall synthesis or protein-vacuolar targeting
S000033925 CDS YKR030W 11 499924 500745 W 2005-12-15 1996-07-31
S000001739 ORF Verified YKR031C SPO14 PLD1 chromosome 11 L000002005|L000002946 11 506037 500986 C 18 2005-12-15 1996-07-31 Phospholipase D, catalyzes the hydrolysis of phosphatidylcholine, producing choline and phosphatidic acid; involved in Sec14p-independent secretion; required for meiosis and spore formation; differently regulated in secretion and meiosis
S000034013 CDS YKR031C 11 506037 500986 C 2005-12-15 1996-07-31
S000001740 ORF Dubious YKR032W chromosome 11 11 506159 506473 W 2005-12-15 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000034971 CDS YKR032W 11 506159 506473 W 2005-12-15 1996-07-31
S000001742 ORF Verified YKR034W DAL80 UGA43 chromosome 11 L000000480 11 506540 507349 W 14 2005-12-15 1996-07-31 Negative regulator of genes in multiple nitrogen degradation pathways; expression is regulated by nitrogen levels and by Gln3p; member of the GATA-binding family, forms homodimers and heterodimers with Deh1p
S000036062 CDS YKR034W 11 506540 507349 W 2005-12-15 1996-07-31
S000001741 ORF Dubious YKR033C chromosome 11 11 506946 506521 C 2005-12-15 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene DAL80
S000035067 CDS YKR033C 11 506946 506521 C 2005-12-15 1996-07-31
S000006435 ORF Verified YKR035W-A DID2 VPL30|VPS46|CHM1|FTI1 chromosome 11 L000004496 11 507581 508195 W 2005-12-15 1999-07-17 Class E protein of the vacuolar protein-sorting (Vps) pathway; binds Vps4p and directs it to dissociate ESCRT-III complexes; forms a functional and physical complex with Ist1p; human ortholog may be altered in breast tumors
S000034954 CDS YKR035W-A 11 507581 508195 W 2005-12-15 1999-07-17
S000001743 ORF Dubious YKR035C OPI8 chromosome 11 11 508203 507562 C 2005-12-15 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified gene DID2/YKR035W-A
S000036116 CDS YKR035C 11 508203 507562 C 2005-12-15 1996-07-31
S000001744 ORF Verified YKR036C CAF4 chromosome 11 L000003417 11 510275 508344 C 2006-05-08 1996-07-31|2006-05-08 WD40 repeat-containing protein associated with the CCR4-NOT complex, interacts in a Ccr4p-dependent manner with Ssn2p; also interacts with Fis1p, Mdv1p and Dnm1p and plays a role in mitochondrial fission
S000036256 CDS YKR036C 11 510275 508344 C 2006-05-08 1996-07-31|2006-05-08
S000001745 ORF Verified YKR037C SPC34 chromosome 11 L000004696 11 511439 510552 C 2005-12-15 1996-07-31 Essential subunit of the Dam1 complex (aka DASH complex), couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; also localized to nuclear side of spindle pole body
S000036356 CDS YKR037C 11 511439 510552 C 2005-12-15 1996-07-31
S000001746 ORF Verified YKR038C KAE1 chromosome 11 11 512801 511641 C 2005-12-15 2003-09-22|1996-07-31 Highly conserved putative glycoprotease proposed to be involved in transcription as a component of the EKC protein complex with Bud32p, Cgi121p, Pcc1p, and Gon7p; also identified as a component of the KEOPS protein complex
S000036434 CDS YKR038C 11 512801 511641 C 2005-12-15 2003-09-22|1996-07-31
S000006540 tRNA tD(GUC)K chromosome 11 L000003639 11 513045 512974 C 2005-12-15 2000-05-19 tRNA-Asp
S000037688 noncoding_exon tD(GUC)K 11 513045 512974 C 2005-12-15 2000-05-19
S000007060 long_terminal_repeat YKRCdelta11 chromosome 11 11 513488 513174 C 2005-12-15 2000-05-19 Ty1 LTR
S000001747 ORF Verified YKR039W GAP1 chromosome 11 L000000667 11 514705 516513 W 27 2005-12-15 1996-07-31 General amino acid permease; localization to the plasma membrane is regulated by nitrogen source
S000030283 CDS YKR039W 11 514705 516513 W 2005-12-15 1996-07-31
S000118407 ARS ARS1116 ARSXI-517 chromosome 11 11 516659 516907 2006-08-30 2006-08-30 Autonomously Replicating Sequence
S000007061 long_terminal_repeat YKRCdelta12 chromosome 11 11 517426 517095 C 2005-12-15 2000-05-19 Ty1 LTR
S000006516 tRNA tA(AGC)K2 chromosome 11 L000003637 11 517630 517702 W 2005-12-15 2000-05-19 tRNA-Ala (Ala1), one of 11 nuclear tRNA genes containing the tDNA-anticodon AGC (converted to IGC in the mature tRNA), decodes GCU and GCC codons into alanine, one of 16 nuclear tRNAs for alanine
S000036249 noncoding_exon tA(AGC)K2 11 517630 517702 W 2005-12-15 2000-05-19
S000001749 ORF Uncharacterized YKR041W chromosome 11 11 517840 518592 W 2005-12-15 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus
S000030043 CDS YKR041W 11 517840 518592 W 2005-12-15 1996-07-31
S000001748 ORF Dubious YKR040C chromosome 11 11 518208 517705 C 2005-12-15 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YKR041W
S000029852 CDS YKR040C 11 518208 517705 C 2005-12-15 1996-07-31
S000001750 ORF Verified YKR042W UTH1 chromosome 11 L000002766 11 519169 520266 W 2005-12-15 1996-07-31|2005-11-03 Mitochondrial outer membrane and cell wall localized SUN family member required for mitochondrial autophagy; involved in the oxidative stress response, life span during starvation, mitochondrial biogenesis, and cell death
S000031030 CDS YKR042W 11 519169 520266 W 2005-12-15 1996-07-31|2005-11-03
S000001751 ORF Uncharacterized YKR043C chromosome 11 11 521354 520539 C 2005-12-15 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus
S000031078 CDS YKR043C 11 521354 520539 C 2005-12-15 1996-07-31
S000001752 ORF Verified YKR044W UIP5 chromosome 11 11 521657 522988 W 2005-12-15 1996-07-31 Protein of unknown function that interacts with Ulp1p, a Ubl (ubiquitin-like protein)-specific protease for Smt3p protein conjugates
S000031276 CDS YKR044W 11 521657 522988 W 2005-12-15 1996-07-31
S000001753 ORF Uncharacterized YKR045C chromosome 11 11 523611 523060 C 2005-12-15 2003-09-22|1996-07-31 Putative protein of unknown function; epitope-tagged protein localizes to the cytoplasm
S000032206 CDS YKR045C 11 523611 523060 C 2005-12-15 2003-09-22|1996-07-31
S000001754 ORF Verified YKR046C PET10 chromosome 11 11 524716 523865 C 2005-12-15 1996-07-31 Protein of unknown function that co-purifies with lipid particles; expression pattern suggests a role in respiratory growth; computational analysis of large-scale protein-protein interaction data suggests a role in ATP/ADP exchange
S000032320 CDS YKR046C 11 524716 523865 C 2005-12-15 1996-07-31
S000001755 ORF Dubious YKR047W chromosome 11 11 524899 525204 W 2005-12-15 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene NAP1
S000032471 CDS YKR047W 11 524899 525204 W 2005-12-15 1996-07-31
S000001756 ORF Verified YKR048C NAP1 chromosome 11 L000001232 11 526282 525029 C 2005-12-15 1996-07-31 Protein that interacts with mitotic cyclin Clb2p; required for the regulation of microtubule dynamics during mitosis; controls bud morphogenesis; involved in the transport of H2A and H2B histones to the nucleus; phosphorylated by CK2
S000034427 CDS YKR048C 11 526282 525029 C 2005-12-15 1996-07-31
S000001757 ORF Verified YKR049C FMP46 chromosome 11 11 526873 526472 C 2005-12-15 1996-07-31 Putative redox protein containing a thioredoxin fold; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
S000034545 CDS YKR049C 11 526873 526472 C 2005-12-15 1996-07-31
S000001758 ORF Verified YKR050W TRK2 RPD2 chromosome 11 L000002335 11 527457 530126 W 15 2005-12-15 1996-07-31 Component of the Trk1p-Trk2p potassium transport system
S000033289 CDS YKR050W 11 527457 530126 W 2005-12-15 1996-07-31
S000001759 ORF Uncharacterized YKR051W chromosome 11 11 530588 531844 W 2005-12-15 1996-07-31 Putative protein of unknown function
S000034162 CDS YKR051W 11 530588 531844 W 2005-12-15 1996-07-31
S000001760 ORF Verified YKR052C MRS4 chromosome 11 L000001180 11 533106 532192 C 2005-12-15 1996-07-31 Iron transporter that mediates Fe2+ transport across the inner mitochondrial membrane; mitochondrial carrier family member, similar to and functionally redundant with Mrs3p; active under low-iron conditions; may transport other cations
S000034228 CDS YKR052C 11 533106 532192 C 2005-12-15 1996-07-31
S000001761 ORF Verified YKR053C YSR3 LBP2 chromosome 11 L000004404 11 534923 533709 C 2005-12-15 1996-07-31 Dihydrosphingosine 1-phosphate phosphatase, membrane protein involved in sphingolipid metabolism; has similarity to Lcb3p
S000034357 CDS YKR053C 11 534923 533709 C 2005-12-15 1996-07-31
S000001762 ORF Verified YKR054C DYN1 PAC6|DHC1 chromosome 11 L000000538 11 547567 535289 C 24.6 2005-12-15 1996-07-31 Cytoplasmic heavy chain dynein, microtubule motor protein, required for anaphase spindle elongation; involved in spindle assembly, chromosome movement, and spindle orientation during cell division, targeted to microtubule tips by Pac1p
S000035346 CDS YKR054C 11 547567 535289 C 2005-12-15 1996-07-31
S000001763 ORF Verified YKR055W RHO4 chromosome 11 L000001633 11 547858 548733 W 2005-12-15 1996-07-31 Non-essential small GTPase of the Rho/Rac subfamily of Ras-like proteins, likely to be involved in the establishment of cell polarity
S000035541 CDS YKR055W 11 547858 548733 W 2005-12-15 1996-07-31
S000001764 ORF Verified YKR056W TRM2 RNC1|NUD1|NUC2 chromosome 11 L000001652|L000001284 11 549090 551009 W 2005-12-15 2004-02-11|1996-07-31 tRNA methyltransferase, 5-methylates the uridine residue at position 54 of tRNAs and may also have a role in tRNA stabilization or maturation; endo-exonuclease with a role in DNA repair
S000035618 CDS YKR056W 11 549090 551009 W 2005-12-15 2004-02-11|1996-07-31
S000001765 ORF Verified YKR057W RPS21A RPS25 chromosome 11 L000001761 11 551299 551884 W 2005-12-15 1996-07-31 Protein component of the small (40S) ribosomal subunit; nearly identical to Rps21Bp and has similarity to rat S21 ribosomal protein
S000036538 CDS YKR057W 11 551299 551322 W 2005-12-15 1996-07-31
S000036539 CDS YKR057W 11 551645 551884 W 2005-12-15 1996-07-31
S000036540 intron YKR057W 11 551323 551644 W 2005-12-15 1996-07-31
S000001766 ORF Verified YKR058W GLG1 chromosome 11 L000002878 11 552412 554262 W 2005-12-15 1996-07-31|2005-12-01 Self-glucosylating initiator of glycogen synthesis, also glucosylates n-dodecyl-beta-D-maltoside; similar to mammalian glycogenin
S000036619 CDS YKR058W 11 552412 554262 W 2005-12-15 1996-07-31|2005-12-01
S000001767 ORF Verified YKR059W TIF1 chromosome 11 L000002302 11 554629 555816 W 22 2005-12-15 1996-07-31 Translation initiation factor eIF4A, identical to Tif2p; DEA(D/H)-box RNA helicase that couples ATPase activity to RNA binding and unwinding; forms a dumbbell structure of two compact domains connected by a linker; interacts with eIF4G
S000036719 CDS YKR059W 11 554629 555816 W 2005-12-15 1996-07-31
S000001768 ORF Verified YKR060W UTP30 chromosome 11 11 556160 556984 W 2005-12-15 1996-07-31 Subunit of U3-containing 90S preribosome complex involved in production of 18S rRNA and assembly of small ribosomal subunit
S000030161 CDS YKR060W 11 556160 556984 W 2005-12-15 1996-07-31
S000001769 ORF Verified YKR061W KTR2 chromosome 11 L000000925 11 557319 558596 W 2005-12-15 1996-07-31 Mannosyltransferase involved in N-linked protein glycosylation; member of the KRE2/MNT1 mannosyltransferase family
S000030356 CDS YKR061W 11 557319 558596 W 2005-12-15 1996-07-31
S000006502 snoRNA snR42 SNR42 chromosome 11 L000003409 11 559008 558658 C 2005-12-15 2000-05-19 H/ACA box small nucleolar RNA (snoRNA); guides pseudouridylation of large subunit (LSU) rRNA at position U2975
S000030613 noncoding_exon snR42 11 559008 558658 C 2005-12-15 2000-05-19
S000001770 ORF Verified YKR062W TFA2 chromosome 11 L000002596 11 559308 560294 W 2005-12-15 1996-07-31 TFIIE small subunit, involved in RNA polymerase II transcription initiation
S000030483 CDS YKR062W 11 559308 560294 W 2005-12-15 1996-07-31
S000001771 ORF Verified YKR063C LAS1 chromosome 11 L000000931 11 561939 560431 C 2005-12-15 1996-07-31 Essential nuclear protein possibly involved in bud formation and morphogenesis; mutants require the SSD1-v allele for viability
S000030551 CDS YKR063C 11 561939 560431 C 2005-12-15 1996-07-31
S000001772 ORF Verified YKR064W OAF3 chromosome 11 11 562189 564780 W 2005-12-15 1996-07-31 Zinc cluster protein; regulates transcription in response to oleate levels; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
S000031527 CDS YKR064W 11 562189 564780 W 2005-12-15 1996-07-31
S000001773 ORF Verified YKR065C PAM17 FMP18 chromosome 11 11 565534 564941 C 2005-12-15 1996-07-31 Constituent of the Translocase of the Inner Mitochondrial membrane (TIM23 complex); proposed alternatively to be a component of the import motor (PAM complex) or to interact with and modulate the core TIM23 complex
S000031607 CDS YKR065C 11 565534 564941 C 2005-12-15 1996-07-31
S000001774 ORF Verified YKR066C CCP1 chromosome 11 L000000238 11 566840 565755 C 2005-12-15 1996-07-31 Mitochondrial cytochrome-c peroxidase; degrades reactive oxygen species in mitochondria, involved in the response to oxidative stress
S000032588 CDS YKR066C 11 566840 565755 C 2005-12-15 1996-07-31
S000001775 ORF Verified YKR067W GPT2 GAT1 chromosome 11 11 567560 569791 W 2005-12-15 1996-07-31 Glycerol-3-phosphate/dihydroxyacetone phosphate dual substrate-specific sn-1 acyltransferase located in lipid particles and the ER; involved in the stepwise acylation of glycerol-3-phosphate and dihydroxyacetone in lipid biosynthesis
S000032727 CDS YKR067W 11 567560 569791 W 2005-12-15 1996-07-31
S000001776 ORF Verified YKR068C BET3 chromosome 11 L000004057 11 570551 569970 C 2005-12-15 1996-07-31 Hydrophilic protein that acts in conjunction with SNARE proteins in targeting and fusion of ER to Golgi transport vesicles; component of the TRAPP (transport protein particle) complex
S000032759 CDS YKR068C 11 570551 569970 C 2005-12-15 1996-07-31
S000001777 ORF Verified YKR069W MET1 MET20 chromosome 11 L000001089 11 571254 573035 W 2005-12-15 1996-07-31 S-adenosyl-L-methionine uroporphyrinogen III transmethylase, involved in the biosynthesis of siroheme, a prosthetic group used by sulfite reductase; required for sulfate assimilation and methionine biosynthesis
S000032921 CDS YKR069W 11 571254 573035 W 2005-12-15 1996-07-31
S000001778 ORF Uncharacterized YKR070W chromosome 11 11 573216 574274 W 2005-12-15 1996-07-31 Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
S000033052 CDS YKR070W 11 573216 574274 W 2005-12-15 1996-07-31
S000001779 ORF Verified YKR071C DRE2 chromosome 11 11 575622 574576 C 2005-12-15 1996-07-31 Protein that may prevent apoptosis by forming a complex with Tah18p in the absence of stress; required for iron-sulfur cluster assembly and sister chromatid cohesion; homolog of human anti-apoptotic protein Ciapin1
S000033101 CDS YKR071C 11 575622 574576 C 2005-12-15 1996-07-31
S000001780 ORF Verified YKR072C SIS2 HAL3 chromosome 11 L000001899 11 577765 576077 C 57 2005-12-15 1996-07-31 Negative regulatory subunit of protein phosphatase 1 Ppz1p and also a subunit of the phosphopantothenoylcysteine decarboxylase (PPCDC; Cab3p, Sis2p, Vhs3p) complex, which catalyzes the third step of coenzyme A biosynthesis
S000033861 CDS YKR072C 11 577765 576077 C 2005-12-15 1996-07-31
S000001781 ORF Dubious YKR073C chromosome 11 11 578149 577829 C 2005-12-15 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000033995 CDS YKR073C 11 578149 577829 C 2005-12-15 1996-07-31
S000006632 tRNA tK(UUU)K chromosome 11 L000003638 11 578607 578702 W 2005-12-15 2000-05-19 tRNA-Lys; thiolation of uridine at wobble position (34) requires Ncs6p
S000034204 intron tK(UUU)K 11 578644 578666 W 2005-12-15 2000-05-19
S000034202 noncoding_exon tK(UUU)K 11 578607 578643 W 2005-12-15 2000-05-19
S000034203 noncoding_exon tK(UUU)K 11 578667 578702 W 2005-12-15 2000-05-19
S000001782 ORF Verified YKR074W AIM29 chromosome 11 11 578851 579318 W 2005-12-15 1996-07-31 Putative protein of unknown function; epitope-tagged protein localizes to the cytoplasm; YKR074W is not an essential gene; null mutant displays elevated frequency of mitochondrial genome loss
S000034957 CDS YKR074W 11 578851 579318 W 2005-12-15 1996-07-31
S000028669 ORF Dubious YKR075W-A chromosome 11 11 579854 580123 W 2005-12-15 2003-07-29 Dubious open reading frame unlikely to encode a protein; completely overlaps the uncharacterized gene YKR075W; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching
S000032494 CDS YKR075W-A 11 579854 580123 W 2005-12-15 2003-07-29
S000001783 ORF Uncharacterized YKR075C chromosome 11 11 580392 579469 C 2005-12-15 1996-07-31 Protein of unknown function; similar to YOR062Cp and Reg1p; expression regulated by glucose and Rgt1p; GFP-fusion protein is induced in response to the DNA-damaging agent MMS
S000035052 CDS YKR075C 11 580392 579469 C 2005-12-15 1996-07-31
S000118408 ARS ARS1118 ARSXI-582 chromosome 11 11 581475 581712 2006-08-30 2006-08-30 Autonomously Replicating Sequence
S000001784 ORF Verified YKR076W ECM4 GTO2 chromosome 11 L000003880 11 581925 583037 W 2005-12-15 1996-07-31 Omega class glutathione transferase; not essential; similar to Ygr154cp; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm
S000035311 CDS YKR076W 11 581925 583037 W 2005-12-15 1996-07-31
S000001785 ORF Verified YKR077W MSA2 chromosome 11 11 583295 584386 W 2005-12-15 1996-07-31 Putative transcriptional activator, that interacts with G1-specific transcription factor, MBF and G1-specific promoters; ortholog of Msa2p, an MBF and SBF activator that regulates G1-specific transcription and cell cycle initiation
S000036232 CDS YKR077W 11 583295 584386 W 2005-12-15 1996-07-31
S000001786 ORF Verified YKR078W chromosome 11 11 584594 586351 W 2005-12-15 1996-07-31 Cytoplasmic protein of unknown function, has similarity to Vps5p; potential Cdc28p substrate; contains a Phox homology (PX) domain and specifically binds phosphatidylinositol 3-phosphate (PtdIns-3-P)
S000036335 CDS YKR078W 11 584594 586351 W 2005-12-15 1996-07-31
S000001787 ORF Verified YKR079C TRZ1 chromosome 11 11 588947 586431 C 2005-12-15 1996-07-31 tRNA 3'-end processing endonuclease tRNase Z; also localized to mitochondria and interacts genetically with Rex2 exonuclease; homolog of the human candidate prostate cancer susceptibility gene ELAC2
S000036383 CDS YKR079C 11 588947 586431 C 2005-12-15 1996-07-31
S000001788 ORF Verified YKR080W MTD1 chromosome 11 L000001210 11 590037 590999 W 2005-12-15 1996-07-31 NAD-dependent 5,10-methylenetetrahydrafolate dehydrogenase, plays a catalytic role in oxidation of cytoplasmic one-carbon units; expression is regulated by Bas1p and Bas2p, repressed by adenine, and may be induced by inositol and choline
S000029910 CDS YKR080W 11 590037 590999 W 2005-12-15 1996-07-31
S000001789 ORF Verified YKR081C RPF2 chromosome 11 11 592182 591148 C 2005-12-15 1996-07-31 Essential protein involved in the processing of pre-rRNA and the assembly of the 60S ribosomal subunit; interacts with ribosomal protein L11; localizes predominantly to the nucleolus; constituent of 66S pre-ribosomal particles
S000029955 CDS YKR081C 11 592182 591148 C 2005-12-15 1996-07-31
S000001790 ORF Verified YKR082W NUP133 RAT3 chromosome 11 L000002620 11 592467 595940 W 2005-12-15 1996-07-31 Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), localizes to both sides of the NPC, required to establish a normal nucleocytoplasmic concentration gradient of the GTPase Gsp1p
S000030187 CDS YKR082W 11 592467 595940 W 2005-12-15 1996-07-31
S000001791 ORF Verified YKR083C DAD2 HSK1 chromosome 11 11 596464 596063 C 2005-12-15 1996-07-31 Essential subunit of the Dam1 complex (aka DASH complex), couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; is transferred to the kinetochore prior to mitosis
S000031089 CDS YKR083C 11 596464 596063 C 2005-12-15 1996-07-31
S000001792 ORF Verified YKR084C HBS1 chromosome 11 L000000756 11 598532 596697 C 2005-12-15 1996-07-31 GTP binding protein with sequence similarity to the elongation factor class of G proteins, EF-1alpha and Sup35p; associates with Dom34p, and shares a similar genetic relationship with genes that encode ribosomal protein components
S000031204 CDS YKR084C 11 598532 596697 C 2005-12-15 1996-07-31
S000001793 ORF Verified YKR085C MRPL20 chromosome 11 L000002527|L000001166 11 599323 598736 C 2005-12-15 1996-07-31 Mitochondrial ribosomal protein of the large subunit
S000031317 CDS YKR085C 11 599323 598736 C 2005-12-15 1996-07-31
S000001794 ORF Verified YKR086W PRP16 PRP23|RNA16 chromosome 11 L000001504 11 599499 602714 W 2005-12-15 1996-07-31 RNA helicase in the DEAH-box family involved in the second catalytic step of splicing, exhibits ATP-dependent RNA unwinding activity
S000032379 CDS YKR086W 11 599499 602714 W 2005-12-15 1996-07-31
S000001795 ORF Verified YKR087C OMA1 chromosome 11 11 603874 602837 C 2005-12-15 2004-07-23|1996-07-31 Metalloendopeptidase of the mitochondrial inner membrane, involved in turnover of membrane-embedded proteins; member of a family of predicted membrane-bound metallopeptidases in prokaryotes and higher eukaryotes
S000032444 CDS YKR087C 11 603874 602837 C 2005-12-15 2004-07-23|1996-07-31
S000001796 ORF Verified YKR088C TVP38 chromosome 11 11 605060 604047 C 2005-12-15 1996-07-31 Integral membrane protein localized to late Golgi vesicles along with the v-SNARE Tlg2p; required for asymmetric localization of Kar9p during mitosis; GFP-fusion protein localizes to the cytoplasm in a punctate pattern
S000032545 CDS YKR088C 11 605060 604047 C 2005-12-15 1996-07-31
S000001797 ORF Verified YKR089C TGL4 STC1 chromosome 11 11 608007 605275 C 2005-12-15 1996-07-31 Triacylglycerol lipase involved in triacylglycerol mobilization and degradation; found in lipid particles; phosphorylated and activated by Cdc28p; required with Tgl3p for timely bud formation
S000032624 CDS YKR089C 11 608007 605275 C 2005-12-15 1996-07-31
S000001798 ORF Verified YKR090W PXL1 chromosome 11 11 608588 610708 W 2005-12-15 1996-07-31 LIM domain-containing protein that localizes to sites of polarized growth, required for selection and/or maintenance of polarized growth sites, may modulate signaling by the GTPases Cdc42p and Rho1p; has similarity to metazoan paxillin
S000033373 CDS YKR090W 11 608588 610708 W 2005-12-15 1996-07-31
S000001799 ORF Verified YKR091W SRL3 chromosome 11 L000004671 11 611167 611907 W 2005-12-15 2004-07-23|1996-07-31 Cytoplasmic protein that, when overexpressed, suppresses the lethality of a rad53 null mutation; potential Cdc28p substrate
S000034294 CDS YKR091W 11 611167 611907 W 2005-12-15 2004-07-23|1996-07-31
S000118409 ARS ARS1120 ARSXI-612 chromosome 11 11 611883 612115 2006-08-30 2006-08-30 Autonomously Replicating Sequence
S000001800 ORF Verified YKR092C SRP40 chromosome 11 L000002063 11 613527 612307 C 2005-12-15 1996-07-31 Nucleolar, serine-rich protein with a role in preribosome assembly or transport; may function as a chaperone of small nucleolar ribonucleoprotein particles (snoRNPs); immunologically and structurally to rat Nopp140
S000034345 CDS YKR092C 11 613527 612307 C 2005-12-15 1996-07-31
S000001801 ORF Verified YKR093W PTR2 chromosome 11 L000001527 11 615372 617177 W 2005-12-15 1996-07-31 Integral membrane peptide transporter, mediates transport of di- and tri-peptides; conserved protein that contains 12 transmembrane domains; PTR2 expression is regulated by the N-end rule pathway via repression by Cup9p
S000034474 CDS YKR093W 11 615372 617177 W 2005-12-15 1996-07-31
S000001802 ORF Verified YKR094C RPL40B UB12|CEP52B|UBI2 chromosome 11 L000002412|L000000314 11 618392 617638 C 2005-12-15 1996-07-31 Fusion protein, identical to Rpl40Ap, that is cleaved to yield ubiquitin and a ribosomal protein of the large (60S) ribosomal subunit with similarity to rat L40; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes
S000034523 CDS YKR094C 11 618016 617638 C 2005-12-15 1996-07-31
S000034522 CDS YKR094C 11 618392 618385 C 2005-12-15 1996-07-31
S000034524 intron YKR094C 11 618384 618017 C 2005-12-15 1996-07-31
S000001803 ORF Verified YKR095W MLP1 MPL1 chromosome 11 L000001141|L000001122 11 619447 625074 W 80.3 2005-12-15 1996-07-31 Myosin-like protein associated with the nuclear envelope, connects the nuclear pore complex with the nuclear interior; involved with Tel1p in telomere length control; involved with Pml1p and Pml39p in nuclear retention of unspliced mRNAs
S000035599 CDS YKR095W 11 619447 625074 W 2005-12-15 1996-07-31
S000028512 ORF Verified YKR095W-A PCC1 chromosome 11 11 625506 625847 W 2005-12-15 2004-01-28|2003-07-29 Proposed transcription factor involved in the expression of genes regulated by alpha-factor and galactose; component of the EKC/KEOPS protein complex with Kae1p, Gon7p, Bud32p, and Cgi121p; related to human cancer-testis antigens
S000030270 CDS YKR095W-A 11 625506 625543 W 2005-12-15 2004-01-28|2003-07-29
S000030272 CDS YKR095W-A 11 625619 625847 W 2005-12-15 2004-01-28
S000030273 intron YKR095W-A 11 625544 625618 W 2005-12-15 2004-01-28|2003-07-29
S000001804 ORF Verified YKR096W chromosome 11 11 626435 630022 W 2005-12-15 1996-07-31 Protein of unknown function that may interact with ribosomes, based on co-purification experiments; green fluorescent protein (GFP)-fusion protein localizes to the nucleus and cytoplasm; predicted to contain a PINc domain
S000035688 CDS YKR096W 11 626435 630022 W 2005-12-15 1996-07-31
S000001805 ORF Verified YKR097W PCK1 PPC1|JPM2 chromosome 11 L000001350 11 630790 632439 W 73.2 2005-12-15 1996-07-31 Phosphoenolpyruvate carboxykinase, key enzyme in gluconeogenesis, catalyzes early reaction in carbohydrate biosynthesis, glucose represses transcription and accelerates mRNA degradation, regulated by Mcm1p and Cat8p, located in the cytosol
S000036623 CDS YKR097W 11 630790 632439 W 2005-12-15 1996-07-31
S000001806 ORF Verified YKR098C UBP11 chromosome 11 L000003171 11 634817 632664 C 2005-12-15 1996-07-31 Ubiquitin-specific protease that cleaves ubiquitin from ubiquitinated proteins
S000036658 CDS YKR098C 11 634817 632664 C 2005-12-15 1996-07-31
S000001807 ORF Verified YKR099W BAS1 chromosome 11 L000000161 11 635489 637924 W 82 2005-12-15 1996-07-31 Myb-related transcription factor involved in regulating basal and induced expression of genes of the purine and histidine biosynthesis pathways; also involved in regulation of meiotic recombination at specific genes
S000036756 CDS YKR099W 11 635489 637924 W 2005-12-15 1996-07-31
S000001808 ORF Verified YKR100C SKG1 YKR099C-A chromosome 11 11 639606 638539 C 2005-12-15 2004-02-11|1996-07-31 Transmembrane protein with a role in cell wall polymer composition; localizes on the inner surface of the plasma membrane at the bud and in the daughter cell
S000033006 CDS YKR100C 11 639606 638539 C 2005-12-15 2004-02-11|1996-07-31
S000001809 ORF Verified YKR101W SIR1 chromosome 11 L000001894 11 640178 642142 W 84 2009-02-20 1996-07-31|2009-02-20 Protein involved in repression of transcription at the silent mating-type loci HML and HMR; recruitment to silent chromatin requires interactions with Orc1p and with Sir4p, through a common Sir1p domain; binds to centromeric chromatin
S000033721 CDS YKR101W 11 640178 642142 W 2009-02-20 1996-07-31|2009-02-20
S000118410 ARS ARS1123 ARSXI-642 chromosome 11 11 642365 642611 2006-08-30 2006-08-30 Autonomously Replicating Sequence
S000001810 ORF Verified YKR102W FLO10 chromosome 11 L000004081 11 645994 649503 W 2005-12-15 1996-07-31 Lectin-like protein with similarity to Flo1p, thought to be involved in flocculation
S000033847 CDS YKR102W 11 645994 649503 W 2005-12-15 1996-07-31
S000001811 ORF Verified YKR103W NFT1 chromosome 11 11 652718 656374 W 2005-12-15 1996-07-31 Putative transporter of the multidrug resistance-associated protein (MRP) subfamily; adjacent ORFs YKR103W and YKR104W are merged in different strain backgrounds.
S000033929 CDS YKR103W 11 652718 656374 W 2005-12-15 1996-07-31
S000001812 ORF Verified YKR104W NFT1 chromosome 11 11 656474 657394 W 2005-12-15 1996-07-31 Putative transporter of the multidrug resistance-associated protein (MRP) subfamily; contains a stop codon in S288C; adjacent ORFs YKR103W and YKR104W are merged in different strain backgrounds
S000034837 CDS YKR104W 11 656474 657394 W 2005-12-15 1996-07-31
S000001813 ORF Uncharacterized YKR105C VBA5 chromosome 11 11 660102 658354 C 2005-12-15 1996-07-31 Putative transporter of the Major Facilitator Superfamily (MFS); proposed role as a basic amino acid permease based on phylogeny
S000034879 CDS YKR105C 11 660102 658354 C 2005-12-15 1996-07-31
S000001814 ORF Uncharacterized YKR106W chromosome 11 11 661080 662927 W 2005-12-15 1996-07-31 Protein of unconfirmed function; displays a topology characteristic of the Major Facilitators Superfamily of membrane proteins; coding sequence 98% identical to that of YCL073C
S000035177 CDS YKR106W 11 661080 662927 W 2005-12-15 1996-07-31
S000007063 long_terminal_repeat YKRWomega1 chromosome 11 11 665068 665306 W 2005-12-15 2000-05-19 Ty5 LTR
S000028978 telomere TEL11R chromosome 11 11 665542 666454 W 89 2005-12-15 2003-09-09 Telomeric region on the right arm of Chromosome XI, composed of an X element core sequence, X element combinatorial repeats, and a terminal stretch of telomeric repeats
S000028980 X_element_core_sequence TEL11R-XC chromosome 11 11 665542 666002 W 2005-12-15 2003-09-09 Telomeric X element Core sequence on the right arm of Chromosome XI, contains an ARS consensus sequence and an Abf1p binding site consensus sequence
S000035881 ARS consensus sequence TEL11R-XC 11 665580 665590 W 2005-12-15 2003-09-09
S000035882 binding_site TEL11R-XC 11 665799 665811 W 2005-12-15 2003-09-09
S000028981 X_element_combinatorial_repeats TEL11R-XR chromosome 11 11 666003 666246 W 2005-12-15 2003-09-09 Telomeric X element combinatorial Repeat region on the right arm of Chromosome XI; contains repeats of the D, C, B and A types, as well as Tbf1p binding sites; formerly called SubTelomeric Repeats
S000028979 telomeric_repeat TEL11R-TR chromosome 11 11 666247 666454 W 2005-12-15 2003-09-09 Terminal stretch of telomeric repeats on the right arm of Chromosome XI
S000028911 telomeric_repeat TEL12L-TR1 chromosome 12 12 75 1 C 2003-09-09 2003-09-09 Terminal stretch of telomeric repeats on the left arm of Chromosome XII
S000028673 ORF Dubious YLL067W-A chromosome 12 12 843 1325 W 2003-07-29 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps YLL067C
S000032519 CDS YLL067W-A 12 843 1325 W 2003-07-29 2003-07-29
S000003990 ORF Uncharacterized YLL067C chromosome 12 12 4301 585 C 1996-07-31 1996-07-31 Putative protein of unknown function with similarity to helicases
S000034997 CDS YLL067C 12 3915 585 C 1996-07-31 1996-07-31
S000034996 CDS YLL067C 12 4301 4015 C 1996-07-31 1996-07-31
S000034998 intron YLL067C 12 4014 3916 C 1996-07-31 1996-07-31
S000028672 ORF Uncharacterized YLL066W-B chromosome 12 12 5605 5775 W 2003-07-29 2003-07-29 Putative protein of unknown function; overexpression causes a cell cycle delay or arrest
S000032518 CDS YLL066W-B 12 5605 5775 W 2003-07-29 2003-07-29
S000028916 Y'_element TEL12L-YP1 chromosome 12 12 5661 76 C 2003-09-09 2003-09-09 More end-proximal of two short telomeric Y' elements on the left arm of Chromosome XII; contains an ARS consensus sequence, a region of 36-bp repeats, and two ORFs YLL067C and YLL067W-A
S000034778 ARS consensus sequence TEL12L-YP1 12 284 294 W 2003-09-09 2003-09-09
S000034779 repeat_region TEL12L-YP1 12 1681 2215 W 2003-09-09 2003-09-09
S000028912 telomeric_repeat TEL12L-TR2 chromosome 12 12 5723 5662 C 2003-09-09 2003-09-09 Middle stretch of telomeric repeats on the left arm of Chromosome XII
S000028671 ORF Dubious YLL066W-A chromosome 12 12 6486 6968 W 2003-07-29 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized ORF YLL066C
S000032517 CDS YLL066W-A 12 6486 6968 W 2003-07-29 2003-07-29
S000003989 ORF Uncharacterized YLL066C chromosome 12 12 9836 6120 C 1996-07-31 1996-07-31 Putative protein of unknown function with similarity to helicases; YLL066C is not an essential gene
S000034882 CDS YLL066C 12 9450 6120 C 1996-07-31 1996-07-31
S000034881 CDS YLL066C 12 9836 9550 C 1996-07-31 1996-07-31
S000034883 intron YLL066C 12 9549 9451 C 1996-07-31 1996-07-31
S000028917 Y'_element TEL12L-YP2 chromosome 12 12 11196 5724 C 2003-09-09 2003-09-09 More centromere-proximal of two short Y' elements in the left telomere of Chromosome XII; contains an ARS consensus sequence, a region of 36-bp repeats, and two ORFs YLL066C and YLL066W-A
S000034782 ARS consensus sequence TEL12L-YP2 12 5921 5931 W 2003-09-09 2003-09-09
S000034783 repeat_region TEL12L-YP2 12 7324 7750 W 2003-09-09 2003-09-09
S000028913 telomeric_repeat TEL12L-TR3 chromosome 12 12 11358 11197 C 2003-09-09 2003-09-09 Internal stretch of telomeric repeats on the left arm of Chromosome XII
S000028915 X_element_combinatorial_repeats TEL12L-XR chromosome 12 12 11625 11359 C 2003-09-09 2003-09-09 Telomeric X element combinatorial Repeat region on the left arm of Chromosome XII; contains repeats of the D, C, B and A types, as well as Tbf1p binding sites; formerly called SubTelomeric Repeats
S000003988 ORF Dubious YLL065W GIN11 chromosome 12 L000002674 12 11726 12076 W 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps chromosome XII telomeric element core sequences
S000034819 CDS YLL065W 12 11726 12076 W 1996-07-31 1996-07-31
S000028910 telomere TEL12L chromosome 12 12 12085 1 C -33 2003-09-09 2003-09-09 Telomeric region on the left arm of Chromosome XII, composed of an X element core sequence, X element combinatorial repeats, and three distinct regions of telomeric repeats separated by two short Y' elements
S000028914 X_element_core_sequence TEL12L-XC chromosome 12 12 12085 11626 C 2003-09-09 2003-09-09 Telomeric X element Core sequence on the left arm of Chromosome XII; contains an ARS consensus sequence, an Abf1p binding site consensus sequence, and ORF YLL065W
S000034774 ARS consensus sequence TEL12L-XC 12 12047 12037 C 2003-09-09 2003-09-09
S000034775 binding_site TEL12L-XC 12 11828 11816 C 2003-09-09 2003-09-09
S000003987 ORF Verified YLL064C PAU18 chromosome 12 12 13445 13083 C 1996-07-31 1996-07-31 Protein of unknown function, member of the seripauperin multigene family encoded mainly in subtelomeric regions; identical to Pau6p
S000034617 CDS YLL064C 12 13445 13083 C 1996-07-31 1996-07-31
S000003986 ORF Verified YLL063C AYT1 chromosome 12 L000004544 12 16072 14648 C 1996-07-31 1996-07-31 Acetyltransferase; catalyzes trichothecene 3-O-acetylation, suggesting a possible role in trichothecene biosynthesis
S000033720 CDS YLL063C 12 16072 14648 C 1996-07-31 1996-07-31
S000003985 ORF Verified YLL062C MHT1 chromosome 12 12 17613 16639 C 1996-07-31 1996-07-31 S-methylmethionine-homocysteine methyltransferase, functions along with Sam4p in the conversion of S-adenosylmethionine (AdoMet) to methionine to control the methionine/AdoMet ratio
S000033626 CDS YLL062C 12 17613 16639 C 1996-07-31 1996-07-31
S000003984 ORF Verified YLL061W MMP1 chromosome 12 L000004869 12 17956 19707 W 1996-07-31 1996-07-31 High-affinity S-methylmethionine permease, required for utilization of S-methylmethionine as a sulfur source; has similarity to S-adenosylmethionine permease Sam3p
S000033583 CDS YLL061W 12 17956 19707 W 1996-07-31 1996-07-31
S000003983 ORF Verified YLL060C GTT2 chromosome 12 L000004613 12 21839 21138 C 1996-07-31 1996-07-31 Glutathione S-transferase capable of homodimerization; functional overlap with Gtt2p, Grx1p, and Grx2p
S000032819 CDS YLL060C 12 21839 21138 C 1996-07-31 1996-07-31
S000003982 ORF Dubious YLL059C chromosome 12 12 22980 22474 C 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000032747 CDS YLL059C 12 22980 22474 C 1996-07-31 1996-07-31
S000003981 ORF Uncharacterized YLL058W chromosome 12 12 23569 25296 W 1996-07-31 1996-07-31 Putative protein of unknown function with similarity to Str2p, which is a cystathionine gamma-synthase important in sulfur metabolism; YLL058W is not an essential gene
S000031898 CDS YLL058W 12 23569 25296 W 1996-07-31 1996-07-31
S000003980 ORF Verified YLL057C JLP1 chromosome 12 12 26994 25756 C 1996-07-31 1996-07-31 Fe(II)-dependent sulfonate/alpha-ketoglutarate dioxygenase, involved in sulfonate catabolism for use as a sulfur source; contains sequence that resembles a J domain (typified by the E. coli DnaJ protein); induced by sulphur starvation
S000031705 CDS YLL057C 12 26994 25756 C 1996-07-31 1996-07-31
S000003979 ORF Uncharacterized YLL056C chromosome 12 12 28305 27409 C 1996-07-31 1996-07-31 Putative protein of unknown function, transcription is activated by paralogous transcription factors Yrm1p and Yrr1p and genes involved in pleiotropic drug resistance (PDR); expression is induced in cells treated with the mycotoxin patulin
S000031618 CDS YLL056C 12 28305 27409 C 1996-07-31 1996-07-31
S000003978 ORF Verified YLL055W YCT1 chromosome 12 12 30109 31704 W 1996-07-31 1996-07-31 High-affinity cysteine-specific transporter with similarity to the Dal5p family of transporters; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; YCT1 is not an essential gene
S000031573 CDS YLL055W 12 30109 31704 W 1996-07-31 1996-07-31
S000130180 ARS ARS1202 chromosome 12 12 30209 31384 2009-05-08 2009-05-08 Putative replication origin, identified in multiple array studies, not yet confirmed by plasmid-based assay
S000003977 ORF Uncharacterized YLL054C chromosome 12 12 35203 32894 C 1996-07-31 1996-07-31 Putative protein of unknown function with similarity to Pip2p, an oleate-specific transcriptional activator of peroxisome proliferation; YLL054C is not an essential gene
S000030665 CDS YLL054C 12 35203 32894 C 1996-07-31 1996-07-31
S000003976 ORF Uncharacterized YLL053C chromosome 12 12 35960 35502 C 1996-07-31 1996-07-31 Putative protein; in the Sigma 1278B strain background YLL053C is contiguous with AQY2 which encodes an aquaporin
S000030554 CDS YLL053C 12 35960 35502 C 1996-07-31 1996-07-31
S000003975 ORF Verified YLL052C AQY2 chromosome 12 L000004844 12 36360 35911 C 1996-07-31 1996-07-31 Water channel that mediates the transport of water across cell membranes, only expressed in proliferating cells, controlled by osmotic signals, may be involved in freeze tolerance; disrupted by a stop codon in many S. cerevisiae strains
S000030412 CDS YLL052C 12 36360 35911 C 1996-07-31 1996-07-31
S000003974 ORF Verified YLL051C FRE6 chromosome 12 L000003558 12 39470 37332 C 1996-07-31 1996-07-31 Putative ferric reductase with similarity to Fre2p; expression induced by low iron levels
S000037644 CDS YLL051C 12 39470 37332 C 1996-07-31 1996-07-31
S000003973 ORF Verified YLL050C COF1 chromosome 12 L000000377 12 40413 39803 C 1996-07-31 1996-07-31 Cofilin, promotes actin filament depolarization in a pH-dependent manner; binds both actin monomers and filaments and severs filaments; thought to be regulated by phosphorylation at SER4; ubiquitous and essential in eukaryotes
S000037511 CDS YLL050C 12 40220 39803 C 1996-07-31 1996-07-31
S000037510 CDS YLL050C 12 40413 40400 C 1996-07-31 1996-07-31
S000037512 intron YLL050C 12 40399 40221 C 1996-07-31 1996-07-31
S000003972 ORF Verified YLL049W LDB18 chromosome 12 12 40665 41204 W 1996-07-31 1996-07-31 Protein of unknown function; required for nuclear migration; null mutant shows a reduced affinity for the alcian blue dye suggesting a decreased net negative charge of the cell surface
S000037568 CDS YLL049W 12 40665 41204 W 1996-07-31 1996-07-31
S000003971 ORF Verified YLL048C YBT1 BAT1 chromosome 12 L000004345 12 46264 41279 C 1996-07-31 1996-07-31 Transporter of the ATP-binding cassette (ABC) family involved in bile acid transport; similar to mammalian bile transporters
S000036801 CDS YLL048C 12 46264 41279 C 1996-07-31 1996-07-31
S000003970 ORF Dubious YLL047W chromosome 12 12 46671 47054 W 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps verified gene RNP1
S000036777 CDS YLL047W 12 46671 47054 W 1996-07-31 1996-07-31
S000003969 ORF Verified YLL046C RNP1 chromosome 12 L000001654 12 47462 46713 C 1996-07-31 1996-07-31 Ribonucleoprotein that contains two RNA recognition motifs (RRM)
S000036697 CDS YLL046C 12 47462 46713 C 1996-07-31 1996-07-31
S000003967 ORF Dubious YLL044W chromosome 12 12 48215 48661 W 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; transcription of both YLL044W and the overlapping gene RPL8B is reduced in the gcr1 null mutant
S000035737 CDS YLL044W 12 48215 48661 W 1996-07-31 1996-07-31
S000003968 ORF Verified YLL045C RPL8B SCL41|KRB1 chromosome 12 L000000911|L000001705 12 48628 47858 C 1996-07-31 1996-07-31 Ribosomal protein L4 of the large (60S) ribosomal subunit, nearly identical to Rpl8Ap and has similarity to rat L7a ribosomal protein; mutation results in decreased amounts of free 60S subunits
S000036622 CDS YLL045C 12 48628 47858 C 1996-07-31 1996-07-31
S000003966 ORF Verified YLL043W FPS1 chromosome 12 L000000625 12 49937 51946 W 1996-07-31 1996-07-31 Plasma membrane channel, member of major intrinsic protein (MIP) family; involved in efflux of glycerol and in uptake of acetic acid and the trivalent metalloids arsenite and antimonite; phosphorylated by Hog1p MAPK under acetate stress
S000035628 CDS YLL043W 12 49937 51946 W 1996-07-31 1996-07-31
S000003965 ORF Verified YLL042C ATG10 APG10 chromosome 12 L000004785 12 52589 52086 C 1996-07-31 1996-07-31 Conserved E2-like conjugating enzyme that mediates formation of the Atg12p-Atg5p conjugate, which is a critical step in autophagy
S000035508 CDS YLL042C 12 52589 52086 C 1996-07-31 1996-07-31
S000003964 ORF Verified YLL041C SDH2 SDHB|ACN17 chromosome 12 L000001824 12 53930 53130 C 1996-07-31 1996-07-31 Iron-sulfur protein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p), which couples the oxidation of succinate to the transfer of electrons to ubiquinone
S000034473 CDS YLL041C 12 53930 53130 C 1996-07-31 1996-07-31
S000003963 ORF Verified YLL040C VPS13 VPT2|SOI1 chromosome 12 L000003510|L000002967 12 63644 54210 C 1996-07-31 1996-07-31 Protein of unknown function; heterooligomeric or homooligomeric complex; peripherally associated with membranes; homologous to human COH1; involved in sporulation, vacuolar protein sorting and protein-Golgi retention
S000034394 CDS YLL040C 12 63644 54210 C 1996-07-31 1996-07-31
S000003962 ORF Verified YLL039C UBI4 UB14|SCD2 chromosome 12 L000002414 12 65206 64061 C 1996-07-31 1996-07-31 Ubiquitin, becomes conjugated to proteins, marking them for selective degradation via the ubiquitin-26S proteasome system; essential for the cellular stress response; encoded as a polyubiquitin precursor comprised of 5 head-to-tail repeats
S000033435 CDS YLL039C 12 65206 64061 C 1996-07-31 1996-07-31
S000003961 ORF Verified YLL038C ENT4 chromosome 12 12 66517 65774 C 1996-07-31 1996-07-31 Protein of unknown function, contains an N-terminal epsin-like domain; proposed to be involved in the trafficking of Arn1p in the absence of ferrichrome
S000033366 CDS YLL038C 12 66517 65774 C 1996-07-31 1996-07-31
S000003960 ORF Dubious YLL037W chromosome 12 12 66561 66941 W 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a functional protein; overlaps 3' end of essential PRP19 gene encoding an RNA splicing factor
S000033343 CDS YLL037W 12 66561 66941 W 1996-07-31 1996-07-31
S000003959 ORF Verified YLL036C PRP19 PSO4 chromosome 12 L000001506 12 68255 66744 C 1996-07-31 1996-07-31 Splicing factor associated with the spliceosome; contains a U-box, a motif found in a class of ubiquitin ligases
S000032580 CDS YLL036C 12 68255 66744 C 1996-07-31 1996-07-31
S000003958 ORF Verified YLL035W GRC3 chromosome 12 12 68579 70477 W 1996-07-31 1996-07-31 Protein of unknown function, required for cell growth and possibly involved in rRNA processing; mRNA is cell cycle regulated
S000032549 CDS YLL035W 12 68579 70477 W 1996-07-31 1996-07-31
S000003957 ORF Verified YLL034C RIX7 chromosome 12 12 73145 70632 C 1996-07-31 1996-07-31 Putative ATPase of the AAA family, required for export of pre-ribosomal large subunits from the nucleus; distributed between the nucleolus, nucleoplasm, and nuclear periphery depending on growth conditions
S000032376 CDS YLL034C 12 73145 70632 C 1996-07-31 1996-07-31
S000003956 ORF Verified YLL033W IRC19 RRG4|GON2 chromosome 12 12 73408 74100 W 1996-07-31 1996-07-31 Putative protein of unknown function; YLL033W is not an essential gene but mutant is defective in spore formation; null mutant displays increased levels of spontaneous Rad52p foci
S000032327 CDS YLL033W 12 73408 74100 W 1996-07-31 1996-07-31
S000003955 ORF Verified YLL032C chromosome 12 12 76746 74269 C 1996-07-31 1996-07-31 Protein of unknown function that may interact with ribosomes, based on co-purification experiments; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLL032C is not an essential gene
S000031283 CDS YLL032C 12 76746 74269 C 1996-07-31 1996-07-31
S000003954 ORF Verified YLL031C GPI13 MPC1 chromosome 12 12 80204 77151 C 1996-07-31 1996-07-31 ER membrane localized phosphoryltransferase that adds phosphoethanolamine onto the third mannose residue of the glycosylphosphatidylinositol (GPI) anchor precursor; similar to human PIG-O protein
S000031131 CDS YLL031C 12 80204 77151 C 1996-07-31 1996-07-31
S000003953 ORF Dubious YLL030C RRT7 chromosome 12 12 80696 80355 C 1996-07-31 1996-07-31 Identified in a screen for mutants with increased levels of rDNA transcription; dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000030186 CDS YLL030C 12 80696 80355 C 1996-07-31 1996-07-31
S000003952 ORF Verified YLL029W FRA1 RUP2 chromosome 12 12 81460 83709 W 1996-07-31 1996-07-31 Protein involved in negative regulation of transcription of iron regulon; forms an iron independent complex with Fra2p, Grx3p, and Grx4p; cytosolic; mutant fails to repress transcription of iron regulon and is defective in spore formation
S000037209 CDS YLL029W 12 81460 83709 W 1996-07-31 1996-07-31
S000003951 ORF Verified YLL028W TPO1 chromosome 12 12 84803 86563 W 1996-07-31 1996-07-31 Polyamine transporter that recognizes spermine, putrescine, and spermidine; catalyzes uptake of polyamines at alkaline pH and excretion at acidic pH; phosphorylation enhances activity and sorting to the plasma membrane
S000037134 CDS YLL028W 12 84803 86563 W 1996-07-31 1996-07-31
S000003950 ORF Verified YLL027W ISA1 chromosome 12 L000004953 12 87402 88154 W 1996-07-31 1996-07-31 Mitochondrial matrix protein involved in biogenesis of the iron-sulfur (Fe/S) cluster of Fe/S proteins, isa1 deletion causes loss of mitochondrial DNA and respiratory deficiency; depletion reduces growth on nonfermentable carbon sources
S000036472 CDS YLL027W 12 87402 88154 W 1996-07-31 1996-07-31
S000003949 ORF Verified YLL026W HSP104 chromosome 12 L000000823 12 88622 91348 W 1996-07-31 1996-07-31 Heat shock protein that cooperates with Ydj1p (Hsp40) and Ssa1p (Hsp70) to refold and reactivate previously denatured, aggregated proteins; responsive to stresses including: heat, ethanol, and sodium arsenite; involved in [PSI+] propagation
S000036386 CDS YLL026W 12 88622 91348 W 1996-07-31 1996-07-31
S000118469 ARS ARS1206 ARSXII-91 chromosome 12 12 91418 91659 2006-08-30 2006-08-30 Autonomously Replicating Sequence
S000007064 long_terminal_repeat YLLCdelta1 chromosome 12 12 92380 92049 C 2000-05-19 2000-05-19 Ty1 LTR
S000006683 tRNA tP(UGG)L chromosome 12 L000003645 12 92547 92649 W 2000-05-19 2000-05-19 tRNA-Pro; target of K. lactis zymocin
S000036013 intron tP(UGG)L 12 92583 92613 W 2000-05-19 2000-05-19
S000036011 noncoding_exon tP(UGG)L 12 92547 92582 W 2000-05-19 2000-05-19
S000036012 noncoding_exon tP(UGG)L 12 92614 92649 W 2000-05-19 2000-05-19
S000003948 ORF Verified YLL025W PAU17 chromosome 12 12 94746 95120 W 1996-07-31 1996-07-31 Protein of unknown function, member of the seripauperin multigene family encoded mainly in subtelomeric regions; YLL025W is not an essential gene
S000036278 CDS YLL025W 12 94746 95120 W 1996-07-31 1996-07-31
S000003947 ORF Verified YLL024C SSA2 YG102 chromosome 12 L000002070 12 97484 95565 C 1996-07-31 1996-07-31 ATP binding protein involved in protein folding and vacuolar import of proteins; member of heat shock protein 70 (HSP70) family; associated with the chaperonin-containing T-complex; present in the cytoplasm, vacuolar membrane and cell wall
S000035290 CDS YLL024C 12 97484 95565 C 1996-07-31 1996-07-31
S000003946 ORF Verified YLL023C chromosome 12 12 98835 97996 C 1996-07-31 1996-07-31 Protein of unknown function; highly conserved across species and orthologous to human TMEM33; may interact with ribosomes, based on co-purification experiments; GFP-fusion protein localizes to the endoplasmic reticulum
S000035143 CDS YLL023C 12 98835 97996 C 1996-07-31 1996-07-31
S000003945 ORF Verified YLL022C HIF1 chromosome 12 L000004439 12 100200 99043 C 1996-07-31 1996-07-31 Non-essential component of the HAT-B histone acetyltransferase complex (Hat1p-Hat2p-Hif1p), localized to the nucleus; has a role in telomeric silencing
S000034956 CDS YLL022C 12 100200 99043 C 1996-07-31 1996-07-31
S000003944 ORF Verified YLL021W SPA2 PEA1|FUS6 chromosome 12 L000001989 12 100946 105346 W -28 1996-07-31 1996-07-31 Component of the polarisome, which functions in actin cytoskeletal organization during polarized growth; acts as a scaffold for Mkk1p and Mpk1p cell wall integrity signaling components; potential Cdc28p substrate
S000034900 CDS YLL021W 12 100946 105346 W 1996-07-31 1996-07-31
S000003943 ORF Dubious YLL020C chromosome 12 12 105860 105555 C 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene KNS1
S000033932 CDS YLL020C 12 105860 105555 C 1996-07-31 1996-07-31
S000028670 ORF Dubious YLL019W-A chromosome 12 12 106907 106999 W 2003-07-29 2003-07-29 Dubious open reading frame unlikely to encode a protein; completely overlaps the verified gene KNS1
S000032516 CDS YLL019W-A 12 106907 106999 W 2003-07-29 2003-07-29
S000003942 ORF Verified YLL019C KNS1 L124 chromosome 12 L000000910 12 107898 105685 C -28 1996-07-31 1996-07-31 Nonessential putative protein kinase of unknown cellular role; member of the LAMMER family of protein kinases, which are serine/threonine kinases also capable of phosphorylating tyrosine residues
S000035019 CDS YLL019C 12 107898 105685 C 1996-07-31 1996-07-31
S000007245 ORF Verified YLL018C-A COX19 chromosome 12 L000004848 12 108971 108675 C 1999-07-17 1999-07-17 Protein required for cytochrome c oxidase assembly, located in the cytosol and mitochondrial intermembrane space; putative copper metallochaperone that delivers copper to cytochrome c oxidase; contains twin cysteine-x9-cysteine motifs
S000037730 CDS YLL018C-A 12 108971 108675 C 1999-07-17 1999-07-17
S000003941 ORF Verified YLL018C DPS1 chromosome 12 L000002834 12 111574 109901 C 1996-07-31 1996-07-31 Aspartyl-tRNA synthetase, primarily cytoplasmic; homodimeric enzyme that catalyzes the specific aspartylation of tRNA(Asp); class II aminoacyl tRNA synthetase; binding to its own mRNA may confer autoregulation
S000034907 CDS YLL018C 12 111574 109901 C 1996-07-31 1996-07-31
S000003940 pseudogene YLL017W SDC25 chromosome 12 L000002822|L000003262 12 112233 112544 W 1996-07-31 1996-07-31 Non-essential Ras guanine nucleotide exchange factor (GEF) localized to the membrane; expressed in poor nutrients and on non-fermentable carbon sources; homologous to CDC25; contains a stop codon in S288C; full-length gene includes YLL016W
S000034831 CDS YLL017W 12 112233 112544 W 1996-07-31 1996-07-31
S000003939 pseudogene YLL016W SDC25 chromosome 12 12 112846 115992 W -3 1996-07-31 1996-07-31 Non-essential Ras guanine nucleotide exchange factor (GEF) localized to the membrane; expressed in poor nutrients and on non-fermentable carbon sources; homologous to CDC25; contains a stop codon in S288C; full-length gene includes YLL017W
S000032886 CDS YLL016W 12 112846 115992 W 1996-07-31 1996-07-31
S000003938 ORF Verified YLL015W BPT1 chromosome 12 12 116431 121110 W 1996-07-31 1996-07-31 ABC type transmembrane transporter of MRP/CFTR family, found in vacuolar membrane, involved in the transport of unconjugated bilirubin and in heavy metal detoxification via glutathione conjugates, along with Ycf1p
S000032769 CDS YLL015W 12 116431 121110 W 1996-07-31 1996-07-31
S000003937 ORF Verified YLL014W EMC6 chromosome 12 12 121321 121647 W 1996-07-31 1996-07-31 Member of a transmembrane complex required for efficient folding of proteins in the ER; null mutant displays induction of the unfolded protein response
S000032696 CDS YLL014W 12 121321 121647 W 1996-07-31 1996-07-31
S000003936 ORF Verified YLL013C PUF3 chromosome 12 12 124713 122074 C 1996-07-31 1996-07-31 Protein of the mitochondrial outer surface, links the Arp2/3 complex with the mitochore during anterograde mitochondrial movement; also binds to and promotes degradation of mRNAs for select nuclear-encoded mitochondrial proteins
S000031656 CDS YLL013C 12 124713 122074 C 1996-07-31 1996-07-31
S000003935 ORF Verified YLL012W YEH1 chromosome 12 12 125533 127254 W 1996-07-31 1996-07-31 Steryl ester hydrolase, one of three gene products (Yeh1p, Yeh2p, Tgl1p) responsible for steryl ester hydrolase activity and involved in sterol homeostasis; localized to lipid particle membranes
S000031612 CDS YLL012W 12 125533 127254 W 1996-07-31 1996-07-31
S000003934 ORF Verified YLL011W SOF1 chromosome 12 L000001981 12 127522 128991 W 1996-07-31 1996-07-31 Essential protein required for biogenesis of 40S (small) ribosomal subunit; has similarity to the beta subunit of trimeric G-proteins and the splicing factor Prp4p
S000031493 CDS YLL011W 12 127522 128991 W 1996-07-31 1996-07-31
S000003933 ORF Verified YLL010C PSR1 chromosome 12 12 130612 129329 C 1996-07-31 1996-07-31 Plasma membrane associated protein phosphatase involved in the general stress response; required along with binding partner Whi2p for full activation of STRE-mediated gene expression, possibly through dephosphorylation of Msn2p
S000030481 CDS YLL010C 12 130612 129329 C 1996-07-31 1996-07-31
S000003932 ORF Verified YLL009C COX17 chromosome 12 L000003085 12 131413 131204 C 1996-07-31 1996-07-31 Copper metallochaperone that transfers copper to Sco1p and Cox11p for eventual delivery to cytochrome c oxidase; contains twin cysteine-x9-cysteine motifs
S000030695 CDS YLL009C 12 131413 131204 C 1996-07-31 1996-07-31
S000003931 ORF Verified YLL008W DRS1 chromosome 12 L000000525 12 131728 133986 W 1996-07-31 1996-07-31 Nucleolar DEAD-box protein required for ribosome assembly and function, including synthesis of 60S ribosomal subunits; constituent of 66S pre-ribosomal particles
S000030652 CDS YLL008W 12 131728 133986 W 1996-07-31 1996-07-31
S000003930 ORF Uncharacterized YLL007C chromosome 12 12 136298 134301 C 1996-07-31 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLL007C is not an essential gene
S000036717 CDS YLL007C 12 136298 134301 C 1996-07-31 1996-07-31
S000028560 ORF Uncharacterized YLL006W-A chromosome 12 12 136344 136520 W 2003-07-29 2003-07-29 Putative protein of unknown function; identified by fungal homology and RT-PCR
S000031266 CDS YLL006W-A 12 136344 136520 W 2003-07-29 2003-07-29
S000003929 ORF Verified YLL006W MMM1 YME6 chromosome 12 L000001124 12 136585 137865 W 1996-07-31 1996-07-31 ER integral membrane protein, component of the ERMES complex that links the ER to mitochondria and may promote inter-organellar calcium and phospholipid exchange as well as coordinating mitochondrial DNA replication and growth
S000036667 CDS YLL006W 12 136585 137865 W 1996-07-31 1996-07-31
S000130181 ARS ARS1207 chromosome 12 12 138184 139163 2009-05-08 2009-05-08 Putative replication origin, identified in multiple array studies, not yet confirmed by plasmid-based assay
S000003928 ORF Verified YLL005C SPO75 chromosome 12 S000007654 12 140545 137939 C 1996-07-31 1996-07-31 Meiosis-specific protein of unknown function, required for spore wall formation during sporulation; dispensable for both nuclear divisions during meiosis
S000036535 CDS YLL005C 12 140545 137939 C 1996-07-31 1996-07-31
S000003927 ORF Verified YLL004W ORC3 chromosome 12 L000003074 12 141072 142922 W 1996-07-31 1996-07-31 Subunit of the origin recognition complex, which directs DNA replication by binding to replication origins and is also involved in transcriptional silencing
S000036499 CDS YLL004W 12 141072 142922 W 1996-07-31 1996-07-31
S000003926 ORF Verified YLL003W SFI1 chromosome 12 L000003991 12 143200 146040 W 1996-07-31 1996-07-31 Centrin (Cdc31p)-binding protein required for spindle pole body (SPB) duplication, localizes to the half-bridge of the SPB, required for progression through G(2)-M transition, has similarity to Xenopus laevis XCAP-C
S000035597 CDS YLL003W 12 143200 146040 W 1996-07-31 1996-07-31
S000003925 ORF Verified YLL002W RTT109 REM50|KIM2 chromosome 12 L000003932 12 146290 147600 W 1996-07-31 1996-07-31 Histone acetyltransferase critical for cell survival in the presence of DNA damage during S phase; acetylates H3-K56 and H3-K9; involved in non-homologous end joining and in regulation of Ty1 transposition; interacts physically with Vps75p
S000035504 CDS YLL002W 12 146290 147600 W 1996-07-31 1996-07-31
S000003924 ORF Verified YLL001W DNM1 chromosome 12 L000002645 12 147889 150162 W 1996-07-31 1996-07-31 Dynamin-related GTPase required for mitochondrial fission and morphology; assembles on the cytoplasmic face of mitochondrial tubules at sites at which division will occur; also participates in endocytosis and regulating peroxisome abundance
S000035377 CDS YLL001W 12 147889 150162 W 1996-07-31 1996-07-31
S000114848 ARS ARS1208 ARS1208 ARSXII-151|CEN12 ARS chromosome 12 12 150946 151388 2006-04-13 2006-04-13 Autonomously Replicating Sequence
S000006473 centromere CEN12 CEN12 chromosome 12 L000000305 12 150946 150827 C 0 2004-10-08 2000-05-19|2004-10-08 Chromosome XII centromere
S000077287 CDEI CEN12 12 150946 150937 C 2004-10-08 2004-10-08
S000077288 CDEII CEN12 12 150936 150852 C 2004-10-08 2004-10-08
S000077289 CDEIII CEN12 12 150851 150827 C 2004-10-08 2004-10-08
S000003991 ORF Uncharacterized YLR001C chromosome 12 12 153976 151388 C 1996-07-31 1996-07-31 Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; predicted to be palmitoylated
S000031754 CDS YLR001C 12 153976 151388 C 1996-07-31 1996-07-31
S000003992 ORF Verified YLR002C NOC3 chromosome 12 12 156333 154342 C 1996-07-31 1996-07-31 Protein that forms a nuclear complex with Noc2p that binds to 66S ribosomal precursors to mediate their intranuclear transport; also binds to chromatin to promote the association of DNA replication factors and replication initiation
S000031944 CDS YLR002C 12 156333 154342 C 1996-07-31 1996-07-31
S000118470 ARS ARS1209 ARSXII-157 chromosome 12 12 156647 156883 2006-08-30 2006-08-30 Autonomously Replicating Sequence
S000003993 ORF Uncharacterized YLR003C CMS1 chromosome 12 12 157729 156854 C 1996-07-31 1996-07-31 Subunit of U3-containing 90S preribosome processome complex involved in production of 18S rRNA and assembly of small ribosomal subunit; overexpression rescues supressor mutant of mcm10; null mutant is viable
S000032071 CDS YLR003C 12 157729 156854 C 1996-07-31 1996-07-31
S000003994 ORF Verified YLR004C THI73 chromosome 12 12 159504 157933 C 1996-07-31 1996-07-31 Putative plasma membrane permease proposed to be involved in carboxylic acid uptake and repressed by thiamine; substrate of Dbf2p/Mob1p kinase; transcription is altered if mitochondrial dysfunction occurs
S000034068 CDS YLR004C 12 159504 157933 C 1996-07-31 1996-07-31
S000003995 ORF Verified YLR005W SSL1 chromosome 12 L000002085 12 160048 161433 W 1996-07-31 1996-07-31 Component of the core form of RNA polymerase transcription factor TFIIH, which has both protein kinase and DNA-dependent ATPase/helicase activities and is essential for transcription and nucleotide excision repair; interacts with Tfb4p
S000034240 CDS YLR005W 12 160048 161433 W 1996-07-31 1996-07-31
S000003996 ORF Verified YLR006C SSK1 chromosome 12 L000002084 12 163892 161754 C 1996-07-31 1996-07-31 Cytoplasmic response regulator, part of a two-component signal transducer that mediates osmosensing via a phosphorelay mechanism; dephosphorylated form is degraded by the ubiquitin-proteasome system; potential Cdc28p substrate
S000034274 CDS YLR006C 12 163892 161754 C 1996-07-31 1996-07-31
S000003997 ORF Verified YLR007W NSE1 chromosome 12 12 164391 165401 W 1996-07-31 1996-07-31 Essential subunit of the Mms21-Smc5-Smc6 complex; nuclear protein required for DNA repair and growth; has a nonstructural role in the maintenance of chromosomes
S000034350 CDS YLR007W 12 164391 165401 W 1996-07-31 1996-07-31
S000003998 ORF Verified YLR008C PAM18 TIM14 chromosome 12 12 166082 165576 C 1996-07-31 1996-07-31 Constituent of the import motor (PAM complex) component of the Translocase of the Inner Mitochondrial membrane (TIM23 complex); essential J-protein cochaperone that stimulates Ssc1p ATPase activity to drive import; inhibited by Pam16p
S000034382 CDS YLR008C 12 166082 165576 C 1996-07-31 1996-07-31
S000003999 ORF Verified YLR009W RLP24 chromosome 12 12 166536 167135 W 1996-07-31 1996-07-31 Essential protein with similarity to Rpl24Ap and Rpl24Bp, associated with pre-60S ribosomal subunits and required for ribosomal large subunit biogenesis
S000035399 CDS YLR009W 12 166536 167135 W 1996-07-31 1996-07-31
S000004000 ORF Verified YLR010C TEN1 chromosome 12 12 167801 167319 C 1996-07-31 1996-07-31 Protein that regulates telomeric length; protects telomeric ends in a complex with Cdc13p and Stn1p
S000034009 CDS YLR010C 12 167801 167319 C 1996-07-31 1996-07-31
S000006728 tRNA tS(AGA)L chromosome 12 L000003665 12 168024 167943 C 2000-05-19 2000-05-19 tRNA-Ser
S000032403 noncoding_exon tS(AGA)L 12 168024 167943 C 2000-05-19 2000-05-19
S000007079 long_terminal_repeat YLRCsigma1 chromosome 12 12 168379 168042 C 2000-05-19 2000-05-19 Ty3 LTR
S000004001 ORF Verified YLR011W LOT6 chromosome 12 12 169102 169677 W 1996-07-31 1996-07-31 FMN-dependent NAD(P)H:quinone reductase, may be involved in quinone detoxification; expression elevated at low temperature; sequesters the Cin5p transcription factor in the cytoplasm in complex with the proteasome under reducing conditions
S000034963 CDS YLR011W 12 169102 169677 W 1996-07-31 1996-07-31
S000004002 ORF Uncharacterized YLR012C chromosome 12 12 170280 169981 C 2003-09-22 2003-09-22|1996-07-31 Putative protein of unknown function; YLR012C is not an essential gene
S000035029 CDS YLR012C 12 170280 169981 C 2003-09-22 2003-09-22|1996-07-31
S000004003 ORF Verified YLR013W GAT3 chromosome 12 S000007451 12 171338 171763 W 1996-07-31 1996-07-31 Protein containing GATA family zinc finger motifs
S000035278 CDS YLR013W 12 171338 171763 W 1996-07-31 1996-07-31
S000004004 ORF Verified YLR014C PPR1 chromosome 12 L000001475 12 174981 172267 C 8 1996-07-31 1996-07-31 Zinc finger transcription factor containing a Zn(2)-Cys(6) binuclear cluster domain, positively regulates transcription of genes involved in uracil biosynthesis; activity may be modulated by interaction with Tup1p
S000036111 CDS YLR014C 12 174981 172267 C 1996-07-31 1996-07-31
S000004005 ORF Verified YLR015W BRE2 CPS60 chromosome 12 12 175226 176743 W 1996-07-31 1996-07-31 Subunit of COMPASS (Set1C) complex, which methylates Lys4 of histone H3 and functions in silencing at telomeres; has a C-terminal Sdc1 Dpy-30 Interaction (SDI) domain that mediates binding to Sdc1p; similar to trithorax-group protein ASH2L
S000036291 CDS YLR015W 12 175226 176743 W 1996-07-31 1996-07-31
S000004006 ORF Verified YLR016C PML1 chromosome 12 12 177415 176801 C 1996-07-31 1996-07-31 Subunit of the RES complex, which is required for nuclear retention of unspliced pre-mRNAs; acts in the same pathway as Pml39p and Mlp1p
S000036355 CDS YLR016C 12 177415 176801 C 1996-07-31 1996-07-31
S000004007 ORF Verified YLR017W MEU1 chromosome 12 L000004106 12 177607 178620 W 1996-07-31 1996-07-31 Methylthioadenosine phosphorylase (MTAP), catalyzes the initial step in the methionine salvage pathway; affects polyamine biosynthesis through regulation of ornithine decarboxylase (Spe1p) activity; regulates ADH2 gene expression
S000030114 CDS YLR017W 12 177607 178620 W 1996-07-31 1996-07-31
S000004008 ORF Verified YLR018C POM34 chromosome 12 12 179605 178706 C 1996-07-31 1996-07-31 Integral membrane protein of the nuclear pore; has an important role in maintaining the architecture of the pore complex
S000030160 CDS YLR018C 12 179605 178706 C 1996-07-31 1996-07-31
S000004009 ORF Verified YLR019W PSR2 chromosome 12 12 180287 181480 W 1996-07-31 1996-07-31 Functionally redundant Psr1p homolog, a plasma membrane phosphatase involved in the general stress response; required with Psr1p and Whi2p for full activation of STRE-mediated gene expression, possibly through dephosphorylation of Msn2p
S000030375 CDS YLR019W 12 180287 181480 W 1996-07-31 1996-07-31
S000004010 ORF Verified YLR020C YEH2 chromosome 12 12 183404 181788 C 1996-07-31 1996-07-31 Steryl ester hydrolase, catalyzes steryl ester hydrolysis at the plasma membrane; involved in sterol metabolism
S000029961 CDS YLR020C 12 183404 181788 C 1996-07-31 1996-07-31
S000004011 ORF Verified YLR021W IRC25 DMP2|PBA3|POC3 chromosome 12 12 183622 184161 W 1996-07-31 1996-07-31 Component of a heterodimeric Poc4p-Irc25p chaperone involved in assembly of alpha subunits into the 20S proteasome; may regulate formation of proteasome isoforms with alternative subunits under different conditions
S000031024 CDS YLR021W 12 183622 184161 W 1996-07-31 1996-07-31
S000004012 ORF Verified YLR022C SDO1 chromosome 12 S000029721 12 184925 184173 C 1996-07-31 1996-07-31 Essential protein involved in 60S ribosome maturation; ortholog of the human protein (SBDS) responsible for autosomal recessive Shwachman-Bodian-Diamond Syndrome; highly conserved across archae and eukaryotes
S000031066 CDS YLR022C 12 184925 184173 C 1996-07-31 1996-07-31
S000004013 ORF Verified YLR023C IZH3 chromosome 12 12 187128 185497 C 1996-07-31 1996-07-31 Membrane protein involved in zinc ion homeostasis, member of the four-protein IZH family, expression induced by zinc deficiency; deletion reduces sensitivity to elevated zinc and shortens lag phase, overexpression reduces Zap1p activity
S000031203 CDS YLR023C 12 187128 185497 C 1996-07-31 1996-07-31
S000004014 ORF Verified YLR024C UBR2 chromosome 12 12 193282 187664 C 1996-07-31 1996-07-31 Cytoplasmic ubiquitin-protein ligase (E3); required for ubiquitylation of Rpn4p; mediates formation of a Mub1p-Ubr2p-Rad6p complex
S000032202 CDS YLR024C 12 193282 187664 C 1996-07-31 1996-07-31
S000004015 ORF Verified YLR025W SNF7 VPL5|RNS4|VPS32|DID1 chromosome 12 L000001950 12 194453 195175 W 11.4 1996-07-31 1996-07-31 One of four subunits of the endosomal sorting complex required for transport III (ESCRT-III); involved in the sorting of transmembrane proteins into the multivesicular body (MVB) pathway; recruited from the cytoplasm to endosomal membranes
S000032371 CDS YLR025W 12 194453 195175 W 1996-07-31 1996-07-31
S000004016 ORF Verified YLR026C SED5 chromosome 12 L000001861 12 196473 195451 C 1996-07-31 1996-07-31 cis-Golgi t-SNARE syntaxin required for vesicular transport between the ER and the Golgi complex, binds at least 9 SNARE proteins
S000032400 CDS YLR026C 12 196473 195451 C 1996-07-31 1996-07-31
S000004017 ORF Verified YLR027C AAT2 ASP5 chromosome 12 L000000131|L000002677 12 198086 196830 C 17 2003-09-22 2003-09-22|1996-07-31 Cytosolic aspartate aminotransferase, involved in nitrogen metabolism; localizes to peroxisomes in oleate-grown cells
S000032507 CDS YLR027C 12 198086 196830 C 2003-09-22 2003-09-22|1996-07-31
S000007497 snoRNA snR30 SNR30 chromosome 12 L000001968 12 198785 199390 W 2007-05-09 2000-05-19|2007-05-09 H/ACA box small nucleolar RNA (snoRNA); essential gene required for cleavage of 35S primary rRNA transcript to release the precursor to the 18S rRNA
S000036751 noncoding_exon snR30 12 198785 199390 W 2007-05-09 2000-05-19|2007-05-09
S000004018 ORF Verified YLR028C ADE16 chromosome 12 L000003305 12 201316 199541 C 1997-07-30 1997-07-30|1996-07-31 Enzyme of 'de novo' purine biosynthesis containing both 5-aminoimidazole-4-carboxamide ribonucleotide transformylase and inosine monophosphate cyclohydrolase activities, isozyme of Ade17p; ade16 ade17 mutants require adenine and histidine
S000034542 CDS YLR028C 12 201316 199541 C 1997-07-30 1997-07-30|1996-07-31
S000004019 ORF Verified YLR029C RPL15A RPL10A chromosome 12 L000002705|L000001710 12 202591 201977 C 1996-07-31 1996-07-31 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl15Bp and has similarity to rat L15 ribosomal protein; binds to 5.8 S rRNA
S000034631 CDS YLR029C 12 202591 201977 C 1996-07-31 1996-07-31
S000004020 ORF Uncharacterized YLR030W chromosome 12 12 203291 204082 W 1996-07-31 1996-07-31 Putative protein of unknown function
S000034152 CDS YLR030W 12 203291 204082 W 1996-07-31 1996-07-31
S000004021 ORF Uncharacterized YLR031W chromosome 12 12 204226 204786 W 1996-07-31 1996-07-31 Putative protein of unknown function
S000034277 CDS YLR031W 12 204226 204786 W 1996-07-31 1996-07-31
S000004022 ORF Verified YLR032W RAD5 SNM2|REV2 chromosome 12 L000001559 12 204992 208501 W 22 1996-07-31 1996-07-31 DNA helicase proposed to promote replication fork regression during postreplication repair by template switching; RING finger containing ubiquitin ligase; stimulates the synthesis of free and PCNA-bound polyubiquitin chains by Ubc13p-Mms2p
S000034393 CDS YLR032W 12 204992 208501 W 1996-07-31 1996-07-31
S000004023 ORF Verified YLR033W RSC58 chromosome 12 12 208762 210270 W 1996-07-31 1996-07-31 Component of the RSC chromatin remodeling complex; RSC functions in transcriptional regulation and elongation, chromosome stability, and establishing sister chromatid cohesion; involved in telomere maintenance
S000035450 CDS YLR033W 12 208762 210270 W 1996-07-31 1996-07-31
S000004024 ORF Verified YLR034C SMF3 chromosome 12 12 211934 210513 C 1996-07-31 1996-07-31 Putative divalent metal ion transporter involved in iron homeostasis; transcriptionally regulated by metal ions; member of the Nramp family of metal transport proteins
S000035485 CDS YLR034C 12 211934 210513 C 1996-07-31 1996-07-31
S000004025 ORF Verified YLR035C MLH2 chromosome 12 12 214457 212370 C 1996-07-31 1996-07-31 Protein involved in the mismatch repair of certain frameshift intermediates and involved in meiotic recombination; forms a complex with Mlh1p
S000035575 CDS YLR035C 12 214457 212370 C 1996-07-31 1996-07-31
S000006524 tRNA tA(UGC)L chromosome 12 L000003664 12 214956 214884 C 2000-05-19 2000-05-19 tRNA-Ala (Ala2), one of 5 nuclear tRNA genes containing the tDNA-anticodon TGC (mature tRNA may be UGC or may contain modified bases), decodes GCA and probably GCG codons into alanine, one of 16 nuclear tRNAs for alanine
S000034887 noncoding_exon tA(UGC)L 12 214956 214884 C 2000-05-19 2000-05-19
S000007065 long_terminal_repeat YLRCdelta2 chromosome 12 12 215418 215081 C 2000-05-19 2000-05-19 Ty1 LTR
S000007225 transposable_element_gene YLR035C-A chromosome 12 12 218908 215441 C 1999-07-17 1999-07-17 Retrotransposon TYA Gag and TYB Pol genes; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); YLR035C-A is part of a mutant retrotransposon
S000034784 CDS YLR035C-A 12 218908 215441 C 1999-07-17 1999-07-17
S000007066 long_terminal_repeat YLRCdelta3 chromosome 12 12 221006 220669 C 2000-05-19 2000-05-19 Ty1 LTR
S000007083 long_terminal_repeat YLRWdelta4 chromosome 12 12 221007 221267 W 2000-05-19 2000-05-19 Ty1 LTR
S000004026 ORF Uncharacterized YLR036C chromosome 12 12 222133 221522 C 1996-07-31 1996-07-31 Putative protein of unknown function predicted to have transmembrane domains; interacts with HSP90 by yeast two-hybrid analysis; YLR036C is not an essential protein
S000035633 CDS YLR036C 12 222133 221522 C 1996-07-31 1996-07-31
S000004027 ORF Verified YLR037C PAU23 DAN2 chromosome 12 12 223060 222686 C 1996-07-31 1996-07-31 Cell wall mannoprotein with similarity to Tir1p, Tir2p, Tir3p, and Tir4p; member of the seripauperin multigene family encoded mainly in subtelomeric regions; expressed under anaerobic conditions, completely repressed during aerobic growth
S000036588 CDS YLR037C 12 223060 222686 C 1996-07-31 1996-07-31
S000004028 ORF Verified YLR038C COX12 chromosome 12 L000000396 12 225173 224922 C 1996-07-31 1996-07-31 Subunit VIb of cytochrome c oxidase, which is the terminal member of the mitochondrial inner membrane electron transport chain; required for assembly of cytochrome c oxidase but not required for activity after assembly; phosphorylated
S000036657 CDS YLR038C 12 225173 224922 C 1996-07-31 1996-07-31
S000004029 ORF Verified YLR039C RIC1 chromosome 12 L000001638 12 228597 225427 C 1996-07-31 1996-07-31 Protein involved in retrograde transport to the cis-Golgi network; forms heterodimer with Rgp1p that acts as a GTP exchange factor for Ypt6p; involved in transcription of rRNA and ribosomal protein genes
S000036750 CDS YLR039C 12 228597 225427 C 1996-07-31 1996-07-31
S000004031 ORF Dubious YLR041W chromosome 12 12 229378 229698 W 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YLR040C
S000030478 CDS YLR041W 12 229378 229698 W 1996-07-31 1996-07-31
S000004030 ORF Uncharacterized YLR040C chromosome 12 12 229583 228909 C 1996-07-31 1996-07-31 Putative protein of unknown function; localizes to the cell wall; predicted to be a GPI-attached protein; upregulated by Mcm1p-Alpha1p transcription factor; partially overlaps the dubious ORF YLR041W; YLR040C is not essential
S000030256 CDS YLR040C 12 229583 228909 C 1996-07-31 1996-07-31
S000004032 ORF Uncharacterized YLR042C chromosome 12 12 230452 229967 C 1996-07-31 1996-07-31 Protein of unknown function; localizes to the cytoplasm; YLL042C is not an essential gene
S000030545 CDS YLR042C 12 230452 229967 C 1996-07-31 1996-07-31
S000118471 ARS ARS1211 ARSXII-231 chromosome 12 12 231180 231422 2006-08-30 2006-08-30 Autonomously Replicating Sequence
S000004033 ORF Verified YLR043C TRX1 LMA1 chromosome 12 L000002357 12 232014 231703 C -7 1996-07-31 1996-07-31 Cytoplasmic thioredoxin isoenzyme of the thioredoxin system which protects cells against oxidative and reductive stress, forms LMA1 complex with Pbi2p, acts as a cofactor for Tsa1p, required for ER-Golgi transport and vacuole inheritance
S000031467 CDS YLR043C 12 232014 231703 C 1996-07-31 1996-07-31
S000004034 ORF Verified YLR044C PDC1 chromosome 12 L000001354 12 234082 232391 C -7 1996-07-31 1996-07-31 Major of three pyruvate decarboxylase isozymes, key enzyme in alcoholic fermentation, decarboxylates pyruvate to acetaldehyde; subject to glucose-, ethanol-, and autoregulation; involved in amino acid catabolism
S000031581 CDS YLR044C 12 234082 232391 C 1996-07-31 1996-07-31
S000004035 ORF Verified YLR045C STU2 chromosome 12 L000003019 12 237704 235038 C 1996-07-31 1996-07-31 Microtubule-associated protein (MAP) of the XMAP215/Dis1 family; regulates microtubule dynamics during spindle orientation and metaphase chromosome alignment; interacts with spindle pole body component Spc72p
S000032584 CDS YLR045C 12 237704 235038 C 1996-07-31 1996-07-31
S000004036 ORF Uncharacterized YLR046C RLA1 chromosome 12 12 238814 238002 C 1996-07-31 1996-07-31 Putative membrane protein; member of the fungal lipid-translocating exporter (LTE) family of proteins; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance
S000032679 CDS YLR046C 12 238814 238002 C 1996-07-31 1996-07-31
S000004037 ORF Verified YLR047C FRE8 chromosome 12 12 241408 239348 C 1996-07-31 1996-07-31 Protein with sequence similarity to iron/copper reductases, involved in iron homeostasis; deletion mutant has iron deficiency/accumulation growth defects; expression increased in the absence of copper-responsive transcription factor Mac1p
S000032758 CDS YLR047C 12 241408 239348 C 1996-07-31 1996-07-31
S000004038 ORF Verified YLR048W RPS0B YST2|NAB1B chromosome 12 L000002908 12 242233 243350 W 1996-07-31 1996-07-31 Protein component of the small (40S) ribosomal subunit, nearly identical to Rps0Ap; required for maturation of 18S rRNA along with Rps0Ap; deletion of either RPS0 gene reduces growth rate, deletion of both genes is lethal
S000032917 CDS YLR048W 12 242233 242322 W 1996-07-31 1996-07-31
S000032918 CDS YLR048W 12 242682 243350 W 1996-07-31 1996-07-31
S000032919 intron YLR048W 12 242323 242681 W 1996-07-31 1996-07-31
S000004039 ORF Uncharacterized YLR049C chromosome 12 12 245173 243887 C 1996-07-31 1996-07-31 Putative protein of unknown function
S000034828 CDS YLR049C 12 245173 243887 C 1996-07-31 1996-07-31
S000004040 ORF Uncharacterized YLR050C chromosome 12 12 246073 245588 C 1996-07-31 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; YLR050C is not an essential gene
S000033086 CDS YLR050C 12 246073 245588 C 1996-07-31 1996-07-31
S000004041 ORF Verified YLR051C FCF2 chromosome 12 12 246978 246325 C 1996-07-31 1996-07-31 Essential nucleolar protein involved in the early steps of 35S rRNA processing; interacts with Faf1p; member of a transcriptionally co-regulated set of genes called the RRB regulon
S000033845 CDS YLR051C 12 246978 246325 C 1996-07-31 1996-07-31
S000004042 ORF Verified YLR052W IES3 chromosome 12 12 247202 247954 W 1996-07-31 1996-07-31 Subunit of the INO80 chromatin remodeling complex
S000034056 CDS YLR052W 12 247202 247954 W 1996-07-31 1996-07-31
S000004043 ORF Uncharacterized YLR053C chromosome 12 12 248427 248101 C 1996-07-31 1996-07-31 Putative protein of unknown function
S000034893 CDS YLR053C 12 248427 248101 C 1996-07-31 1996-07-31
S000004044 ORF Verified YLR054C OSW2 chromosome 12 12 250979 248718 C 2003-09-27 2003-09-27|1996-07-31 Protein of unknown function proposed to be involved in the assembly of the spore wall
S000035045 CDS YLR054C 12 250861 248718 C 2003-09-27 2003-09-27|1996-07-31
S000035044 CDS YLR054C 12 250979 250949 C 2003-09-27 2003-09-27
S000035046 intron YLR054C 12 250948 250862 C 2003-09-27 2003-09-27
S000004045 ORF Verified YLR055C SPT8 chromosome 12 L000002034 12 253081 251273 C 30 1996-07-31 1996-07-31 Subunit of the SAGA transcriptional regulatory complex but not present in SAGA-like complex SLIK/SALSA, required for SAGA-mediated inhibition at some promoters
S000035199 CDS YLR055C 12 253081 251273 C 1996-07-31 1996-07-31
S000004046 ORF Verified YLR056W ERG3 PSO6|SYR1 chromosome 12 L000000570|L000004043 12 253862 254959 W 1996-07-31 1996-07-31 C-5 sterol desaturase, catalyzes the introduction of a C-5(6) double bond into episterol, a precursor in ergosterol biosynthesis; mutants are viable, but cannot grow on non-fermentable carbon sources
S000036224 CDS YLR056W 12 253862 254959 W 1996-07-31 1996-07-31
S000004047 ORF Uncharacterized YLR057W chromosome 12 12 255307 257856 W 1996-07-31 1996-07-31 Putative protein of unknown function; YLR050C is not an essential gene
S000036328 CDS YLR057W 12 255307 257856 W 1996-07-31 1996-07-31
S000004048 ORF Verified YLR058C SHM2 SHMT2 chromosome 12 L000001882 12 259402 257993 C 1996-07-31 1996-07-31 Cytosolic serine hydroxymethyltransferase, converts serine to glycine plus 5,10 methylenetetrahydrofolate; major isoform involved in generating precursors for purine, pyrimidine, amino acid, and lipid biosynthesis
S000036381 CDS YLR058C 12 259402 257993 C 1996-07-31 1996-07-31
S000004049 ORF Verified YLR059C REX2 YNT20 chromosome 12 L000003035 12 260548 259739 C 1996-07-31 1996-07-31 3'-5' RNA exonuclease; involved in 3'-end processing of U4 and U5 snRNAs, 5S and 5.8S rRNAs, and RNase P and RNase MRP RNA; localized to mitochondria and null suppresses escape of mtDNA to nucleus in yme1 yme2 mutants; RNase D exonuclease
S000036443 CDS YLR059C 12 260548 259739 C 1996-07-31 1996-07-31
S000004050 ORF Verified YLR060W FRS1 chromosome 12 L000000629 12 260980 262767 W 1996-07-31 1996-07-31 Beta subunit of cytoplasmic phenylalanyl-tRNA synthetase, forms a tetramer with Frs2p to generate active enzyme; able to hydrolyze mis-aminoacylated tRNA-Phe, which could contribute to translational quality control
S000030011 CDS YLR060W 12 260980 262767 W 1996-07-31 1996-07-31
S000004051 ORF Verified YLR061W RPL22A chromosome 12 L000004460 12 263195 263949 W 1996-07-31 1996-07-31 Protein component of the large (60S) ribosomal subunit, has similarity to Rpl22Bp and to rat L22 ribosomal protein
S000030138 CDS YLR061W 12 263195 263206 W 1996-07-31 1996-07-31
S000030139 CDS YLR061W 12 263596 263949 W 1996-07-31 1996-07-31
S000030140 intron YLR061W 12 263207 263595 W 1996-07-31 1996-07-31
S000004052 ORF Dubious YLR062C BUD28 chromosome 12 12 263955 263578 C 1996-07-31 1996-07-31 Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene RPL22A; diploid mutant displays a weak budding pattern phenotype in a systematic assay
S000031086 CDS YLR062C 12 263955 263578 C 1996-07-31 1996-07-31
S000004053 ORF Uncharacterized YLR063W chromosome 12 12 264158 265255 W 1996-07-31 1996-07-31 Putative S-adenosylmethionine-dependent methyltransferase; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLR063W is not an essential gene
S000031280 CDS YLR063W 12 264158 265255 W 1996-07-31 1996-07-31
S000004054 ORF Uncharacterized YLR064W chromosome 12 12 265457 266278 W 1996-07-31 1996-07-31 Putative protein of unknown function; highly conserved across species and orthologous to human TMEM33; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; YLR064W is not an essential gene
S000031356 CDS YLR064W 12 265457 266278 W 1996-07-31 1996-07-31
S000004055 ORF Uncharacterized YLR065C chromosome 12 12 266919 266374 C 1996-07-31 1996-07-31 Putative protein of unknown function; YLR065C is not an essential gene
S000031430 CDS YLR065C 12 266919 266374 C 1996-07-31 1996-07-31
S000004056 ORF Verified YLR066W SPC3 chromosome 12 L000003542 12 267170 267724 W 1996-07-31 1996-07-31 Subunit of signal peptidase complex (Spc1p, Spc2p, Spc3p, Sec11p), which catalyzes cleavage of N-terminal signal sequences of proteins targeted to the secretory pathway; homologous to mammalian SPC22/23
S000032483 CDS YLR066W 12 267170 267724 W 1996-07-31 1996-07-31
S000004057 ORF Verified YLR067C PET309 chromosome 12 L000001401 12 270711 267814 C 1996-07-31 1996-07-31 Specific translational activator for the COX1 mRNA, also influences stability of intron-containing COX1 primary transcripts; localizes to the mitochondrial inner membrane; contains seven pentatricopeptide repeats (PPRs)
S000032544 CDS YLR067C 12 270711 267814 C 1996-07-31 1996-07-31
S000004058 ORF Verified YLR068W FYV7 chromosome 12 12 271009 271464 W 1996-07-31 1996-07-31 Essential protein required for maturation of 18S rRNA; required for survival upon exposure to K1 killer toxin
S000032669 CDS YLR068W 12 271009 271464 W 1996-07-31 1996-07-31
S000004059 ORF Verified YLR069C MEF1 chromosome 12 L000001057 12 273916 271631 C 1996-07-31 1996-07-31 Mitochondrial elongation factor involved in translational elongation
S000033337 CDS YLR069C 12 273916 271631 C 1996-07-31 1996-07-31
S000004060 ORF Verified YLR070C XYL2 chromosome 12 12 275212 274142 C 1996-07-31 1996-07-31 Xylitol dehydrogenase, converts xylitol to D-xylulose; expression induced by xylose, even though this pentose sugar is not well utilized by S. cerevisiae; null mutant has cell wall defect
S000033430 CDS YLR070C 12 275212 274142 C 1996-07-31 1996-07-31
S000004061 ORF Verified YLR071C RGR1 MED14 chromosome 12 L000001629 12 278627 275379 C 70 1996-07-31 1996-07-31 Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; required for glucose repression, HO repression, RME1 repression and sporulation
S000034340 CDS YLR071C 12 278627 275379 C 1996-07-31 1996-07-31
S000004062 ORF Uncharacterized YLR072W chromosome 12 12 278863 280944 W 1996-07-31 1996-07-31 Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; YLR072W is not an esssential gene
S000034470 CDS YLR072W 12 278863 280944 W 1996-07-31 1996-07-31
S000004063 ORF Verified YLR073C RFU1 chromosome 12 12 281622 281020 C 1996-07-31 1996-07-31 Protein that inhibits Doa4p deubiquitinating activity; contributes to ubiquitin homeostasis by regulating the conversion of free ubiquitin chains to ubiquitin monomers by Doa4p; GFP-fusion protein localizes to endosomes
S000034520 CDS YLR073C 12 281622 281020 C 1996-07-31 1996-07-31
S000004064 ORF Verified YLR074C BUD20 chromosome 12 12 282457 281957 C 1996-07-31 1996-07-31 Protein involved in bud-site selection; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern
S000035544 CDS YLR074C 12 282457 281957 C 1996-07-31 1996-07-31
S000004065 ORF Verified YLR075W RPL10 QSR1|GRC5 chromosome 12 L000000727 12 282928 283593 W 1996-07-31 1996-07-31 Protein component of the large (60S) ribosomal subunit, responsible for joining the 40S and 60S subunits; regulates translation initiation; has similarity to rat L10 ribosomal protein and to members of the QM gene family
S000035684 CDS YLR075W 12 282928 283593 W 1996-07-31 1996-07-31
S000004066 ORF Dubious YLR076C chromosome 12 12 283608 283186 C 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the essential gene RPL10 which encodes the ribosomal protein L10
S000035729 CDS YLR076C 12 283608 283186 C 1996-07-31 1996-07-31
S000004067 ORF Uncharacterized YLR077W FMP25 chromosome 12 12 283873 285624 W 1996-07-31 1996-07-31 Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
S000036693 CDS YLR077W 12 283873 285624 W 1996-07-31 1996-07-31
S000004068 ORF Verified YLR078C BOS1 SEC32 chromosome 12 L000000192 12 286560 285737 C 1996-07-31 1996-07-31 v-SNARE (vesicle specific SNAP receptor), localized to the endoplasmic reticulum membrane and necessary for vesicular transport from the ER to the Golgi
S000036710 CDS YLR078C 12 286468 285737 C 1996-07-31 1996-07-31
S000036709 CDS YLR078C 12 286560 286558 C 1996-07-31 1996-07-31
S000036711 intron YLR078C 12 286557 286469 C 1996-07-31 1996-07-31
S000004069 ORF Verified YLR079W SIC1 SDB25 chromosome 12 L000001886|L000001822 12 286821 287675 W 1996-07-31 1996-07-31 Inhibitor of Cdc28-Clb kinase complexes that controls G1/S phase transition, preventing premature S phase and ensuring genomic integrity; phosphorylation targets Sic1p for SCF(CDC4)-dependent turnover; functional homolog of mammalian Kip1
S000036800 CDS YLR079W 12 286821 287675 W 1996-07-31 1996-07-31
S000004070 ORF Verified YLR080W EMP46 chromosome 12 12 287917 289251 W 1996-07-31 1996-07-31 Integral membrane component of endoplasmic reticulum-derived COPII-coated vesicles, which function in ER to Golgi transport
S000037384 CDS YLR080W 12 287917 289251 W 1996-07-31 1996-07-31
S000118472 ARS ARS1212 ARSXII-289 chromosome 12 12 289221 289469 2006-08-30 2006-08-30 Late-firing chromosomal replication origin
S000004071 ORF Verified YLR081W GAL2 chromosome 12 L000000659 12 290213 291937 W 44 1996-07-31 1996-07-31 Galactose permease, required for utilization of galactose; also able to transport glucose
S000037506 CDS YLR081W 12 290213 291937 W 1996-07-31 1996-07-31
S000004072 ORF Verified YLR082C SRL2 chromosome 12 L000004670 12 293573 292395 C 1996-07-31 1996-07-31 Protein of unknown function; overexpression suppresses the lethality caused by a rad53 null mutation
S000037548 CDS YLR082C 12 293573 292395 C 1996-07-31 1996-07-31
S000004073 ORF Verified YLR083C EMP70 TMN1|p24a chromosome 12 L000000550 12 296095 294092 C 1996-07-31 1996-07-31 Protein with a role in cellular adhesion and filamentous growth; similar to Tmn2p and Tmn3p; member of Transmembrane Nine family of proteins with 9 transmembrane segments; 24kDa cleavage product found in endosome-enriched membrane fractions
S000030358 CDS YLR083C 12 296095 294092 C 1996-07-31 1996-07-31
S000004074 ORF Verified YLR084C RAX2 chromosome 12 12 300252 296590 C 1996-07-31 1996-07-31 N-glycosylated protein involved in the maintenance of bud site selection during bipolar budding; localization requires Rax1p; RAX2 mRNA stability is regulated by Mpt5p
S000030482 CDS YLR084C 12 300252 296590 C 1996-07-31 1996-07-31
S000004075 ORF Verified YLR085C ARP6 chromosome 12 L000003435 12 301990 300674 C 1996-07-31 1996-07-31 Actin-related protein that binds nucleosomes; a component of the SWR1 complex, which exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A
S000030596 CDS YLR085C 12 301990 300674 C 1996-07-31 1996-07-31
S000004076 ORF Verified YLR086W SMC4 chromosome 12 L000003472 12 302244 306500 W 1996-07-31 1996-07-31 Subunit of the condensin complex; reorganizes chromosomes during cell division; forms a complex with Smc2p that has ATP-hydrolyzing and DNA-binding activity; required for tRNA gene clustering at the nucleolus; potential Cdc28p substrate
S000031513 CDS YLR086W 12 302244 306500 W 1996-07-31 1996-07-31
S000004077 ORF Verified YLR087C CSF1 chromosome 12 12 315732 306856 C 1996-07-31 1996-07-31 Protein required for fermentation at low temperature; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
S000031547 CDS YLR087C 12 315732 306856 C 1996-07-31 1996-07-31
S000004078 ORF Verified YLR088W GAA1 END2 chromosome 12 L000000557 12 316108 317952 W 1996-07-31 1996-07-31 Subunit of the GPI (glycosylphosphatidylinositol):protein transamidase complex, removes the GPI-anchoring signal and attaches GPI to proteins in the ER
S000031702 CDS YLR088W 12 316108 317952 W 1996-07-31 1996-07-31
S000004079 ORF Uncharacterized YLR089C ALT1 chromosome 12 12 320016 318238 C 1996-07-31 1996-07-31 Alanine transaminase (glutamic pyruvic transaminase); involved in alanine biosynthetic and catabolic processes; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
S000031709 CDS YLR089C 12 320016 318238 C 1996-07-31 1996-07-31
S000004080 ORF Verified YLR090W XDJ1 chromosome 12 L000002487 12 320702 322081 W 1996-07-31 1996-07-31 Putative chaperone, homolog of E. coli DnaJ, closely related to Ydj1p; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies
S000032708 CDS YLR090W 12 320702 322081 W 1996-07-31 1996-07-31
S000004081 ORF Verified YLR091W GEP5 RRG5 chromosome 12 12 322298 323179 W 1996-07-31 1996-07-31 Protein of unknown function, required for mitochondrial genome maintenance; detected in highly purified mitochondria in high-throughput studies; null mutant has decreased levels of cardiolipin and phosphatidylethanolamine
S000032790 CDS YLR091W 12 322298 323179 W 1996-07-31 1996-07-31
S000004082 ORF Verified YLR092W SUL2 chromosome 12 L000003473 12 323545 326226 W 1996-07-31 1996-07-31 High affinity sulfate permease; sulfate uptake is mediated by specific sulfate transporters Sul1p and Sul2p, which control the concentration of endogenous activated sulfate intermediates
S000033523 CDS YLR092W 12 323545 326226 W 1996-07-31 1996-07-31
S000004083 ORF Verified YLR093C NYV1 MAM2 chromosome 12 L000004690 12 327416 326514 C 2000-07-14 2000-07-14|1996-07-31 v-SNARE component of the vacuolar SNARE complex involved in vesicle fusion; inhibits ATP-dependent Ca(2+) transport activity of Pmc1p in the vacuolar membrane
S000033559 CDS YLR093C 12 327259 326514 C 2000-07-14 2000-07-14|1996-07-31
S000033558 CDS YLR093C 12 327416 327401 C 2000-07-14 2000-07-14
S000033560 intron YLR093C 12 327400 327260 C 2000-07-14 2000-07-14
S000004084 ORF Verified YLR094C GIS3 chromosome 12 L000004863 12 329239 327731 C 1996-07-31 1996-07-31 Protein of unknown function
S000033649 CDS YLR094C 12 329239 327731 C 1996-07-31 1996-07-31
S000004085 ORF Verified YLR095C IOC2 chromosome 12 12 332116 329678 C 1996-07-31 1996-07-31 Member of a complex (Isw1b) with Isw1p and Ioc4p that exhibits nucleosome-stimulated ATPase activity and acts within coding regions to coordinate transcription elongation with termination and processing, contains a PHD finger motif
S000033765 CDS YLR095C 12 332116 329678 C 1996-07-31 1996-07-31
S000004086 ORF Verified YLR096W KIN2 chromosome 12 L000000902 12 332591 336034 W 1996-07-31 1996-07-31 Serine/threonine protein kinase involved in regulation of exocytosis; localizes to the cytoplasmic face of the plasma membrane; closely related to Kin1p
S000034747 CDS YLR096W 12 332591 336034 W 1996-07-31 1996-07-31
S000004087 ORF Verified YLR097C HRT3 chromosome 12 12 337266 336232 C 1996-07-31 1996-07-31 Putative SCF-ubiquitin ligase F-box protein, based on both genetic and physical interactions and sequence similarity; identified in association with Cdc53p, Skp1p and Ubi4 in large and small-scale studies
S000034800 CDS YLR097C 12 337266 336232 C 1996-07-31 1996-07-31
S000004088 ORF Verified YLR098C CHA4 SIL3|SIL2 chromosome 12 L000002854 12 339474 337528 C 1996-07-31 1996-07-31 DNA binding transcriptional activator, mediates serine/threonine activation of the catabolic L-serine (L-threonine) deaminase (CHA1); Zinc-finger protein with Zn[2]-Cys[6] fungal-type binuclear cluster domain
S000034932 CDS YLR098C 12 339474 337528 C 1996-07-31 1996-07-31
S000004089 ORF Verified YLR099C ICT1 chromosome 12 12 340929 339745 C 1996-07-31 1996-07-31 Lysophosphatidic acid acyltransferase, responsible for enhanced phospholipid synthesis during organic solvent stress; null displays increased sensitivity to Calcofluor white; highly expressed during organic solvent stress
S000035852 CDS YLR099C 12 340929 339745 C 1996-07-31 1996-07-31
S000007618 ORF Uncharacterized YLR099W-A chromosome 12 12 341326 341589 W 2001-02-26 2001-02-26 Putative protein of unknown function
S000037216 CDS YLR099W-A 12 341326 341589 W 2001-02-26 2001-02-26
S000004090 ORF Verified YLR100W ERG27 chromosome 12 12 341811 342854 W 1996-07-31 1996-07-31 3-keto sterol reductase, catalyzes the last of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis; mutants are sterol auxotrophs
S000033168 CDS YLR100W 12 341811 342854 W 1996-07-31 1996-07-31
S000004091 ORF Dubious YLR101C chromosome 12 12 342962 342567 C 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified, essential ORF ERG27/YLR100W
S000033199 CDS YLR101C 12 342962 342567 C 1996-07-31 1996-07-31
S000004092 ORF Verified YLR102C APC9 chromosome 12 L000004321 12 343768 342971 C 1996-07-31 1996-07-31 Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition
S000033261 CDS YLR102C 12 343768 342971 C 1996-07-31 1996-07-31
S000004093 ORF Verified YLR103C CDC45 SLD4 chromosome 12 L000003380 12 345942 343990 C 1996-07-31 1996-07-31 DNA replication initiation factor; recruited to MCM pre-RC complexes at replication origins; promotes release of MCM from Mcm10p, recruits elongation machinery; mutants in human homolog may cause velocardiofacial and DiGeorge syndromes
S000033319 CDS YLR103C 12 345942 343990 C 1996-07-31 1996-07-31
S000004094 ORF Uncharacterized YLR104W chromosome 12 12 346586 346981 W 1996-07-31 1996-07-31 Putative protein of unknown function; mutant is deficient in amounts of cell wall mannosylphosphate; genetic interactions suggest a role in ER-associated protein degradation (ERAD)
S000034290 CDS YLR104W 12 346586 346981 W 1996-07-31 1996-07-31
S000004095 ORF Verified YLR105C SEN2 chromosome 12 L000001863 12 348181 347048 C 1996-07-31 1996-07-31 Subunit of the tRNA splicing endonuclease, which is composed of Sen2p, Sen15p, Sen34p, and Sen54p; Sen2p contains the active site for tRNA 5' splice site cleavage and has similarity to Sen34p and to Archaeal tRNA splicing endonuclease
S000034355 CDS YLR105C 12 348181 347048 C 1996-07-31 1996-07-31
S000007313 snoRNA snR79 SNR79 Z9 chromosome 12 L000004807 12 348511 348428 C 2000-05-19 2000-05-19 C/D box small nucleolar RNA (snoRNA), guides 2'-O-methylation of small subunit (SSU) rRNA at position C1007
S000031838 noncoding_exon snR79 12 348511 348428 C 2000-05-19 2000-05-19
S000004096 ORF Verified YLR106C MDN1 REA1 chromosome 12 S000028419 12 363739 349007 C 1996-07-31 1996-07-31 Huge dynein-related AAA-type ATPase (midasin), forms extended pre-60S particle with the Rix1 complex (Rix1p-Ipi1p-Ipi3p), may mediate ATP-dependent remodeling of 60S subunits and subsequent export from nucleoplasm to cytoplasm
S000035344 CDS YLR106C 12 363739 349007 C 1996-07-31 1996-07-31
S000004097 ORF Verified YLR107W REX3 chromosome 12 12 364117 365331 W 1996-07-31 1996-07-31 RNA exonuclease; required for maturation of the RNA component of RNase MRP; functions redundantly with Rnh70p and Rex2p in processing of U5 snRNA and RNase P RNA; member of RNase D family of exonucleases
S000035537 CDS YLR107W 12 364117 365331 W 1996-07-31 1996-07-31
S000007067 long_terminal_repeat YLRCdelta5 chromosome 12 12 366145 365811 C 2000-05-19 2000-05-19 Ty1 LTR
S000006494 snRNA snR6 SNR6 chromosome 12 L000001961 12 366236 366347 W 2000-05-19 2000-05-19 U6 spliceosomal RNA, interacts with U4; homology to snRNA U6, interacts with snr14
S000034320 noncoding_exon snR6 12 366236 366347 W 2000-05-19 2000-05-19
S000004098 ORF Uncharacterized YLR108C chromosome 12 12 368125 366668 C 1996-07-31 1996-07-31 Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; YLR108C is not an esssential gene
S000035581 CDS YLR108C 12 368125 366668 C 1996-07-31 1996-07-31
S000004099 ORF Verified YLR109W AHP1 chromosome 12 S000007480 12 368782 369312 W 1996-07-31 1996-07-31 Thiol-specific peroxiredoxin, reduces hydroperoxides to protect against oxidative damage; function in vivo requires covalent conjugation to Urm1p
S000036533 CDS YLR109W 12 368782 369312 W 1996-07-31 1996-07-31
S000004100 ORF Verified YLR110C CCW12 chromosome 12 12 370099 369698 C 1996-07-31 1996-07-31 Cell wall mannoprotein, mutants are defective in mating and agglutination, expression is downregulated by alpha-factor
S000037291 CDS YLR110C 12 370099 369698 C 1996-07-31 1996-07-31
S000004101 ORF Dubious YLR111W chromosome 12 12 370392 370724 W 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000037464 CDS YLR111W 12 370392 370724 W 1996-07-31 1996-07-31
S000004102 ORF Dubious YLR112W chromosome 12 12 370792 371211 W 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000030153 CDS YLR112W 12 370792 371211 W 1996-07-31 1996-07-31
S000004103 ORF Verified YLR113W HOG1 SSK3 chromosome 12 L000000797 12 371621 372928 W 1996-07-31 1996-07-31 Mitogen-activated protein kinase involved in osmoregulation via three independent osmosensors; mediates the recruitment and activation of RNA Pol II at Hot1p-dependent promoters; localization regulated by Ptp2p and Ptp3p
S000030351 CDS YLR113W 12 371621 372928 W 1996-07-31 1996-07-31
S000118473 ARS ARS1213 ARSXII-373 chromosome 12 12 373157 373400 2006-08-30 2006-08-30 Autonomously Replicating Sequence
S000007095 long_terminal_repeat YLRWsigma2 chromosome 12 12 374000 374339 W 2000-05-19 2000-05-19 Ty3 LTR
S000006704 tRNA tR(ACG)L chromosome 12 L000003646 12 374356 374428 W 2000-05-19 2000-05-19 tRNA-Arg (Arg2), one of 6 nuclear tRNA genes containing the tDNA-anticodon ACG (converted to ICG in the mature tRNA), decodes CGU, CGC, and probably CGA codons into arginine, one of 19 nuclear tRNAs for arginine
S000030443 noncoding_exon tR(ACG)L 12 374356 374428 W 2000-05-19 2000-05-19
S000004104 ORF Verified YLR114C AVL9 chromosome 12 S000029049|S000029007 12 377239 374945 C 1996-07-31 1996-07-31 Conserved protein involved in exocytic transport from the Golgi; mutation is synthetically lethal with apl2 vps1 double mutation; member of a protein superfamily with orthologs in diverse organisms
S000030429 CDS YLR114C 12 377239 374945 C 1996-07-31 1996-07-31
S000004105 ORF Verified YLR115W CFT2 YDH1 chromosome 12 L000003599 12 377986 380565 W 1996-07-31 1996-07-31 Subunit of the mRNA cleavage and polyadenlylation factor (CPF); required for pre-mRNA cleavage, polyadenylation and poly(A) site recognition, 43% similarity with the mammalian CPSF-100 protein.
S000031398 CDS YLR115W 12 377986 380565 W 1996-07-31 1996-07-31
S000004106 ORF Verified YLR116W MSL5 chromosome 12 L000004109 12 380823 382253 W 1996-07-31 1996-07-31 Component of the commitment complex, which defines the first step in the splicing pathway; essential protein that interacts with Mud2p and Prp40p, forming a bridge between the intron ends; also involved in nuclear retention of pre-mRNA
S000031525 CDS YLR116W 12 380823 382253 W 1996-07-31 1996-07-31
S000130182 ARS ARS1214 chromosome 12 12 384535 384726 2009-05-08 2009-05-08 Putative replication origin, identified in multiple array studies, not yet confirmed by plasmid-based assay
S000004107 ORF Verified YLR117C CLF1 NTC77|SYF3 chromosome 12 L000004628 12 384535 382472 C 1996-07-31 1996-07-31 Member of the NineTeen Complex (NTC) that contains Prp19p and stabilizes U6 snRNA in catalytic forms of the spliceosome containing U2, U5, and U6 snRNAs; homolog of Drosophila crooked neck protein; interacts with U1 snRNP proteins
S000031606 CDS YLR117C 12 384535 382472 C 1996-07-31 1996-07-31
S000004108 ORF Verified YLR118C APT1 chromosome 12 12 385409 384726 C 1996-07-31 1996-07-31 Acyl-protein thioesterase responsible for depalmitoylation of Gpa1p; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and nucleus and is induced in response to the DNA-damaging agent MMS
S000032586 CDS YLR118C 12 385409 384726 C 1996-07-31 1996-07-31
S000004109 ORF Verified YLR119W SRN2 VPL16|VPS37|SRN10 chromosome 12 L000003103 12 385535 386176 W 1996-07-31 1996-07-31 Component of the ESCRT-I complex, which is involved in ubiquitin-dependent sorting of proteins into the endosome; suppressor of rna1-1 mutation; may be involved in RNA export from nucleus
S000032725 CDS YLR119W 12 385535 386176 W 1996-07-31 1996-07-31
S000004110 ORF Verified YLR120C YPS1 YAP3 chromosome 12 L000002491 12 388221 386512 C 1996-07-31 1996-07-31 Aspartic protease, attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor
S000032796 CDS YLR120C 12 388221 386512 C 1996-07-31 1996-07-31
S000028674 ORF Dubious YLR120W-A chromosome 12 12 388673 388774 W 2003-07-29 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data; partially overlaps the verified ORF YLR121C
S000032521 CDS YLR120W-A 12 388673 388774 W 2003-07-29 2003-07-29
S000004111 ORF Verified YLR121C YPS3 YPS4 chromosome 12 L000004383 12 390271 388745 C 1996-07-31 1996-07-31 Aspartic protease, attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor
S000032903 CDS YLR121C 12 390271 388745 C 1996-07-31 1996-07-31
S000004112 ORF Dubious YLR122C chromosome 12 12 391332 390955 C 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YLR123C
S000033010 CDS YLR122C 12 391332 390955 C 1996-07-31 1996-07-31
S000004113 ORF Dubious YLR123C chromosome 12 12 391408 391079 C 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YLR122C; contains characteristic aminoacyl-tRNA motif
S000033100 CDS YLR123C 12 391408 391079 C 1996-07-31 1996-07-31
S000004114 ORF Dubious YLR124W chromosome 12 12 391601 391945 W 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000033902 CDS YLR124W 12 391601 391945 W 1996-07-31 1996-07-31
S000004115 ORF Uncharacterized YLR125W chromosome 12 12 393485 393895 W 1996-07-31 1996-07-31 Putative protein of unknown function; mutant has decreased Ty3 transposition; YLR125W is not an essential gene
S000034058 CDS YLR125W 12 393485 393895 W 1996-07-31 1996-07-31
S000004116 ORF Uncharacterized YLR126C chromosome 12 12 395521 394766 C 1996-07-31 1996-07-31 Putative protein of unknown function with similarity to glutamine amidotransferase proteins; has Aft1p-binding motif in the promoter; may be involved in copper and iron homeostasis; YLR126C is not an essential protein
S000034899 CDS YLR126C 12 395521 394766 C 1996-07-31 1996-07-31
S000004117 ORF Verified YLR127C APC2 TID2|RSI1 chromosome 12 L000003970|L000004348 12 398320 395759 C 1996-07-31 1996-07-31 Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; similar to cullin Cdc53p
S000035048 CDS YLR127C 12 398320 395759 C 1996-07-31 1996-07-31
S000004118 ORF Verified YLR128W DCN1 chromosome 12 12 398531 399434 W 1996-07-31 1996-07-31 Scaffold-type E3 ligase required for cullin neddylation and ubiquitin ligase activation; contains a ubiquitin-binding domain (UBA) for ubiquitin and Nedd8 (Rub1p) interaction and a PONY domain involved in cullin binding and neddylation
S000035287 CDS YLR128W 12 398531 398533 W 1996-07-31 1996-07-31
S000035288 CDS YLR128W 12 398628 399434 W 1996-07-31 1996-07-31
S000035289 intron YLR128W 12 398534 398627 W 1996-07-31 1996-07-31
S000004119 ORF Verified YLR129W DIP2 UTP12 chromosome 12 L000003088 12 399658 402489 W 1996-07-31 1996-07-31 Nucleolar protein, specifically associated with the U3 snoRNA, part of the large ribonucleoprotein complex known as the small subunit (SSU) processome, required for 18S rRNA biogenesis, part of the active pre-rRNA processing complex
S000036230 CDS YLR129W 12 399658 402489 W 1996-07-31 1996-07-31
S000004120 ORF Verified YLR130C ZRT2 chromosome 12 L000004167 12 404063 402795 C 1996-07-31 1996-07-31 Low-affinity zinc transporter of the plasma membrane; transcription is induced under low-zinc conditions by the Zap1p transcription factor
S000037080 CDS YLR130C 12 404063 402795 C 1996-07-31 1996-07-31
S000004121 ORF Verified YLR131C ACE2 chromosome 12 L000000020 12 406823 404511 C 1996-07-31 1996-07-31 Transcription factor that activates expression of early G1-specific genes, localizes to daughter cell nuclei after cytokinesis and delays G1 progression in daughters, localization is regulated by phosphorylation; potential Cdc28p substrate
S000037197 CDS YLR131C 12 406823 404511 C 1996-07-31 1996-07-31
S000004122 ORF Uncharacterized YLR132C chromosome 12 12 408156 407284 C 1996-07-31 1996-07-31 Essential protein of unknown function; fluorescent protein (GFP or YFP)-tagged protein localizes to mitochondria, cytoplasm and nucleus
S000037305 CDS YLR132C 12 408156 407284 C 1996-07-31 1996-07-31
S000004123 ORF Verified YLR133W CKI1 chromosome 12 L000000346 12 408446 410194 W 1996-07-31 1996-07-31 Choline kinase, catalyzing the first step in phosphatidylcholine synthesis via the CDP-choline (Kennedy pathway); exhibits some ethanolamine kinase activity contributing to phosphatidylethanolamine synthesis via the CDP-ethanolamine pathway
S000030014 CDS YLR133W 12 408446 410194 W 1996-07-31 1996-07-31
S000004124 ORF Verified YLR134W PDC5 chromosome 12 L000001356 12 410724 412415 W 1996-07-31 1996-07-31 Minor isoform of pyruvate decarboxylase, key enzyme in alcoholic fermentation, decarboxylates pyruvate to acetaldehyde, regulation is glucose- and ethanol-dependent, repressed by thiamine, involved in amino acid catabolism
S000030184 CDS YLR134W 12 410724 412415 W 1996-07-31 1996-07-31
S000118474 ARS ARS1215 ARSXII-413 chromosome 12 12 412669 412897 2006-08-30 2006-08-30 Autonomously Replicating Sequence
S000004125 ORF Verified YLR135W SLX4 chromosome 12 12 413282 415528 W 1996-07-31 1996-07-31 Endonuclease involved in processing DNA during recombination and repair; cleaves branched structures in a complex with Slx1p; involved in Rad1p/Rad10p-dependent removal of 3'-nonhomologous tails during DSBR via single-strand annealing
S000031127 CDS YLR135W 12 413282 415528 W 1996-07-31 1996-07-31
S000004126 ORF Verified YLR136C TIS11 CTH2 chromosome 12 L000002895 12 416659 415802 C 1996-07-31 1996-07-31 mRNA-binding protein expressed during iron starvation; binds to a sequence element in the 3'-untranslated regions of specific mRNAs to mediate their degradation; involved in iron homeostasis
S000031183 CDS YLR136C 12 416659 415802 C 1996-07-31 1996-07-31
S000004127 ORF Uncharacterized YLR137W chromosome 12 12 417007 418110 W 1996-07-31 1996-07-31 Putative S-adenosylmethionine-dependent methyltransferase
S000031387 CDS YLR137W 12 417007 418110 W 1996-07-31 1996-07-31
S000004128 ORF Verified YLR138W NHA1 chromosome 12 L000004113 12 418438 421395 W 1996-07-31 1996-07-31 Na+/H+ antiporter involved in sodium and potassium efflux through the plasma membrane; required for alkali cation tolerance at acidic pH
S000032374 CDS YLR138W 12 418438 421395 W 1996-07-31 1996-07-31
S000004129 ORF Verified YLR139C SLS1 chromosome 12 L000002656 12 423474 421543 C 1996-07-31 1996-07-31 Mitochondrial membrane protein that coordinates expression of mitochondrially-encoded genes; may facilitate delivery of mRNA to membrane-bound translation machinery
S000032442 CDS YLR139C 12 423474 421543 C 1996-07-31 1996-07-31
S000004130 ORF Dubious YLR140W chromosome 12 12 423475 423801 W 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a functional protein; overlaps essential RRN5 gene which encodes a member of the UAF transcription factor involved in transcription of rDNA by RNA polymerase I
S000033242 CDS YLR140W 12 423475 423801 W 1996-07-31 1996-07-31
S000004131 ORF Verified YLR141W RRN5 chromosome 12 L000003261 12 423684 424775 W 1996-07-31 1996-07-31 Protein involved in transcription of rDNA by RNA polymerase I; transcription factor, member of UAF (upstream activation factor) family along with Rrn9p and Rrn10p
S000033304 CDS YLR141W 12 423684 424775 W 1996-07-31 1996-07-31
S000004132 ORF Verified YLR142W PUT1 chromosome 12 L000001535 12 425187 426617 W 73 1996-07-31 1996-07-31 Proline oxidase, nuclear-encoded mitochondrial protein involved in utilization of proline as sole nitrogen source; PUT1 transcription is induced by Put3p in the presence of proline and the absence of a preferred nitrogen source
S000033371 CDS YLR142W 12 425187 426617 W 1996-07-31 1996-07-31
S000006541 tRNA tD(GUC)L1 chromosome 12 L000003647 12 427133 427204 W 2000-05-19 2000-05-19 tRNA-Asp
S000031841 noncoding_exon tD(GUC)L1 12 427133 427204 W 2000-05-19 2000-05-19
S000004133 ORF Uncharacterized YLR143W chromosome 12 12 427330 429387 W 1996-07-31 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-tagged protein localizes to the cytoplasm; YLR143W is not an essential gene
S000034284 CDS YLR143W 12 427330 429387 W 1996-07-31 1996-07-31
S000004134 ORF Verified YLR144C ACF2 PCA1|ENG2 chromosome 12 L000004011 12 432017 429678 C 1996-07-31 1996-07-31 Intracellular beta-1,3-endoglucanase, expression is induced during sporulation; may have a role in cortical actin cytoskeleton assembly
S000034344 CDS YLR144C 12 432017 429678 C 1996-07-31 1996-07-31
S000004135 ORF Verified YLR145W RMP1 chromosome 12 12 432169 432774 W 1996-07-31 1996-07-31 Subunit of RNase MRP, which processes pre-rRNA and has a role in cell cycle-regulated degradation of daughter cell-specific mRNAs; unlike most subunits, not shared between RNase MRP and nuclear RNase P
S000034472 CDS YLR145W 12 432169 432774 W 1996-07-31 1996-07-31
S000004136 ORF Verified YLR146C SPE4 chromosome 12 L000004341 12 433726 432824 C 1996-07-31 1996-07-31 Spermine synthase, required for the biosynthesis of spermine and also involved in biosynthesis of pantothenic acid
S000034521 CDS YLR146C 12 433726 432824 C 1996-07-31 1996-07-31
S000113566 ORF Uncharacterized YLR146W-A chromosome 12 12 433871 434059 W 2005-11-17 2005-11-17 Putative protein of unknown function
S000113567 CDS YLR146W-A 12 433871 434059 W 2005-11-17 2005-11-17
S000004137 ORF Verified YLR147C SMD3 SLT16 chromosome 12 L000001929 12 434464 434159 C 1996-07-31 1996-07-31 Core Sm protein Sm D3; part of heteroheptameric complex (with Smb1p, Smd1p, Smd2p, Sme1p, Smx3p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm D3
S000035546 CDS YLR147C 12 434464 434159 C 1996-07-31 1996-07-31
S000004138 ORF Verified YLR148W PEP3 VPT18|VPS18|VAM8 chromosome 12 L000001374|L000002473 12 434642 437398 W 91 1996-07-31 1996-07-31 Component of CORVET tethering complex; vacuolar peripheral membrane protein that promotes vesicular docking/fusion reactions in conjunction with SNARE proteins, required for vacuolar biogenesis
S000035686 CDS YLR148W 12 434642 437398 W 1996-07-31 1996-07-31
S000004139 ORF Uncharacterized YLR149C chromosome 12 12 439824 437632 C 1996-07-31 1996-07-31 Putative protein of unknown function; overexpression causes a cell cycle delay or arrest; null mutation results in a decrease in plasma membrane electron transport; YLR149C is not an essential gene
S000035734 CDS YLR149C 12 439824 437632 C 1996-07-31 1996-07-31
S000007619 ORF Dubious YLR149C-A chromosome 12 12 440457 440371 C 2001-02-26 2001-02-26 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000037217 CDS YLR149C-A 12 440457 440371 C 2001-02-26 2001-02-26
S000004140 ORF Verified YLR150W STM1 MPT4 chromosome 12 L000002574 12 440468 441289 W 1996-07-31 1996-07-31 Protein required for optimal translation under nutrient stress; perturbs association of Yef3p with ribosomes; involved in TOR signaling; binds G4 quadruplex and purine motif triplex nucleic acid; helps maintain telomere structure
S000036485 CDS YLR150W 12 440468 441289 W 1996-07-31 1996-07-31
S000004141 ORF Verified YLR151C PCD1 chromosome 12 12 442738 441716 C 1996-07-31 1996-07-31 Peroxisomal nudix pyrophosphatase with specificity for coenzyme A and CoA derivatives, may function to remove potentially toxic oxidized CoA disulfide from peroxisomes to maintain the capacity for beta-oxidation of fatty acids
S000036493 CDS YLR151C 12 442738 441716 C 1996-07-31 1996-07-31
S000004142 ORF Uncharacterized YLR152C chromosome 12 12 444689 442959 C 1996-07-31 1996-07-31 Putative protein of unknown function; YLR152C is not an essential gene
S000036614 CDS YLR152C 12 444689 442959 C 1996-07-31 1996-07-31
S000004143 ORF Verified YLR153C ACS2 chromosome 12 L000003111 12 447576 445525 C 1996-07-31 1996-07-31 Acetyl-coA synthetase isoform which, along with Acs1p, is the nuclear source of acetyl-coA for histone acetylation; mutants affect global transcription; required for growth on glucose; expressed under anaerobic conditions
S000036713 CDS YLR153C 12 447576 445525 C 1996-07-31 1996-07-31
S000004144 ORF Verified YLR154C RNH203 chromosome 12 12 448315 447983 C 1996-07-31 1996-07-31 Ribonuclease H2 subunit, required for RNase H2 activity; related to human AGS3 that causes Aicardi-Goutieres syndrome
S000037436 CDS YLR154C 12 448315 447983 C 1996-07-31 1996-07-31
S000006699 tRNA tQ(UUG)L chromosome 12 L000003663 12 448722 448651 C 2000-05-19 2000-05-19 tRNA-Gln; thiolation of uridine at wobble position (34) requires Ncs6p
S000032585 noncoding_exon tQ(UUG)L 12 448722 448651 C 2000-05-19 2000-05-19
S000007084 long_terminal_repeat YLRWdelta6 chromosome 12 12 448843 449029 W 2000-05-19 2000-05-19 Ty1 LTR
S000118475 ARS ARS1216 ARSXII-451 chromosome 12 12 450486 450726 2006-08-30 2006-08-30 Autonomously Replicating Sequence
S000029718 rRNA ETS2-1 ETS2-1 3' ETS chromosome 12 12 451786 451576 C 2004-03-04 2004-03-04 Non-coding region located adjacent to and downstream of RDN25, transcribed as part of the 35S rRNA precursor transcript; contains the primary rRNA transcription termination site at +93 and a secondary termination site between +211 and +250
S000036854 external_transcribed_spacer_region ETS2-1 12 451786 451576 C 2004-03-04 2004-03-04
S000028675 ORF Dubious YLR154W-A YLR154W-C chromosome 12 12 452439 452624 W 2003-07-29 2003-07-29 Dubious open reading frame unlikely to encode a protein; encoded within the the 25S rRNA gene on the opposite strand
S000032525 CDS YLR154W-A 12 452439 452624 W 2003-07-29 2003-07-29
S000028563 ORF Dubious YLR154W-B chromosome 12 12 454393 454557 W 2003-07-29 2003-07-29 Dubious open reading frame unlikely to encode a protein; encoded within the the 25S rRNA gene on the opposite strand
S000031269 CDS YLR154W-B 12 454393 454557 W 2003-07-29 2003-07-29
S000028422 ORF Verified YLR154W-C TAR1 YLR154W-A chromosome 12 S000007646 12 454697 455071 W 2002-06-20 2002-06-20 Mitochondrial protein potentially involved in regulation of respiratory metabolism; interacts genetically with RPO41 and physically with Coq5p; encoded within the 25S rRNA gene on the opposite strand
S000029958 CDS YLR154W-C 12 454697 455071 W 2002-06-20 2002-06-20
S000006484 rRNA RDN25-1 RDN25-1 RDN25 chromosome 12 12 455182 451787 C 2000-05-19 2000-05-19 25S ribosomal RNA, component of the large (60S) ribosomal subunit; encoded in the rDNA repeat (RDN1) as part of the 35S primary transcript
S000032318 noncoding_exon RDN25-1 12 455182 451787 C 2000-05-19 2000-05-19
S000029716 rRNA ITS2-1 ITS2-1 ITS2 chromosome 12 12 455414 455183 C 2004-03-04 2004-03-04 Non-coding region between RDN58 and RDN25, that is transcribed as part of the 35S rRNA precursor transcript; forms a stem-loop structure that is required for processing of the precursor transcript
S000036852 internal_transcribed_spacer_region ITS2-1 12 455414 455183 C 2004-03-04 2004-03-04
S000028676 ORF Dubious YLR154W-E chromosome 12 12 455434 455637 W 2003-07-29 2003-07-29 Dubious open reading frame unlikely to encode a protein; encoded within the the 35S rRNA gene on the opposite strand
S000032527 CDS YLR154W-E 12 455434 455637 W 2003-07-29 2003-07-29
S000006488 rRNA RDN58-1 RDN58-1 RDN58 chromosome 12 12 455572 455415 C 2000-05-19 2000-05-19 5.8S ribosomal RNA, component of the 60S ribosomal subunit; encoded in the rDNA repeat (RDN1) as part of the 35S primary transcript; 3' end formation involves processing by the exosome complex while 5' end is generated by Kem1p and Rat1p
S000033911 noncoding_exon RDN58-1 12 455572 455415 C 2000-05-19 2000-05-19
S000028843 ORF Dubious YLR154W-F chromosome 12 12 455884 456024 W 2003-07-29 2003-07-29 Dubious open reading frame unlikely to encode a protein; encoded within the the 35S rRNA gene on the opposite strand
S000034528 CDS YLR154W-F 12 455884 456024 W 2003-07-29 2003-07-29
S000029715 rRNA ITS1-1 ITS1-1 ITS1 chromosome 12 12 455933 455573 C 2004-03-04 2004-03-04 Non-coding region between RDN58 and RDN18, that is transcribed as part of the 35S rRNA precursor transcript; excision during transcript maturation is coupled with processing of the 3' external transcribed spacer (3'ETS)
S000036841 internal_transcribed_spacer_region ITS1-1 12 455933 455573 C 2004-03-04 2004-03-04
S000006482 rRNA RDN18-1 RDN18-1 RDN18 chromosome 12 12 457733 455934 C 2000-05-19 2000-05-19 18S ribosomal RNA, component of the small (40S) ribosomal subunit; involved in codon recognition by tRNAs or the release factor eRF1 (Sup45p); encoded in the rDNA repeat (RDN1) as part of the 35S primary transcript
S000033329 noncoding_exon RDN18-1 12 457733 455934 C 2000-05-19 2000-05-19
S000006486 rRNA RDN37-1 RDN37-1 RDN37 chromosome 12 12 458433 451576 C 2004-04-07 2000-05-19 35S ribosomal RNA transcript, encoded by the RDN1 locus, that is processed into the 25S, 18S and 5.8S rRNAs (represented by the RDN25, RDN18, and RDN58 loci)
S000032929 external_transcribed_spacer_region RDN37-1 12 451786 451576 C 2004-04-07 2000-05-19
S000032923 external_transcribed_spacer_region RDN37-1 12 458433 457734 C 2004-04-07 2000-05-19
S000032927 internal_transcribed_spacer_region RDN37-1 12 455414 455183 C 2004-04-07 2000-05-19
S000032925 internal_transcribed_spacer_region RDN37-1 12 455933 455573 C 2004-04-07 2000-05-19
S000032928 noncoding_exon RDN37-1 12 455182 451787 C 2004-04-07 2000-05-19
S000032926 noncoding_exon RDN37-1 12 455572 455415 C 2004-04-07 2000-05-19
S000032924 noncoding_exon RDN37-1 12 457733 455934 C 2004-04-07 2000-05-19
S000029717 rRNA ETS1-1 ETS1-1 5' ETS chromosome 12 12 458433 457734 C 2004-03-04 2004-03-04 Non-coding region located immediately upstream of RDN18, that is transcribed as part of the 35S rRNA precursor transcript; contains an essential U3 snoRNA binding site required for maturation of 18S rRNA
S000036853 external_transcribed_spacer_region ETS1-1 12 458433 457734 C 2004-03-04 2004-03-04
S000120636 ARS ARS1200-1 ARSXII-459|ARS1216.5|rDNA ARS chromosome 12 12 458992 459098 2007-02-06 2007-02-06 Chromosomal origin of bidirectional DNA replication; an rDNA ARS is presumed to be present in each tandem rDNA repeat, but fewer than one-third of the rDNA ARSs are actually used as replication origins in a given S phase
S000120639 ARS consensus sequence ARS1200-1 12 459089 459079 C 2007-02-06 2007-02-06
S000029329 rRNA NTS2-1 NTS2-1 chromosome 12 L000003944 12 459676 458434 C 2003-12-09 2003-12-09 Nontranscribed region of the rDNA repeat, located between RND5 and the 5'ETS; contains RNA polymerase I termination site
S000032460 non_transcribed_region NTS2-1 12 459676 458434 C 2003-12-09 2003-12-09
S000006479 rRNA RDN5-1 RDN5-1 RDN5 chromosome 12 12 459677 459797 W 2000-05-19 2000-05-19 5S ribosomal RNA, component of the large (60S) ribosomal subunit; localized to the nucleolus via interaction with Rpl5p; may play a role in translational frame fidelity; transcription is mediated by PolIII and activated by TFIIIA and TFIIIE
S000031406 noncoding_exon RDN5-1 12 459677 459797 W 2000-05-19 2000-05-19
S000029714 rRNA NTS1-2 NTS1-2 NTS1 chromosome 12 12 460712 459798 C 2004-03-04 2004-03-04 Non-transcribed region of the rDNA repeat located between the 3' ETS and RDN5, required for rDNA repeat expansion
S000036840 non_transcribed_region NTS1-2 12 460712 459798 C 2004-03-04 2004-03-04
S000029713 rRNA ETS2-2 ETS2-2 3' ETS chromosome 12 12 460923 460713 C 2004-03-04 2004-03-04 Non-coding region located adjacent to RDN25, transcribed as part of the 35S rRNA precursor transcript; contains the primary rRNA transcription termination site at +93 and a secondary termination site between +211 and +250
S000036839 external_transcribed_spacer_region ETS2-2 12 460923 460713 C 2004-03-04 2004-03-04
S000028561 ORF Uncharacterized YLR154C-G chromosome 12 12 462672 462523 C 2003-07-29 2003-07-29 Putative protein of unknown function identified by fungal homology comparisons and RT-PCR; this ORF is contained within RDN25-2 and RDN37-2
S000031267 CDS YLR154C-G 12 462672 462523 C 2003-07-29 2003-07-29
S000006485 rRNA RDN25-2 RDN25-2 RDN25 chromosome 12 12 464319 460924 C 2000-05-19 2000-05-19 25S ribosomal RNA, component of the large (60S) ribosomal subunit; encoded in the rDNA repeat (RDN1) as part of the 35S primary transcript
S000032336 noncoding_exon RDN25-2 12 464319 460924 C 2000-05-19 2000-05-19
S000029712 rRNA ITS2-2 ITS2-2 ITS2 chromosome 12 12 464551 464320 C 2004-03-04 2004-03-04 Non-coding region between RDN58 and RDN25, transcribed as part of the 35S rRNA precursor transcript; forms a stem-loop structure required for processing of the precursor transcript
S000036837 internal_transcribed_spacer_region ITS2-2 12 464551 464320 C 2004-03-04 2004-03-04
S000006489 rRNA RDN58-2 RDN58-2 RDN58 chromosome 12 12 464709 464552 C 2000-05-19 2000-05-19 5.8S ribosomal RNA, component of the 60S ribosomal subunit; encoded in the rDNA repeat (RDN1)
S000033912 noncoding_exon RDN58-2 12 464709 464552 C 2000-05-19 2000-05-19
S000029709 rRNA ITS1-2 ITS1-2 ITS1 chromosome 12 12 465070 464710 C 2004-03-04 2004-03-04 Non-coding region between RDN58 and RDN18, transcribed as part of the 35S rRNA precursor transcript; excision during transcript maturation is coupled with processing of the 3' external transcribed spacer (3' ETS)
S000036833 internal_transcribed_spacer_region ITS1-2 12 465070 464710 C 2004-03-04 2004-03-04
S000006483 rRNA RDN18-2 RDN18-2 RDN18 chromosome 12 12 466870 465071 C 2000-05-19 2000-05-19 18S ribosomal RNA, component of the small (40S) ribosomal subunit; involved in codon recognition by tRNAs or the release factor eRF1 (Sup45p); encoded in the rDNA repeat (RDN1) as part of the 35S primary transcript
S000033332 noncoding_exon RDN18-2 12 466870 465071 C 2000-05-19 2000-05-19
S000006487 rRNA RDN37-2 RDN37-2 RDN37 chromosome 12 12 467570 460713 C 2004-04-07 2000-05-19 35S ribosomal RNA transcript, encoded by the RDN1 locus, that is processed into the 25S, 18S and 5.8S rRNAs (represented by the RDN25, RDN18, and RDN58 loci)
S000032939 external_transcribed_spacer_region RDN37-2 12 460923 460713 C 2004-04-07 2000-05-19
S000032933 external_transcribed_spacer_region RDN37-2 12 467570 466871 C 2004-04-07 2000-05-19
S000032937 internal_transcribed_spacer_region RDN37-2 12 464551 464320 C 2004-04-07 2000-05-19
S000032935 internal_transcribed_spacer_region RDN37-2 12 465070 464710 C 2004-04-07 2000-05-19
S000032938 noncoding_exon RDN37-2 12 464319 460924 C 2004-04-07 2000-05-19
S000032936 noncoding_exon RDN37-2 12 464709 464552 C 2004-04-07 2000-05-19
S000032934 noncoding_exon RDN37-2 12 466870 465071 C 2004-04-07 2000-05-19
S000029707 rRNA ETS1-2 ETS1-2 5' ETS chromosome 12 12 467570 466871 C 2004-03-04 2004-03-04 Non-coding region located immediately upstream of RDN18, transcribed as part of the 35S rRNA precursor transcript; contains an essential U3 snoRNA binding site required for maturation of 18S rRNA
S000036830 external_transcribed_spacer_region ETS1-2 12 467570 466871 C 2004-03-04 2004-03-04
S000120655 ARS ARS1200-2 ARSXII-468|rDNA ARS chromosome 12 12 468129 468235 2007-02-06 2007-02-06 Chromosomal origin of bidirectional DNA replication; an rDNA ARS is presumed to be present in each tandem rDNA repeat, but fewer than one-third of the rDNA ARSs are actually used as replication origins in a given S phase
S000120656 ARS consensus sequence ARS1200-2 12 468226 468216 C 2007-02-06 2007-02-06
S000029706 rRNA NTS2-2 NTS2-2 NTS2 chromosome 12 12 468813 467571 C 2004-03-04 2004-03-04 Non-transcribed region of the rDNA repeat, located between RDN5 and the 5' ETS
S000036829 non_transcribed_region NTS2-2 12 468813 467571 C 2004-03-04 2004-03-04
S000006480 rRNA RDN5-2 RDN5-2 RDN5 chromosome 12 12 468814 468932 W 2004-04-07 2000-05-19 5S ribosomal RNA, component of the large (60S) ribosomal subunit; localized to the nucleolus via interaction with Rpl5p; may play a role in translational frame fidelity; transcription is mediated by PolIII and activated by TFIIIA and TFIIIE
S000031412 noncoding_exon RDN5-2 12 468814 468932 W 2004-04-07 2000-05-19
S000028562 ORF Uncharacterized YLR154C-H chromosome 12 12 468959 468828 C 2003-07-29 2003-07-29 Putative protein of unknown function identified by fungal homology comparisons and RT-PCR; this ORF partially overlaps RND5-2
S000031268 CDS YLR154C-H 12 468959 468828 C 2003-07-29 2003-07-29
S000004145 ORF Verified YLR155C ASP3-1 ASP3 chromosome 12 L000000130 12 470406 469318 C 1996-07-31 1996-07-31 Cell-wall L-asparaginase II, involved in asparagine catabolism; expression is induced during nitrogen starvation; four copies of ASP3 are present in the genome reference strain S288C
S000037563 CDS YLR155C 12 470406 469318 C 1996-07-31 1996-07-31
S000004146 ORF Uncharacterized YLR156W chromosome 12 12 472114 472458 W 1996-07-31 1996-07-31 Putative protein of unknown function; exhibits a two-hybrid interaction with Jsn1p in a large-scale analysis
S000030409 CDS YLR156W 12 472114 472458 W 1996-07-31 1996-07-31
S000006481 rRNA RDN5-3 RDN5-3 RDN5 chromosome 12 12 472466 472584 W 2004-04-07 2000-05-19 5S ribosomal RNA, component of the large (60S) ribosomal subunit; localized to the nucleolus via interaction with Rpl5p; may play a role in translational frame fidelity; transcription is mediated by PolIII and activated by TFIIIA and TFIIIE
S000031417 noncoding_exon RDN5-3 12 472466 472584 W 2004-04-07 2000-05-19
S000028564 ORF Uncharacterized YLR156C-A chromosome 12 12 472611 472480 C 2003-07-29 2003-07-29 Putative protein of unknown function identified by fungal homology comparisons and RT-PCR; this ORF partially overlaps RND5-3
S000031270 CDS YLR156C-A 12 472611 472480 C 2003-07-29 2003-07-29
S000004147 ORF Verified YLR157C ASP3-2 ASP3 chromosome 12 12 474058 472970 C 1996-07-31 1996-07-31 Cell-wall L-asparaginase II, involved in asparagine catabolism; expression is induced during nitrogen starvation; four copies of ASP3 are present in the genome reference strain S288C
S000030487 CDS YLR157C 12 474058 472970 C 1996-07-31 1996-07-31
S000028677 ORF Uncharacterized YLR157W-D YLR157W-A chromosome 12 12 475765 475977 W 2003-07-29 2003-07-29 Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching
S000032531 CDS YLR157W-D 12 475765 475977 W 2003-07-29 2003-07-29
S000007068 long_terminal_repeat YLRCdelta7 chromosome 12 12 476311 475977 C 2000-05-19 2000-05-19 Ty1 LTR
S000007374 transposable_element_gene YLR157C-B chromosome 12 12 481602 476334 C 1999-07-17 1999-07-17 Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes
S000035905 CDS YLR157C-B 12 480296 476334 C 1999-07-17 1999-07-17
S000035904 CDS YLR157C-B 12 481602 480298 C 1999-07-17 1999-07-17
S000035906 plus_1_translational_frameshift YLR157C-B 12 480297 480297 C 1999-07-17 1999-07-17
S000007373 transposable_element_gene YLR157C-A chromosome 12 12 481602 480280 C 1999-07-17 1999-07-17 Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag
S000035900 CDS YLR157C-A 12 481602 480280 C 1999-07-17 1999-07-17
S000028678 ORF Uncharacterized YLR157W-E YLR157W-B|YLR157W-C chromosome 12 12 481874 482038 W 2003-07-29 2003-07-29 Putative protein of unknown function identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; partially overlaps a Ty1 element
S000032535 CDS YLR157W-E 12 481874 482038 W 2003-07-29 2003-07-29
S000007081 retrotransposon YLRCTy1-1 chromosome 12 12 481898 475977 C 2000-05-19 2000-05-19 Long Terminal Repeat (LTR) retrotransposon of the Copia (Pseudoviridae) group; contains co-transcribed genes TYA Gag and TYB Pol, encoding proteins involved in structure and function of virus-like particles, flanked by two direct repeats
S000007069 long_terminal_repeat YLRCdelta8 chromosome 12 12 481898 481564 C 2000-05-19 2000-05-19 Ty1 LTR
S000029708 rRNA RDN5-4 RDN5-4 RDN5 chromosome 12 12 482046 482164 W 2004-03-04 2004-03-04 5S ribosomal RNA, component of the large (60S) ribosomal subunit; localized to the nucleolus via interaction with Rpl5p; may play a role in translational frame fidelity; transcription is mediated by PolIII and activated by TFIIIA and TFIIIE
S000036831 noncoding_exon RDN5-4 12 482046 482164 W 2004-03-04 2004-03-04
S000028565 ORF Uncharacterized YLR157C-C chromosome 12 12 482191 482060 C 2003-07-29 2003-07-29 Putative protein of unknown function identified by fungal homology comparisons and RT-PCR; this ORF partially overlaps RND5-4
S000031271 CDS YLR157C-C 12 482191 482060 C 2003-07-29 2003-07-29
S000004148 ORF Verified YLR158C ASP3-3 ASP3 chromosome 12 12 483638 482550 C 1996-07-31 1996-07-31 Cell-wall L-asparaginase II, involved in asparagine catabolism; expression is induced during nitrogen starvation; four copies of ASP3 are present in the genome reference strain S288C
S000030598 CDS YLR158C 12 483638 482550 C 1996-07-31 1996-07-31
S000004149 ORF Uncharacterized YLR159W chromosome 12 12 485346 485690 W 1996-07-31 1996-07-31 Putative protein of unknown function; YLR156W, YLR159W, and YLR161W are three identical open reading frames encoded near the ribosomal DNA region of chromosome 12
S000031528 CDS YLR159W 12 485346 485690 W 1996-07-31 1996-07-31
S000029710 rRNA RDN5-5 RDN5-5 RDN5 chromosome 12 12 485698 485816 W 2004-03-04 2004-03-04 5S ribosomal RNA, component of the large (60S) ribosomal subunit; localized to the nucleolus via interaction with Rpl5p; may play a role in translational frame fidelity; transcription is mediated by PolIII and activated by TFIIIA and TFIIIE
S000036834 noncoding_exon RDN5-5 12 485698 485816 W 2004-03-04 2004-03-04
S000028566 ORF Uncharacterized YLR159C-A chromosome 12 12 485843 485712 C 2003-07-29 2003-07-29 Putative protein of unknown function identified by fungal homology comparisons and RT-PCR; this ORF partially overlaps RND5-5
S000031272 CDS YLR159C-A 12 485843 485712 C 2003-07-29 2003-07-29
S000004150 ORF Verified YLR160C ASP3-4 ASP3 chromosome 12 12 487290 486202 C 1996-07-31 1996-07-31 Cell-wall L-asparaginase II, involved in asparagine catabolism; expression is induced during nitrogen starvation; four copies of ASP3 are present in the genome reference strain S288C
S000031490 CDS YLR160C 12 487290 486202 C 1996-07-31 1996-07-31
S000004151 ORF Uncharacterized YLR161W chromosome 12 12 488998 489342 W 1996-07-31 1996-07-31 Putative protein of unknown function; YLR156W, YLR159W, and YLR161W are three identical open reading frames encoded near the ribosomal DNA region of chromosome 12
S000031592 CDS YLR161W 12 488998 489342 W 1996-07-31 1996-07-31
S000029711 rRNA RDN5-6 RDN5-6 RDN5 chromosome 12 12 489350 489470 W 2004-03-04 2004-03-04 5S ribosomal RNA, component of the large (60S) ribosomal subunit; localized to the nucleolus via interaction with Rpl5p; may play a role in translational frame fidelity; transcription is mediated by PolIII and activated by TFIIIA and TFIIIE
S000036835 noncoding_exon RDN5-6 12 489350 489470 W 2004-03-04 2004-03-04
S000004152 ORF Uncharacterized YLR162W chromosome 12 12 489574 489930 W 1996-07-31 1996-07-31 Putative protein of unknown function; overexpression confers resistance to the antimicrobial peptide MiAMP1
S000032571 CDS YLR162W 12 489574 489930 W 1996-07-31 1996-07-31
S000028567 ORF Uncharacterized YLR162W-A RRT15 chromosome 12 12 490407 490595 W 2003-07-29 2003-07-29 Putative protein of unknown function identified by fungal homology comparisons and RT-PCR; identified in a screen for mutants with decreased levels of rDNA transcription
S000031273 CDS YLR162W-A 12 490407 490595 W 2003-07-29 2003-07-29
S000028844 ORF Dubious YLR163W-A chromosome 12 12 492814 492927 W 2003-07-29 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data
S000034529 CDS YLR163W-A 12 492814 492927 W 2003-07-29 2003-07-29
S000004153 ORF Verified YLR163C MAS1 MIF1 chromosome 12 L000001026|L000001108 12 493256 491868 C 1996-07-31 1996-07-31 Smaller subunit of the mitochondrial processing protease (MPP), essential processing enzyme that cleaves the N-terminal targeting sequences from mitochondrially imported proteins
S000032649 CDS YLR163C 12 493256 491868 C 1996-07-31 1996-07-31
S000004154 ORF Verified YLR164W chromosome 12 12 493885 494391 W 1996-07-31 1996-07-31 Mitochondrial inner membrane of unknown function; similar to Tim18p and Sdh4p; expression induced by nitrogen limitation in a GLN3, GAT1-dependent manner
S000032792 CDS YLR164W 12 493885 494391 W 1996-07-31 1996-07-31
S000004155 ORF Verified YLR165C PUS5 chromosome 12 12 495260 494496 C 1996-07-31 1996-07-31 Pseudouridine synthase, catalyzes only the formation of pseudouridine (Psi)-2819 in mitochondrial 21S rRNA; not essential for viability
S000032861 CDS YLR165C 12 495260 494496 C 1996-07-31 1996-07-31
S000004156 ORF Verified YLR166C SEC10 chromosome 12 L000003428 12 498046 495431 C 1996-07-31 1996-07-31 Essential 100kDa subunit of the exocyst complex (Sec3p, Sec5p, Sec6p, Sec8p, Sec10p, Sec15p, Exo70p, and Exo84p), which has the essential function of mediating polarized targeting of secretory vesicles to active sites of exocytosis
S000033562 CDS YLR166C 12 498046 495431 C 1996-07-31 1996-07-31
S000004157 ORF Verified YLR167W RPS31 UBI3|RPS37 chromosome 12 L000001768|L000002413 12 498949 499407 W 1996-07-31 1996-07-31 Fusion protein that is cleaved to yield a ribosomal protein of the small (40S) subunit and ubiquitin; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; interacts genetically with translation factor eIF2B
S000033714 CDS YLR167W 12 498949 499407 W 1996-07-31 1996-07-31
S000004158 ORF Verified YLR168C UPS2 GEP1|AIM30|MSF1|MSF1' chromosome 12 12 500272 499580 C 1996-07-31 1996-07-31 Mitochondrial intermembrane space protein involved in regulation of mitochondrial cardiolipin and phosphatidylethanolamine levels; null has defects in mitochondrial morphology; similar to Ups1p, Ups3p and to human PRELI
S000033771 CDS YLR168C 12 500272 499580 C 1996-07-31 1996-07-31
S000004159 ORF Dubious YLR169W chromosome 12 12 500337 500690 W 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000034750 CDS YLR169W 12 500337 500690 W 1996-07-31 1996-07-31
S000004161 ORF Dubious YLR171W chromosome 12 12 500735 501124 W 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000035908 CDS YLR171W 12 500735 501124 W 1996-07-31 1996-07-31
S000004160 ORF Verified YLR170C APS1 YAP19 chromosome 12 L000002493 12 501051 500581 C 1996-07-31 1996-07-31 Small subunit of the clathrin-associated adaptor complex AP-1, which is involved in protein sorting at the trans-Golgi network; homolog of the sigma subunit of the mammalian clathrin AP-1 complex
S000035745 CDS YLR170C 12 501051 500581 C 1996-07-31 1996-07-31
S000004162 ORF Verified YLR172C DPH5 chromosome 12 L000000523 12 502164 501262 C 1996-07-31 1996-07-31 Methyltransferase required for synthesis of diphthamide, which is a modified histidine residue of translation elongation factor 2 (Eft1p or Eft2p); not essential for viability; GFP-Dph5p fusion protein localizes to the cytoplasm
S000035977 CDS YLR172C 12 502164 501262 C 1996-07-31 1996-07-31
S000004163 ORF Uncharacterized YLR173W chromosome 12 12 502423 504249 W 1996-07-31 1996-07-31 Putative protein of unknown function
S000036883 CDS YLR173W 12 502423 504249 W 1996-07-31 1996-07-31
S000004164 ORF Verified YLR174W IDP2 chromosome 12 L000002737 12 504593 505831 W 1996-07-31 1996-07-31 Cytosolic NADP-specific isocitrate dehydrogenase, catalyzes oxidation of isocitrate to alpha-ketoglutarate; levels are elevated during growth on non-fermentable carbon sources and reduced during growth on glucose
S000036934 CDS YLR174W 12 504593 505831 W 1996-07-31 1996-07-31
S000004165 ORF Verified YLR175W CBF5 chromosome 12 L000000223 12 506136 507587 W 1996-07-31 1996-07-31 Pseudouridine synthase catalytic subunit of box H/ACA small nucleolar ribonucleoprotein particles (snoRNPs), acts on both large and small rRNAs and on snRNA U2; mutations in human ortholog dyskerin cause the disorder dyskeratosis congenita
S000037702 CDS YLR175W 12 506136 507587 W 1996-07-31 1996-07-31
S000004166 ORF Verified YLR176C RFX1 CRT1 chromosome 12 L000004129 12 510234 507799 C 1996-07-31 1996-07-31 Major transcriptional repressor of DNA-damage-regulated genes, recruits repressors Tup1p and Cyc8p to their promoters; involved in DNA damage and replication checkpoint pathway; similar to a family of mammalian DNA binding RFX1-4 proteins
S000037720 CDS YLR176C 12 510234 507799 C 1996-07-31 1996-07-31
S000004167 ORF Uncharacterized YLR177W chromosome 12 12 511056 512942 W 1996-07-31 1996-07-31 Putative protein of unknown function; phosphorylated by Dbf2p-Mob1p in vitro; some strains contain microsatellite polymophisms at this locus; YLR177W is not an essential gene
S000037859 CDS YLR177W 12 511056 512942 W 1996-07-31 1996-07-31
S000118476 ARS ARS1217 ARSXII-513 chromosome 12 12 512869 513117 2006-08-30 2006-08-30 Autonomously Replicating Sequence
S000004168 ORF Verified YLR178C TFS1 DKA1 chromosome 12 L000002291 12 513823 513164 C 124 1996-07-31 1996-07-31 Protein that interacts with and inhibits carboxypeptidase Y and Ira2p; phosphatidylethanolamine-binding protein (PEBP) family member; targets to vacuolar membranes during stationary phase; acetylated by NatB N-terminal acetyltransferase
S000037879 CDS YLR178C 12 513823 513164 C 1996-07-31 1996-07-31
S000004169 ORF Verified YLR179C chromosome 12 12 514715 514110 C 1996-07-31 1996-07-31 Protein of unknown function with similarity to Tfs1p; transcription is activated by paralogous proteins Yrm1p and Yrr1p along with proteins involved in multidrug resistance; GFP-tagged protein localizes to the cytoplasm and nucleus
S000030817 CDS YLR179C 12 514715 514110 C 1996-07-31 1996-07-31
S000004170 ORF Verified YLR180W SAM1 ETH10 chromosome 12 L000001798 12 515264 516412 W 1996-07-31 1996-07-31 S-adenosylmethionine synthetase, catalyzes transfer of the adenosyl group of ATP to the sulfur atom of methionine; one of two differentially regulated isozymes (Sam1p and Sam2p)
S000031889 CDS YLR180W 12 515264 516412 W 1996-07-31 1996-07-31
S000004171 ORF Verified YLR181C VTA1 chromosome 12 12 517672 516680 C 1996-07-31 1996-07-31 Multivesicular body (MVB) protein involved in endosomal protein sorting; regulates Vps4p activity by promoting its oligomerization; has an N-terminal Vps60- and Did2- binding domain, a linker region, and a C-terminal Vps4p binding domain
S000031945 CDS YLR181C 12 517672 516680 C 1996-07-31 1996-07-31
S000004172 ORF Verified YLR182W SWI6 SDS11|PSL8 chromosome 12 L000002254 12 517942 520353 W 1996-07-31 1996-07-31 Transcription cofactor, forms complexes with DNA-binding proteins Swi4p and Mbp1p to regulate transcription at the G1/S transition; involved in meiotic gene expression; localization regulated by phosphorylation; potential Cdc28p substrate
S000032961 CDS YLR182W 12 517942 520353 W 1996-07-31 1996-07-31
S000004173 ORF Verified YLR183C TOS4 chromosome 12 12 522014 520545 C 1996-07-31 1996-07-31 Forkhead Associated domain containing protein and putative transcription factor found associated with chromatin; target of SBF transcription factor; expression is periodic and peaks in G1; similar to PLM2
S000032995 CDS YLR183C 12 522014 520545 C 1996-07-31 1996-07-31
S000004174 ORF Dubious YLR184W chromosome 12 12 522108 522455 W 1996-07-31 1996-07-31 Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000033139 CDS YLR184W 12 522108 522455 W 1996-07-31 1996-07-31
S000004175 ORF Verified YLR185W RPL37A chromosome 12 L000002884 12 522665 523290 W 1996-07-31 1996-07-31 Protein component of the large (60S) ribosomal subunit, has similarity to Rpl37Bp and to rat L37 ribosomal protein
S000033905 CDS YLR185W 12 522665 522671 W 1996-07-31 1996-07-31
S000033906 CDS YLR185W 12 523031 523290 W 1996-07-31 1996-07-31
S000033907 intron YLR185W 12 522672 523030 W 1996-07-31 1996-07-31
S000004176 ORF Verified YLR186W EMG1 NEP1 chromosome 12 12 523634 524392 W 1996-07-31 1996-07-31 Member of the alpha/beta knot fold methyltransferase superfamily; required for maturation of 18S rRNA and for 40S ribosome production; interacts with RNA and with S-adenosylmethionine; associates with spindle/microtubules; forms homodimers
S000034031 CDS YLR186W 12 523634 524392 W 1996-07-31 1996-07-31
S000004177 ORF Uncharacterized YLR187W SKG3 chromosome 12 12 524867 527947 W 1996-07-31 1996-07-31 Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery, cytoplasm, bud, and bud neck; potential Cdc28p substrate; similar to Caf120p and Skg4p
S000034134 CDS YLR187W 12 524867 527947 W 1996-07-31 1996-07-31
S000004178 ORF Verified YLR188W MDL1 chromosome 12 L000001049 12 528302 530389 W 1996-07-31 1996-07-31 Mitochondrial inner membrane half-type ATP-binding cassette (ABC) transporter, mediates export of peptides generated upon proteolysis of mitochondrial proteins, plays a role in the regulation of cellular resistance to oxidative stress
S000034239 CDS YLR188W 12 528302 530389 W 1996-07-31 1996-07-31
S000004179 ORF Verified YLR189C ATG26 UGT51 chromosome 12 L000004808 12 534395 530799 C 1996-07-31 1996-07-31 UDP-glucose:sterol glucosyltransferase, conserved enzyme involved in synthesis of sterol glucoside membrane lipids; in contrast to ATG26 from P. pastoris, S. cerevisiae ATG26 is not involved in autophagy
S000035108 CDS YLR189C 12 534395 530799 C 1996-07-31 1996-07-31
S000004180 ORF Verified YLR190W MMR1 chromosome 12 12 535216 536691 W 1996-07-31 1996-07-31 Phosphorylated protein of the mitochondrial outer membrane, localizes only to mitochondria of the bud; interacts with Myo2p to mediate mitochondrial distribution to buds; mRNA is targeted to the bud via the transport system involving She2p
S000036058 CDS YLR190W 12 535216 536691 W 1996-07-31 1996-07-31
S000004181 ORF Verified YLR191W PEX13 PAS20 chromosome 12 L000003024 12 537274 538434 W 1996-07-31 1996-07-31 Integral peroxisomal membrane required for the translocation of peroxisomal matrix proteins, interacts with the PTS1 signal recognition factor Pex5p and the PTS2 signal recognition factor Pex7p, forms a complex with Pex14p and Pex17p
S000036199 CDS YLR191W 12 537274 538434 W 1996-07-31 1996-07-31
S000004182 ORF Verified YLR192C HCR1 chromosome 12 S000007439 12 539591 538794 C 1996-07-31 1996-07-31 Dual function protein involved in translation initiation as a substoichiometric component (eIF3j) of translation initiation factor 3 (eIF3) and required for processing of 20S pre-rRNA; binds to eIF3 subunits Rpg1p and Prt1p and 18S rRNA
S000036241 CDS YLR192C 12 539591 538794 C 1996-07-31 1996-07-31
S000004183 ORF Verified YLR193C UPS1 chromosome 12 12 540538 540011 C 1996-07-31 1996-07-31 Mitochondrial intermembrane space protein that regulates mitochondrial cardiolipin levels, null has defects in Mgm1p processing, integrity of mitochondrial inner membrane complexes, and mitochondrial morphology; ortholog of human PRELI
S000031730 CDS YLR193C 12 540538 540011 C 1996-07-31 1996-07-31
S000004184 ORF Uncharacterized YLR194C chromosome 12 12 541575 540811 C 1996-07-31 1996-07-31 Structural constituent of the cell wall attached to the plasma membrane by a GPI-anchor; expression is upregulated in response to cell wall stress
S000031877 CDS YLR194C 12 541575 540811 C 1996-07-31 1996-07-31
S000004185 ORF Verified YLR195C NMT1 CDC72 chromosome 12 L000001259 12 543306 541939 C 142 1996-07-31 1996-07-31 N-myristoyl transferase, catalyzes the cotranslational, covalent attachment of myristic acid to the N-terminal glycine residue of several proteins involved in cellular growth and signal transduction
S000031996 CDS YLR195C 12 543306 541939 C 1996-07-31 1996-07-31
S000004186 ORF Verified YLR196W PWP1 chromosome 12 L000001539 12 543970 545700 W 1996-07-31 1996-07-31 Protein with WD-40 repeats involved in rRNA processing; associates with trans-acting ribosome biogenesis factors; similar to beta-transducin superfamily
S000037527 CDS YLR196W 12 543970 545700 W 1996-07-31 1996-07-31
S000004187 ORF Verified YLR197W NOP56 SIK1 chromosome 12 L000002982 12 546099 547613 W 1996-07-31 1996-07-31 Essential evolutionarily-conserved nucleolar protein component of the box C/D snoRNP complexes that direct 2'-O-methylation of pre-rRNA during its maturation; overexpression causes spindle orientation defects
S000037605 CDS YLR197W 12 546099 547613 W 1996-07-31 1996-07-31
S000004188 ORF Dubious YLR198C chromosome 12 12 547647 547288 C 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene SIK1/YLR197W
S000037636 CDS YLR198C 12 547647 547288 C 1996-07-31 1996-07-31
S000004189 ORF Verified YLR199C PBA1 POC1 chromosome 12 12 548771 547855 C 2003-09-27 2003-09-27|1996-07-31 Protein involved in 20S proteasome assembly; forms a heterodimer with Add66p that binds to proteasome precursors; similar to human PAC1 constituent of the PAC1-PAC2 complex involved in proteasome assembly
S000030462 CDS YLR199C 12 548679 547855 C 2003-09-27 2003-09-27|1996-07-31
S000030461 CDS YLR199C 12 548771 548766 C 2003-09-27 2003-09-27
S000030463 intron YLR199C 12 548765 548680 C 2003-09-27 2003-09-27
S000004190 ORF Verified YLR200W YKE2 PFD6|GIM1 chromosome 12 L000002791 12 549014 549358 W 1996-07-31 1996-07-31 Subunit of the heterohexameric Gim/prefoldin protein complex involved in the folding of alpha-tubulin, beta-tubulin, and actin
S000036300 CDS YLR200W 12 549014 549358 W 1996-07-31 1996-07-31
S000004191 ORF Verified YLR201C COQ9 FMP53 chromosome 12 12 550295 549513 C 1996-07-31 1996-07-31 Protein required for ubiquinone (coenzyme Q) biosynthesis and respiratory growth; localizes to the matrix face of the mitochondrial inner membrane in a large complex with ubiquinone biosynthetic enzymes
S000036362 CDS YLR201C 12 550295 549513 C 1996-07-31 1996-07-31
S000004192 ORF Dubious YLR202C chromosome 12 12 550638 550196 C 1996-07-31 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YLR201C; ORF contains a putative intron
S000037015 CDS YLR202C 12 550460 550196 C 1996-07-31 1996-07-31
S000037014 CDS YLR202C 12 550638 550577 C 1996-07-31 1996-07-31
S000037016 intron YLR202C 12 550576 550461 C 1996-07-31 1996-07-31
S000004193 ORF Verified YLR203C MSS51 chromosome 12 L000001205 12 551962 550652 C 149 1996-07-31 1996-07-31 Specific translational activator for the mitochondrial COX1 mRNA; loosely associated with the matrix face of the mitochondrial inner membrane; influences both COX1 mRNA translation and Cox1p assembly into cytochrome c oxidase
S000037086 CDS YLR203C 12 551962 550652 C 1996-07-31 1996-07-31
S000004194 ORF Verified YLR204W QRI5 COX24 chromosome 12 L000001551 12 552272 552607 W 1996-07-31 1996-07-31 Mitochondrial inner membrane protein, required for accumulation of spliced COX1 mRNA; may have an additional role in translation of COX1 mRNA
S000037241 CDS YLR204W 12 552272 552607 W 1996-07-31 1996-07-31
S000004195 ORF Verified YLR205C HMX1 chromosome 12 12 553679 552726 C 2004-02-05 2004-02-05|1996-07-31 ER localized, heme-binding peroxidase involved in the degradation of heme; does not exhibit heme oxygenase activity despite similarity to heme oxygenases; expression regulated by AFT1
S000037310 CDS YLR205C 12 553679 552726 C 2004-02-05 2004-02-05|1996-07-31
S000004196 ORF Verified YLR206W ENT2 chromosome 12 12 554580 556421 W 2004-02-05 1996-07-31 Epsin-like protein required for endocytosis and actin patch assembly and functionally redundant with Ent1p; contains clathrin-binding motif at C-terminus
S000030027 CDS YLR206W 12 554580 556421 W 2004-02-05 1996-07-31
S000004197 ORF Verified YLR207W HRD3 chromosome 12 L000003040 12 556790 559291 W 2004-02-05 1996-07-31 Resident protein of the ER membrane that plays a central role in ER-associated protein degradation (ERAD), forms HRD complex with Hrd1p and ERAD determinants that engages in lumen to cytosol communication and coordination of ERAD events
S000030185 CDS YLR207W 12 556790 559291 W 2004-02-05 1996-07-31
S000004198 ORF Verified YLR208W SEC13 ANU3 chromosome 12 L000001838 12 559553 560446 W 2004-02-05 1996-07-31 Component of both the Nup84 nuclear pore sub-complex and the Sec13p-Sec31p complex of the COPII vesicle coat, required for vesicle formation in ER to Golgi transport and nuclear pore complex organization
S000031129 CDS YLR208W 12 559553 560446 W 2004-02-05 1996-07-31
S000004199 ORF Verified YLR209C PNP1 chromosome 12 12 561734 560799 C 2004-02-05 1996-07-31 Purine nucleoside phosphorylase, specifically metabolizes inosine and guanosine nucleosides; involved in the nicotinamide riboside salvage pathway
S000031185 CDS YLR209C 12 561734 560799 C 2004-02-05 1996-07-31
S000004200 ORF Verified YLR210W CLB4 chromosome 12 L000000352 12 562010 563392 W 2004-02-05 1996-07-31 B-type cyclin involved in cell cycle progression; activates Cdc28p to promote the G2/M transition; may be involved in DNA replication and spindle assembly; accumulates during S phase and G2, then targeted for ubiquitin-mediated degradation
S000032220 CDS YLR210W 12 562010 563392 W 2004-02-05 1996-07-31
S000004201 ORF Uncharacterized YLR211C chromosome 12 12 564533 563794 C 2004-02-05 2000-07-14|1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLR211C is not an essential gene; ORF contains an intron
S000032247 CDS YLR211C 12 564456 563794 C 2004-02-05 2000-07-14|1996-07-31
S000032246 CDS YLR211C 12 564533 564516 C 2004-02-05 2000-07-14
S000032248 intron YLR211C 12 564515 564457 C 2004-02-05 2000-07-14
S000004202 ORF Verified YLR212C TUB4 chromosome 12 L000002751 12 566283 564862 C 2004-02-05 1996-07-31 Gamma-tubulin, involved in nucleating microtubules from both the cytoplasmic and nuclear faces of the spindle pole body
S000032353 CDS YLR212C 12 566283 564862 C 2004-02-05 1996-07-31
S000004203 ORF Verified YLR213C CRR1 chromosome 12 S000007422 12 567924 566656 C 2004-02-05 1996-07-31 Putative glycoside hydrolase of the spore wall envelope; required for normal spore wall assembly, possibly for cross-linking between the glucan and chitosan layers; expressed during sporulation
S000033218 CDS YLR213C 12 567924 566656 C 2004-02-05 1996-07-31
S000004204 ORF Verified YLR214W FRE1 chromosome 12 L000000626 12 568569 570629 W 2004-02-05 1996-07-31 Ferric reductase and cupric reductase, reduces siderophore-bound iron and oxidized copper prior to uptake by transporters; expression induced by low copper and iron levels
S000033306 CDS YLR214W 12 568569 570629 W 2004-02-05 1996-07-31
S000004205 ORF Verified YLR215C CDC123 chromosome 12 12 571860 570778 C 2004-02-05 1996-07-31 Protein involved in nutritional control of the cell cycle; regulates abundance of the translation initiation factor eIF2; ortholog of human D123 protein
S000033348 CDS YLR215C 12 571860 570778 C 2004-02-05 1996-07-31
S000004207 ORF Dubious YLR217W chromosome 12 12 572911 573234 W 2004-02-05 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene CPR6
S000034392 CDS YLR217W 12 572911 573234 W 2004-02-05 1996-07-31
S000004206 ORF Verified YLR216C CPR6 CYP40 chromosome 12 L000003229 12 573213 572098 C 2004-02-05 1996-07-31 Peptidyl-prolyl cis-trans isomerase (cyclophilin), catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; binds to Hsp82p and contributes to chaperone activity
S000033434 CDS YLR216C 12 573213 572098 C 2004-02-05 1996-07-31
S000004208 ORF Verified YLR218C CMC3 chromosome 12 12 573920 573468 C 2004-02-05 1996-07-31 Protein that localizes to the mitochondrial intermembrane space via the Mia40p-Erv1p system; mutants exhibit glycogen storage defects and growth defects on a non-fermentable carbon source; contains twin cysteine-x9-cysteine motifs
S000034416 CDS YLR218C 12 573920 573468 C 2004-02-05 1996-07-31
S000004209 ORF Verified YLR219W MSC3 chromosome 12 12 574153 576339 W 2004-02-05 1996-07-31 Protein of unknown function, green fluorescent protein (GFP)-fusion protein localizes to the cell periphery; msc3 mutants are defective in directing meiotic recombination events to homologous chromatids; potential Cdc28p substrate
S000035498 CDS YLR219W 12 574153 576339 W 2004-02-05 1996-07-31
S000004210 ORF Verified YLR220W CCC1 chromosome 12 L000000234 12 576827 577795 W 2004-02-05 1996-07-31 Putative vacuolar Fe2+/Mn2+ transporter; suppresses respiratory deficit of yfh1 mutants, which lack the ortholog of mammalian frataxin, by preventing mitochondrial iron accumulation
S000035447 CDS YLR220W 12 576827 577795 W 2004-02-05 1996-07-31
S000004211 ORF Verified YLR221C RSA3 chromosome 12 12 579026 578364 C 2004-02-05 1996-07-31 Protein with a likely role in ribosomal maturation, required for accumulation of wild-type levels of large (60S) ribosomal subunits; binds to the helicase Dbp6p in pre-60S ribosomal particles in the nucleolus
S000035470 CDS YLR221C 12 579026 578364 C 2004-02-05 1996-07-31
S000004212 ORF Verified YLR222C UTP13 chromosome 12 12 581773 579320 C 2004-02-05 1996-07-31 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA
S000035533 CDS YLR222C 12 581773 579320 C 2004-02-05 1996-07-31
S000028568 ORF Dubious YLR222C-A chromosome 12 12 582238 582008 C 2004-02-05 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene IFH1
S000031274 CDS YLR222C-A 12 582238 582008 C 2004-02-05 2003-07-29
S000004213 ORF Verified YLR223C IFH1 chromosome 12 L000001775 12 585492 582235 C 2004-02-05 1996-07-31 Essential protein with a highly acidic N-terminal domain; IFH1 exhibits genetic interactions with FHL1, overexpression interferes with silencing at telomeres and HM loci; potential Cdc28p substrate
S000036449 CDS YLR223C 12 585492 582235 C 2004-02-05 1996-07-31
S000004214 ORF Uncharacterized YLR224W chromosome 12 12 586466 587575 W 2004-02-05 1996-07-31 F-box protein and component of SCF ubiquitin ligase complexes involved in ubiquitin-dependent protein catabolism; readily monoubiquitinated in vitro by SCF-Ubc4 complexes; YLR224W is not an essential gene
S000036572 CDS YLR224W 12 586466 587575 W 2004-02-05 1996-07-31
S000004215 ORF Uncharacterized YLR225C chromosome 12 12 588920 587697 C 2004-02-05 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLR225C is not an essential gene
S000036615 CDS YLR225C 12 588920 587697 C 2004-02-05 1996-07-31
S000004216 ORF Verified YLR226W BUR2 CST4 chromosome 12 L000002994|L000000205 12 589356 590543 W 2004-02-05 1996-07-31 Cyclin for the Sgv1p (Bur1p) protein kinase; Sgv1p and Bur2p comprise a CDK-cyclin complex involved in transcriptional regulation through its phosphorylation of the carboxy-terminal domain of the largest subunit of RNA polymerase II
S000037389 CDS YLR226W 12 589356 590543 W 2004-02-05 1996-07-31
S000004217 ORF Verified YLR227C ADY4 chromosome 12 S000007652 12 592045 590564 C 2004-02-05 1996-07-31 Structural component of the meiotic outer plaque, which is a membrane-organizing center that assembles on the cytoplasmic face of the spindle pole body during meiosis II and triggers the formation of the prospore membrane
S000037438 CDS YLR227C 12 592045 590564 C 2004-02-05 1996-07-31
S000006655 tRNA tL(UAG)L1 chromosome 12 L000003662 12 592621 592521 C 2004-02-05 2000-05-19 tRNA-Leu
S000035002 intron tL(UAG)L1 12 592583 592565 C 2004-02-05 2000-05-19
S000035001 noncoding_exon tL(UAG)L1 12 592564 592521 C 2004-02-05 2000-05-19
S000035000 noncoding_exon tL(UAG)L1 12 592621 592584 C 2004-02-05 2000-05-19
S000007070 long_terminal_repeat YLRCdelta9 chromosome 12 12 593037 592708 C 2004-02-05 2000-05-19 Ty1 LTR
S000007098 retrotransposon YLRWTy1-2 chromosome 12 12 593147 599064 W 2004-02-05 2000-05-19 Long Terminal Repeat (LTR) retrotransposon of the Copia (Pseudoviridae) group; contains co-transcribed genes TYA Gag and TYB Pol, encoding proteins involved in structure and function of virus-like particles, flanked by two direct repeats
S000007085 long_terminal_repeat YLRWdelta10 chromosome 12 12 593147 593480 W 2004-02-05 2000-05-19 Ty1 LTR
S000007375 transposable_element_gene YLR227W-A chromosome 12 12 593440 594762 W 2004-02-05 1996-07-31 Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag
S000035724 CDS YLR227W-A 12 593440 594762 W 2004-02-05 1996-07-31
S000007376 transposable_element_gene YLR227W-B chromosome 12 12 593440 598708 W 2004-02-05 1999-07-17 Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes
S000035730 CDS YLR227W-B 12 593440 594744 W 2004-02-05 1999-07-17
S000035731 CDS YLR227W-B 12 594746 598708 W 2004-02-05 1999-07-17
S000035732 plus_1_translational_frameshift YLR227W-B 12 594745 594745 W 2004-02-05 1999-07-17
S000007086 long_terminal_repeat YLRWdelta11 chromosome 12 12 598731 599064 W 2004-02-05 2000-05-19 Ty1 LTR
S000007087 long_terminal_repeat YLRWdelta12 chromosome 12 12 599270 599546 W 2004-02-05 2000-05-19 Ty1 LTR
S000007080 long_terminal_repeat YLRCtau1 chromosome 12 12 599846 599572 C 2004-02-05 2000-05-19 Ty4 LTR
S000004218 ORF Verified YLR228C ECM22 chromosome 12 L000004375 12 602465 600021 C 2004-02-05 1996-07-31 Sterol regulatory element binding protein, regulates transcription of sterol biosynthetic genes; contains Zn[2]-Cys[6] binuclear cluster; homologous to Upc2p; relocates from intracellular membranes to perinuclear foci on sterol depletion
S000037567 CDS YLR228C 12 602465 600021 C 2004-02-05 1996-07-31
S000118477 ARS ARS1218 ARSXII-603 chromosome 12 12 602941 603157 2006-08-30 2006-08-30 Autonomously Replicating Sequence
S000004220 ORF Dubious YLR230W chromosome 12 12 604576 604881 W 2004-02-05 1996-07-31 Dubious open reading frame unlikely to encode a functional protein; overlaps 5' end of essential CDC42 gene which encodes a small Rho-like GTPase essential for establishment and maintenance of cell polarity
S000030492 CDS YLR230W 12 604576 604881 W 2004-02-05 1996-07-31
S000004219 ORF Verified YLR229C CDC42 chromosome 12 L000000276 12 604789 604214 C 165 2004-02-05 1996-07-31 Small rho-like GTPase, essential for establishment and maintenance of cell polarity; mutants have defects in the organization of actin and septins
S000030359 CDS YLR229C 12 604789 604214 C 2004-02-05 1996-07-31
S000006614 tRNA tI(UAU)L chromosome 12 L000003661 12 605434 605302 C 2004-02-05 2000-05-19 tRNA-Ile
S000035162 intron tI(UAU)L 12 605397 605338 C 2004-02-05 2000-05-19
S000035161 noncoding_exon tI(UAU)L 12 605337 605302 C 2004-02-05 2000-05-19
S000035160 noncoding_exon tI(UAU)L 12 605434 605398 C 2004-02-05 2000-05-19
S000004222 ORF Dubious YLR232W chromosome 12 12 606832 607179 W 2004-02-05 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene BNA5
S000031460 CDS YLR232W 12 606832 607179 W 2004-02-05 1996-07-31
S000004221 ORF Verified YLR231C BNA5 chromosome 12 12 607121 605760 C 2004-02-05 1996-07-31 Kynureninase, required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expression regulated by Hst1p
S000031316 CDS YLR231C 12 607121 605760 C 2004-02-05 1996-07-31
S000004223 ORF Verified YLR233C EST1 chromosome 12 L000000588 12 609526 607427 C 2004-02-05 1996-07-31 TLC1 RNA-associated factor involved in telomere length regulation as the recruitment subunit of the telomerase holoenzyme, has a possible role in activating Est2p-TLC1-RNA bound to the telomere
S000031492 CDS YLR233C 12 609526 607427 C 2004-02-05 1996-07-31
S000004224 ORF Verified YLR234W TOP3 EDR1 chromosome 12 L000002321 12 609785 611755 W 163 2004-02-05 1996-07-31 DNA Topoisomerase III, conserved protein that functions in a complex with Sgs1p and Rmi1p to relax single-stranded negatively-supercoiled DNA preferentially, involved in telomere stability and regulation of mitotic recombination
S000031598 CDS YLR234W 12 609785 611755 W 2004-02-05 1996-07-31
S000004225 ORF Dubious YLR235C chromosome 12 12 611932 611534 C 2004-02-05 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene TOP3
S000031634 CDS YLR235C 12 611932 611534 C 2004-02-05 1996-07-31
S000004226 ORF Dubious YLR236C chromosome 12 12 612119 611796 C 2004-02-05 1996-07-31 Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000032651 CDS YLR236C 12 612119 611796 C 2004-02-05 1996-07-31
S000004227 ORF Verified YLR237W THI7 THI10 chromosome 12 L000003514 12 612369 614165 W 2004-02-05 1996-07-31 Plasma membrane transporter responsible for the uptake of thiamine, member of the major facilitator superfamily of transporters; mutation of human ortholog causes thiamine-responsive megaloblastic anemia
S000032815 CDS YLR237W 12 612369 614165 W 2004-02-05 1996-07-31
S000004228 ORF Verified YLR238W FAR10 chromosome 12 12 614757 616193 W 2004-02-05 1996-07-31 Protein involved in recovery from cell cycle arrest in response to pheromone, in a Far1p-independent pathway; interacts with Far3p, Far7p, Far8p, Far9p, and Far11p; potential Cdc28p substrate
S000033527 CDS YLR238W 12 614757 616193 W 2004-02-05 1996-07-31
S000004229 ORF Verified YLR239C LIP2 chromosome 12 12 617320 616334 C 2004-02-05 1996-07-31 Lipoyl ligase, involved in the modification of mitochondrial enzymes by the attachment of lipoic acid groups
S000033564 CDS YLR239C 12 617320 616334 C 2004-02-05 1996-07-31
S000004230 ORF Verified YLR240W VPS34 VPS7|STT8|VPT29|VPL7|PEP15|END12 chromosome 12 L000002476 12 617535 620162 W 2004-02-05 1996-07-31 Phosphatidylinositol 3-kinase responsible for the synthesis of phosphatidylinositol 3-phosphate; forms membrane-associated signal transduction complex with Vps15p to regulate protein sorting; activated by the GTP-bound form of Gpa1p
S000034710 CDS YLR240W 12 617535 620162 W 2004-02-05 1996-07-31
S000004231 ORF Uncharacterized YLR241W chromosome 12 12 620475 622823 W 2004-02-05 1996-07-31 Putative protein of unknown function, may be involved in detoxification
S000035645 CDS YLR241W 12 620475 622823 W 2004-02-05 1996-07-31
S000130183 ARS ARS1219 chromosome 12 12 623200 623863 2009-05-08 2009-05-08 Putative replication origin, identified in multiple array studies, not yet confirmed by plasmid-based assay
S000004232 ORF Verified YLR242C ARV1 chromosome 12 L000003505 12 623885 622920 C 2004-02-05 1996-07-31 Protein functioning in transport of glycosylphosphatidylinositol intermediates into the ER lumen; required for normal intracellular sterol distribution and for sphingolipid metabolism; similar to Nup120p and C. elegans R05H5.5 protein
S000035677 CDS YLR242C 12 623885 622920 C 2004-02-05 1996-07-31
S000004233 ORF Uncharacterized YLR243W chromosome 12 12 624205 625023 W 2004-02-05 1996-07-31 Putative protein of unknown function; YLR243W is an essential gene
S000035796 CDS YLR243W 12 624205 625023 W 2004-02-05 1996-07-31
S000004234 ORF Verified YLR244C MAP1 chromosome 12 L000001025 12 626333 625170 C 2004-02-05 1996-07-31 Methionine aminopeptidase, catalyzes the cotranslational removal of N-terminal methionine from nascent polypeptides; function is partially redundant with that of Map2p
S000035829 CDS YLR244C 12 626333 625170 C 2004-02-05 1996-07-31
S000004235 ORF Verified YLR245C CDD1 chromosome 12 L000004644 12 626932 626504 C 2004-02-05 1996-07-31 Cytidine deaminase; catalyzes the modification of cytidine to uridine in vitro but native RNA substrates have not been identified, localizes to both the nucleus and cytoplasm
S000035981 CDS YLR245C 12 626932 626504 C 2004-02-05 1996-07-31
S000004236 ORF Verified YLR246W ERF2 chromosome 12 12 627120 628199 W 2004-02-05 1996-07-31 Subunit of a palmitoyltransferase, composed of Erf2p and Shr5p, that adds a palmitoyl lipid moiety to heterolipidated substrates such as Ras1p and Ras2p through a thioester linkage; mutants partially mislocalize Ras2p to the vacuole
S000036884 CDS YLR246W 12 627120 628199 W 2004-02-05 1996-07-31
S000006643 tRNA tL(CAA)L chromosome 12 L000003648 12 628385 628499 W 2004-02-05 2000-05-19 tRNA-Leu
S000033796 intron tL(CAA)L 12 628423 628455 W 2004-02-05 2000-05-19
S000033794 noncoding_exon tL(CAA)L 12 628385 628422 W 2004-02-05 2000-05-19
S000033795 noncoding_exon tL(CAA)L 12 628456 628499 W 2004-02-05 2000-05-19
S000004237 ORF Verified YLR247C IRC20 chromosome 12 12 633356 628686 C 2004-02-05 1996-07-31 Putative helicase; localizes to the mitochondrion and the nucleus; YLR247C is not an essential gene; null mutant displays increased levels of spontaneous Rad52p foci
S000036895 CDS YLR247C 12 633356 628686 C 2004-02-05 1996-07-31
S000004238 ORF Verified YLR248W RCK2 CMK3|CLK1 chromosome 12 L000001593 12 634254 636086 W 2004-02-05 1996-07-31 Protein kinase involved in the response to oxidative and osmotic stress; identified as suppressor of S. pombe cell cycle checkpoint mutations
S000037704 CDS YLR248W 12 634254 636086 W 2004-02-05 1996-07-31
S000004239 ORF Verified YLR249W YEF3 TEF3 chromosome 12 L000002505 12 636782 639916 W 2004-02-05 1996-07-31 Translational elongation factor 3, stimulates the binding of aminoacyl-tRNA (AA-tRNA) to ribosomes by releasing EF-1 alpha from the ribosomal complex; contains two ABC cassettes; binds and hydrolyses ATP
S000037766 CDS YLR249W 12 636782 639916 W 2004-02-05 1996-07-31
S000004240 ORF Verified YLR250W SSP120 chromosome 12 L000002091 12 640319 641023 W 2004-02-05 1996-07-31 Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern
S000030689 CDS YLR250W 12 640319 641023 W 2004-02-05 1996-07-31
S000004241 ORF Verified YLR251W SYM1 chromosome 12 12 641466 642059 W 2004-02-05 1996-07-31 Protein required for ethanol metabolism; induced by heat shock and localized to the inner mitochondrial membrane; homologous to mammalian peroxisomal membrane protein Mpv17
S000030794 CDS YLR251W 12 641466 642059 W 2004-02-05 1996-07-31
S000004242 ORF Dubious YLR252W chromosome 12 12 641959 642264 W 2004-02-05 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on experimental and comparative sequence data; partially overlaps the verified gene SYM1, a mitochondrial protein involved in ethanol metabolism
S000030890 CDS YLR252W 12 641959 642264 W 2004-02-05 1996-07-31
S000004243 ORF Uncharacterized YLR253W chromosome 12 12 642629 644338 W 2004-02-05 1996-07-31 Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; transcription is periodic during the metabolic cycle; YLR253W is not an essential gene
S000031890 CDS YLR253W 12 642629 644338 W 2004-02-05 1996-07-31
S000004244 ORF Verified YLR254C NDL1 chromosome 12 12 644975 644406 C 2004-02-05 1996-07-31 Homolog of nuclear distribution factor NudE, NUDEL; interacts with Pac1p and regulates dynein targeting to microtubule plus ends
S000031972 CDS YLR254C 12 644975 644406 C 2004-02-05 1996-07-31
S000004245 ORF Dubious YLR255C chromosome 12 12 645955 645602 C 2004-02-05 1996-07-31 Dubious ORF unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000032077 CDS YLR255C 12 645955 645602 C 2004-02-05 1996-07-31
S000004246 ORF Verified YLR256W HAP1 CYP1 chromosome 12 L000002665 12 646417 650925 W 2004-02-05 1996-07-31 Zinc finger transcription factor involved in the complex regulation of gene expression in response to levels of heme and oxygen; the S288C sequence differs from other strain backgrounds due to a Ty1 insertion in the carboxy terminus
S000033058 CDS YLR256W 12 646417 650925 W 2004-02-05 1996-07-31
S000007099 retrotransposon YLRWTy1-3 chromosome 12 12 650826 656745 W 2004-02-05 2000-05-19 Long Terminal Repeat (LTR) retrotransposon of the Copia (Pseudoviridae) group; contains co-transcribed genes TYA Gag and TYB Pol, encoding proteins involved in structure and function of virus-like particles, flanked by two direct repeats
S000007088 long_terminal_repeat YLRWdelta13 chromosome 12 12 650826 651159 W 2004-02-05 2000-05-19 Ty1 LTR
S000007377 transposable_element_gene YLR256W-A chromosome 12 12 651119 652441 W 2004-02-05 1999-07-17 Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag
S000035661 CDS YLR256W-A 12 651119 652441 W 2004-02-05 1999-07-17
S000007089 long_terminal_repeat YLRWdelta14 chromosome 12 12 656412 656745 W 2004-02-05 2000-05-19 Ty1 LTR
S000006517 tRNA tA(AGC)L chromosome 12 L000003660 12 657008 656936 C 2004-02-05 2000-05-19 tRNA-Ala (Ala1), one of 11 nuclear tRNA genes containing the tDNA-anticodon AGC (converted to IGC in the mature tRNA), decodes GCU and GCC codons into alanine, one of 16 nuclear tRNAs for alanine
S000032303 noncoding_exon tA(AGC)L 12 657008 656936 C 2004-02-05 2000-05-19
S000007096 long_terminal_repeat YLRWsigma3 chromosome 12 12 657024 657367 W 2004-02-05 2000-05-19 Ty3 LTR
S000007090 long_terminal_repeat YLRWdelta15 chromosome 12 12 657451 657769 W 2004-02-05 2000-05-19 Ty1 LTR
S000004247 ORF Uncharacterized YLR257W chromosome 12 12 658828 659793 W 2004-02-05 1996-07-31 Putative protein of unknown function
S000033141 CDS YLR257W 12 658828 659793 W 2004-02-05 1996-07-31
S000118478 ARS ARS1220 ARSXII-660 chromosome 12 12 659826 660074 2006-08-30 2006-08-30 Autonomously Replicating Sequence
S000004248 ORF Verified YLR258W GSY2 chromosome 12 L000000740 12 660718 662835 W 2004-02-05 1996-07-31 Glycogen synthase, similar to Gsy1p; expression induced by glucose limitation, nitrogen starvation, heat shock, and stationary phase; activity regulated by cAMP-dependent, Snf1p and Pho85p kinases as well as by the Gac1p-Glc7p phosphatase
S000033909 CDS YLR258W 12 660718 662835 W 2004-02-05 1996-07-31
S000004249 ORF Verified YLR259C HSP60 MNA2|MIF4|CPN60 chromosome 12 L000000819 12 665004 663286 C 2004-02-05 1996-07-31 Tetradecameric mitochondrial chaperonin required for ATP-dependent folding of precursor polypeptides and complex assembly; prevents aggregation and mediates protein refolding after heat shock; role in mtDNA transmission; phosphorylated
S000033960 CDS YLR259C 12 665004 663286 C 2004-02-05 1996-07-31
S000004250 ORF Verified YLR260W LCB5 chromosome 12 L000004329 12 665846 667909 W 2004-02-05 1996-07-31 Minor sphingoid long-chain base kinase, paralog of Lcb4p responsible for few percent of the total activity, possibly involved in synthesis of long-chain base phosphates, which function as signaling molecules
S000035015 CDS YLR260W 12 665846 667909 W 2004-02-05 1996-07-31
S000004251 ORF Dubious YLR261C VPS63 chromosome 12 12 668565 668239 C 2004-02-05 1996-07-31 Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene YPT6; deletion causes a vacuolar protein sorting defect
S000035062 CDS YLR261C 12 668565 668239 C 2004-02-05 1996-07-31
S000004252 ORF Verified YLR262C YPT6 chromosome 12 L000002896|L000002948 12 668893 668246 C 2004-02-05 1996-07-31 GTPase, Ras-like GTP binding protein involved in the secretory pathway, required for fusion of endosome-derived vesicles with the late Golgi, maturation of the vacuolar carboxypeptidase Y; has similarity to the human GTPase, Rab6
S000035164 CDS YLR262C 12 668893 668246 C 2004-02-05 1996-07-31
S000007246 ORF Verified YLR262C-A TMA7 RBF7 chromosome 12 12 669664 669470 C 2004-02-05 1999-07-17 Protein of unknown that associates with ribosomes; null mutant exhibits translation defects, altered polyribosome profiles, and resistance to the translation inhibitor anisomcyin
S000036510 CDS YLR262C-A 12 669664 669470 C 2004-02-05 1999-07-17
S000004253 ORF Verified YLR263W RED1 chromosome 12 L000001608 12 670342 672825 W 2004-02-05 1996-07-31 Protein component of the axial elements of the synaptonemal complex, involved in chromosome segregation during the first meiotic division; interacts with Hop1p; required for wild-type levels of Mek1p kinase activity
S000036094 CDS YLR263W 12 670342 672825 W 2004-02-05 1996-07-31
S000004254 ORF Verified YLR264W RPS28B RPS33B chromosome 12 L000002744 12 673133 673336 W 2004-02-05 1996-07-31 Protein component of the small (40S) ribosomal subunit; nearly identical to Rps28Ap and has similarity to rat S28 ribosomal protein
S000036202 CDS YLR264W 12 673133 673336 W 2004-02-05 1996-07-31
S000028808 ORF Uncharacterized YLR264C-A chromosome 12 12 673946 673830 C 2004-02-05 2003-07-29 Putative protein of unknown function
S000033593 CDS YLR264C-A 12 673946 673830 C 2004-02-05 2003-07-29
S000004255 ORF Verified YLR265C NEJ1 LIF2 chromosome 12 12 675457 674429 C 2004-02-05 1996-07-31 Protein involved in regulation of nonhomologous end joining; interacts with DNA ligase IV components Dnl4p and Lif1p; repressed by MAT heterozygosity; regulates cellular distribution of Lif1p
S000036242 CDS YLR265C 12 675457 674429 C 2004-02-05 1996-07-31
S000004256 ORF Verified YLR266C PDR8 chromosome 12 12 677726 675621 C 2004-02-05 1996-07-31 Transcription factor; targets include ATP-binding cassette (ABC) transporters, major facilitator superfamily transporters, and other genes involved in the pleiotropic drug resistance (PDR) phenomenon
S000031731 CDS YLR266C 12 677726 675621 C 2004-02-05 1996-07-31
S000004257 ORF Uncharacterized YLR267W BOP2 chromosome 12 L000004722 12 678214 679926 W 2004-02-05 1996-07-31 Protein of unknown function
S000031962 CDS YLR267W 12 678214 679926 W 2004-02-05 1996-07-31
S000004258 ORF Verified YLR268W SEC22 TSL26|SLY2 chromosome 12 L000001845 12 680202 680846 W 2004-02-05 1996-07-31 R-SNARE protein; assembles into SNARE complex with Bet1p, Bos1p and Sed5p; cycles between the ER and Golgi complex; involved in anterograde and retrograde transport between the ER and Golgi; synaptobrevin homolog
S000037429 CDS YLR268W 12 680202 680846 W 2004-02-05 1996-07-31
S000004260 ORF Verified YLR270W DCS1 DcpS chromosome 12 12 681188 682240 W 2004-02-05 1996-07-31 Non-essential hydrolase involved in mRNA decapping, may function in a feedback mechanism to regulate deadenylation, contains pyrophosphatase activity and a HIT (histidine triad) motif; interacts with neutral trehalase Nth1p
S000037138 CDS YLR270W 12 681188 682240 W 2004-02-05 1996-07-31
S000004259 ORF Dubious YLR269C chromosome 12 12 681218 680868 C 2004-02-05 1996-07-31 Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000037460 CDS YLR269C 12 681218 680868 C 2004-02-05 1996-07-31
S000004261 ORF Uncharacterized YLR271W chromosome 12 12 682739 683563 W 2004-02-05 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus and is induced in response to the DNA-damaging agent MMS
S000037234 CDS YLR271W 12 682739 683563 W 2004-02-05 1996-07-31
S000004262 ORF Verified YLR272C YCS4 LOC7 chromosome 12 12 687204 683674 C 2004-02-05 1996-07-31 Subunit of the condensin complex; required for establishment and maintenance of chromosome condensation, chromosome segregation, chromatin binding of condensin, tRNA gene clustering at the nucleolus, and silencing at the mating type locus
S000037272 CDS YLR272C 12 687204 683674 C 2004-02-05 1996-07-31
S000006762 tRNA tV(AAC)L chromosome 12 L000003659 12 687934 687861 C 2004-02-05 2000-05-19 tRNA-Val
S000032966 noncoding_exon tV(AAC)L 12 687934 687861 C 2004-02-05 2000-05-19
S000007071 long_terminal_repeat YLRCdelta16 chromosome 12 12 688370 688121 C 2004-02-05 2000-05-19 Ty1 LTR
S000007091 long_terminal_repeat YLRWdelta17 chromosome 12 12 688371 688666 W 2004-02-05 2000-05-19 Ty1 LTR
S000004263 ORF Verified YLR273C PIG1 chromosome 12 L000001436 12 691031 689085 C 2004-02-05 1996-07-31 Putative targeting subunit for the type-1 protein phosphatase Glc7p that tethers it to the Gsy2p glycogen synthase
S000037347 CDS YLR273C 12 691031 689085 C 2004-02-05 1996-07-31
S000004264 ORF Verified YLR274W MCM5 CDC46|BOB1 chromosome 12 L000000279 12 691557 693884 W 2004-02-05 1996-07-31 Component of the hexameric MCM complex, which is important for priming origins of DNA replication in G1 and becomes an active ATP-dependent helicase that promotes DNA melting and elongation when activated by Cdc7p-Dbf4p in S-phase
S000030019 CDS YLR274W 12 691557 693884 W 2004-02-05 1996-07-31
S000004265 ORF Verified YLR275W SMD2 chromosome 12 L000004145 12 694380 694802 W 2004-02-05 1996-07-31 Core Sm protein Sm D2; part of heteroheptameric complex (with Smb1p, Smd1p, Smd3p, Sme1p, Smx3p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm D2
S000030096 CDS YLR275W 12 694380 694384 W 2004-02-05 1996-07-31
S000030097 CDS YLR275W 12 694475 694802 W 2004-02-05 1996-07-31
S000030098 intron YLR275W 12 694385 694474 W 2004-02-05 1996-07-31
S000004266 ORF Verified YLR276C DBP9 chromosome 12 L000004249 12 696832 695048 C 2004-02-05 1996-07-31 ATP-dependent RNA helicase of the DEAD-box family involved in biogenesis of the 60S ribosomal subunit
S000030144 CDS YLR276C 12 696832 695048 C 2004-02-05 1996-07-31
S000004267 ORF Verified YLR277C YSH1 BRR5 chromosome 12 L000003344 12 699497 697158 C 2004-02-05 1996-07-31 Putative endoribonuclease, subunit of the mRNA cleavage and polyadenylation specificity complex; required for 3' processing, splicing, and transcriptional termination of mRNAs and snoRNAs
S000030344 CDS YLR277C 12 699497 697158 C 2004-02-05 1996-07-31
S000004268 ORF Uncharacterized YLR278C chromosome 12 12 704026 700001 C 2004-02-05 1996-07-31 Zinc-cluster protein; GFP-fusion protein localizes to the nucleus; mutant shows moderate growth defect on caffeine; has a prion-domain like fragment that increases frequency of [URE3]; YLR278C is not an essential gene
S000033636 CDS YLR278C 12 704026 700001 C 2004-02-05 1996-07-31
S000004269 ORF Dubious YLR279W chromosome 12 12 704311 704700 W 2004-02-05 1996-07-31 Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000033857 CDS YLR279W 12 704311 704700 W 2004-02-05 1996-07-31
S000004270 ORF Dubious YLR280C chromosome 12 12 704835 704485 C 2004-02-05 1996-07-31 Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000033385 CDS YLR280C 12 704835 704485 C 2004-02-05 1996-07-31
S000004271 ORF Uncharacterized YLR281C chromosome 12 12 704962 704495 C 2004-02-05 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to mitochondria; YLR281C is not an essential gene
S000033456 CDS YLR281C 12 704962 704495 C 2004-02-05 1996-07-31
S000004273 ORF Uncharacterized YLR283W chromosome 12 12 705188 706132 W 2004-02-05 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to mitochondria; YLR283W is not an essential gene
S000034433 CDS YLR283W 12 705188 706132 W 2004-02-05 1996-07-31
S000004272 ORF Dubious YLR282C chromosome 12 12 705414 705073 C 2004-02-05 1996-07-31 Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data; deletion mutation confers an increase in Ty1 transposition
S000033516 CDS YLR282C 12 705414 705073 C 2004-02-05 1996-07-31
S000004274 ORF Verified YLR284C ECI1 chromosome 12 L000004206 12 707042 706200 C 2004-02-05 1996-07-31 Peroxisomal delta3,delta2-enoyl-CoA isomerase, hexameric protein that converts 3-hexenoyl-CoA to trans-2-hexenoyl-CoA, essential for the beta-oxidation of unsaturated fatty acids, oleate-induced
S000034471 CDS YLR284C 12 707042 706200 C 2004-02-05 1996-07-31
S000004275 ORF Verified YLR285W NNT1 chromosome 12 12 707362 708147 W 2004-02-05 1996-07-31 Putative nicotinamide N-methyltransferase, has a role in rDNA silencing and in lifespan determination
S000034643 CDS YLR285W 12 707362 708147 W 2004-02-05 1996-07-31
S000028569 ORF Uncharacterized YLR285C-A chromosome 12 12 708340 708170 C 2004-02-05 2003-07-29 Putative protein of unknown function; identified by fungal homology and RT-PCR
S000031275 CDS YLR285C-A 12 708340 708170 C 2004-02-05 2003-07-29
S000028679 ORF Dubious YLR286W-A chromosome 12 12 708564 708698 W 2004-02-05 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene CTS1
S000032537 CDS YLR286W-A 12 708564 708698 W 2004-02-05 2003-07-29
S000004276 ORF Verified YLR286C CTS1 chromosome 12 L000000434 12 710138 708450 C 2004-02-05 1996-07-31 Endochitinase, required for cell separation after mitosis; transcriptional activation during the G1 phase of the cell cycle is mediated by transcription factor Ace2p
S000034680 CDS YLR286C 12 710138 708450 C 2004-02-05 1996-07-31
S000004277 ORF Uncharacterized YLR287C chromosome 12 12 712060 710993 C 2004-02-05 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLR287C is not an essential gene
S000035680 CDS YLR287C 12 712060 710993 C 2004-02-05 1996-07-31
S000004278 ORF Verified YLR287C-A RPS30A chromosome 12 L000003183 12 713160 712539 C 2004-02-05 1996-07-31 Protein component of the small (40S) ribosomal subunit; nearly identical to Rps30Bp and has similarity to rat S30 ribosomal protein
S000030932 CDS YLR287C-A 12 712727 712539 C 2004-02-05 1996-07-31
S000030931 CDS YLR287C-A 12 713160 713158 C 2004-02-05 1996-07-31
S000030933 intron YLR287C-A 12 713157 712728 C 2004-02-05 1996-07-31
S000004279 ORF Verified YLR288C MEC3 PSO9|PIP3 chromosome 12 L000002907 12 714906 713482 C 2004-02-05 1996-07-31 DNA damage and meiotic pachytene checkpoint protein; subunit of a heterotrimeric complex (Rad17p-Mec3p-Ddc1p) that forms a sliding clamp, loaded onto partial duplex DNA by a clamp loader complex; homolog of human and S. pombe Hus1
S000035804 CDS YLR288C 12 714906 713482 C 2004-02-05 1996-07-31
S000004280 ORF Verified YLR289W GUF1 chromosome 12 L000002749 12 715091 717028 W 2004-02-05 1996-07-31 Mitochondrial matrix GTPase that associates with mitochondrial ribosomes; important for translation under temperature and nutrient stress; may have a role in translational fidelity; similar to bacterial LepA elongation factor
S000037787 CDS YLR289W 12 715091 717028 W 2004-02-05 1996-07-31
S000004281 ORF Uncharacterized YLR290C chromosome 12 12 717980 717147 C 2004-02-05 1996-07-31 Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YLR290C is not an essential gene
S000036802 CDS YLR290C 12 717980 717147 C 2004-02-05 1996-07-31
S000004282 ORF Verified YLR291C GCD7 chromosome 12 L000000675 12 719464 718319 C 2004-02-05 1996-07-31 Beta subunit of the translation initiation factor eIF2B, the guanine-nucleotide exchange factor for eIF2; activity subsequently regulated by phosphorylated eIF2; first identified as a negative regulator of GCN4 expression
S000036871 CDS YLR291C 12 719464 718319 C 2004-02-05 1996-07-31
S000004283 ORF Verified YLR292C SEC72 SIM2|SEC67 chromosome 12 L000001857 12 720372 719791 C 2004-02-05 1996-07-31 Non-essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p); with Sec61 complex, Kar2p/BiP and Lhs1p forms a channel competent for SRP-dependent and post-translational SRP-independent protein targeting and import into the ER
S000037611 CDS YLR292C 12 720372 719791 C 2004-02-05 1996-07-31
S000130184 ARS ARS1221 chromosome 12 12 720786 721420 2009-05-08 2009-05-08 Putative replication origin, identified in multiple array studies, not yet confirmed by plasmid-based assay
S000004284 ORF Verified YLR293C GSP1 CST17|CNR1 chromosome 12 L000000736 12 721432 720773 C 2004-02-05 1996-07-31 Ran GTPase, GTP binding protein (mammalian Ranp homolog) involved in the maintenance of nuclear organization, RNA processing and transport; regulated by Srm1p, Rna1p, Yrb1p, Yrb2p, Yrp4p, Yrb30p, Cse1p and Kap95p; yeast Gsp2p homolog
S000037671 CDS YLR293C 12 721432 720773 C 2004-02-05 1996-07-31
S000004285 ORF Dubious YLR294C chromosome 12 12 722032 721703 C 2004-02-05 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the verified gene ATP14
S000037718 CDS YLR294C 12 722032 721703 C 2004-02-05 1996-07-31
S000004286 ORF Verified YLR295C ATP14 chromosome 12 L000003379 12 722375 722001 C 2004-02-05 1996-07-31 Subunit h of the F0 sector of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis
S000037778 CDS YLR295C 12 722375 722001 C 2004-02-05 1996-07-31
S000004287 ORF Dubious YLR296W chromosome 12 12 722980 723306 W 2004-02-05 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000030715 CDS YLR296W 12 722980 723306 W 2004-02-05 1996-07-31
S000004288 ORF Uncharacterized YLR297W chromosome 12 12 724046 724435 W 2004-02-05 1996-07-31 Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole; YLR297W is not an essential gene; induced by treatment with 8-methoxypsoralen and UVA irradiation
S000030831 CDS YLR297W 12 724046 724435 W 2004-02-05 1996-07-31
S000004289 ORF Verified YLR298C YHC1 chromosome 12 L000004161 12 725418 724723 C 2004-02-05 1996-07-31 Component of the U1 snRNP complex required for pre-mRNA splicing; putative ortholog of human U1C protein, which is involved in formation of a complex between U1 snRNP and the pre-mRNA 5' splice site
S000030863 CDS YLR298C 12 725418 724723 C 2004-02-05 1996-07-31
S000004290 ORF Verified YLR299W ECM38 CIS2 chromosome 12 L000003905 12 726071 728053 W 2004-02-05 1996-07-31 Gamma-glutamyltranspeptidase, major glutathione-degrading enzyme; involved in detoxification of electrophilic xenobiotics; expression induced mainly by nitrogen starvation
S000031951 CDS YLR299W 12 726071 728053 W 2004-02-05 1996-07-31
S000028680 ORF Dubious YLR299C-A chromosome 12 12 728005 727913 C 2004-02-05 2003-07-29 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; overlaps the verified gene ECM38
S000032551 CDS YLR299C-A 12 728005 727913 C 2004-02-05 2003-07-29
S000004291 ORF Verified YLR300W EXG1 BGL1 chromosome 12 L000000592 12 728957 730303 W 206 2004-02-05 1996-07-31 Major exo-1,3-beta-glucanase of the cell wall, involved in cell wall beta-glucan assembly; exists as three differentially glycosylated isoenzymes
S000030080 CDS YLR300W 12 728957 730303 W 2004-02-05 1996-07-31
S000004292 ORF Uncharacterized YLR301W chromosome 12 12 730827 731561 W 2004-02-05 1996-07-31 Protein of unknown function that interacts with Sec72p
S000030226 CDS YLR301W 12 730827 731561 W 2004-02-05 1996-07-31
S000007072 long_terminal_repeat YLRCdelta18 chromosome 12 12 732002 731670 C 2004-02-05 2000-05-19 Ty2 LTR
S000006656 tRNA tL(UAG)L2 chromosome 12 L000003649 12 732092 732192 W 2004-02-05 2000-05-19 tRNA-Leu
S000035006 intron tL(UAG)L2 12 732130 732148 W 2004-02-05 2000-05-19
S000035004 noncoding_exon tL(UAG)L2 12 732092 732129 W 2004-02-05 2000-05-19
S000035005 noncoding_exon tL(UAG)L2 12 732149 732192 W 2004-02-05 2000-05-19
S000004294 ORF Verified YLR303W MET17 MET25|MET15 chromosome 12 L000001091|L000001088 12 732544 733878 W 2004-02-05 1996-07-31 Methionine and cysteine synthase (O-acetyl homoserine-O-acetyl serine sulfhydrylase), required for sulfur amino acid synthesis
S000030497 CDS YLR303W 12 732544 733878 W 2004-02-05 1996-07-31
S000004293 ORF Dubious YLR302C chromosome 12 12 732555 732193 C 2004-02-05 1996-07-31 Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data
S000030295 CDS YLR302C 12 732555 732193 C 2004-02-05 1996-07-31
S000007073 long_terminal_repeat YLRCdelta19 chromosome 12 12 734673 734503 C 2004-02-05 2000-05-19 Ty1 LTR
S000006607 tRNA tI(AAU)L1 chromosome 12 L000003650 12 734804 734877 W 2004-02-05 2000-05-19 tRNA-Ile
S000033931 noncoding_exon tI(AAU)L1 12 734804 734877 W 2004-02-05 2000-05-19
S000004295 ORF Verified YLR304C ACO1 GLU1 chromosome 12 L000000022 12 737550 735214 C 2004-02-05 1996-07-31 Aconitase, required for the tricarboxylic acid (TCA) cycle and also independently required for mitochondrial genome maintenance; phosphorylated; component of the mitochondrial nucleoid; mutation leads to glutamate auxotrophy
S000031331 CDS YLR304C 12 737550 735214 C 2004-02-05 1996-07-31
S000004296 ORF Verified YLR305C STT4 chromosome 12 L000002137 12 743865 738163 C 2004-02-05 1996-07-31 Phosphatidylinositol-4-kinase that functions in the Pkc1p protein kinase pathway; required for normal vacuole morphology, cell wall integrity, and actin cytoskeleton organization
S000031384 CDS YLR305C 12 743865 738163 C 2004-02-05 1996-07-31
S000004297 ORF Verified YLR306W UBC12 chromosome 12 L000003386 12 744153 744853 W 2004-02-05 1996-07-31 Enzyme that mediates the conjugation of Rub1p, a ubiquitin-like protein, to other proteins; related to E2 ubiquitin-conjugating enzymes
S000031518 CDS YLR306W 12 744153 744155 W 2004-02-05 1996-07-31
S000031519 CDS YLR306W 12 744290 744853 W 2004-02-05 1996-07-31
S000031520 intron YLR306W 12 744156 744289 W 2004-02-05 1996-07-31
S000118479 ARS ARS1223 ARSXII-745 chromosome 12 12 744945 745181 2006-08-30 2006-08-30 Autonomously Replicating Sequence; replication capacity dependent upon Sum1p
S000004298 ORF Verified YLR307W CDA1 chromosome 12 L000003112 12 745622 746527 W 2004-02-05 1996-07-31 Chitin deacetylase, together with Cda2p involved in the biosynthesis ascospore wall component, chitosan; required for proper rigidity of the ascospore wall
S000031600 CDS YLR307W 12 745622 746527 W 2004-02-05 1996-07-31
S000028525 ORF Uncharacterized YLR307C-A chromosome 12 12 747113 746850 C 2004-02-05 2003-07-29 Putative protein of unknown function
S000030327 CDS YLR307C-A 12 747113 746850 C 2004-02-05 2003-07-29
S000004299 ORF Verified YLR308W CDA2 chromosome 12 L000003113 12 747939 748877 W 2004-02-05 1996-07-31 Chitin deacetylase, together with Cda1p involved in the biosynthesis ascospore wall component, chitosan; required for proper rigidity of the ascospore wall
S000032597 CDS YLR308W 12 747939 748877 W 2004-02-05 1996-07-31
S000004300 ORF Verified YLR309C IMH1 SYS3 chromosome 12 L000003981 12 751771 749036 C 2004-02-05 1996-07-31 Protein involved in vesicular transport, mediates transport between an endosomal compartment and the Golgi, contains a Golgi-localization (GRIP) domain that interacts with activated Arl1p-GTP to localize Imh1p to the Golgi
S000032653 CDS YLR309C 12 751771 749036 C 2004-02-05 1996-07-31
S000004301 ORF Verified YLR310C CDC25 CDC25'|CTN1 chromosome 12 L000000264|L000000263 12 756995 752226 C 213 2004-02-05 1996-07-31 Membrane bound guanine nucleotide exchange factor (GEF or GDP-release factor); indirectly regulates adenylate cyclase through activation of Ras1p and Ras2p by stimulating the exchange of GDP for GTP; required for progression through G1
S000032496 CDS YLR310C 12 756995 752226 C 2004-02-05 1996-07-31
S000004302 ORF Dubious YLR311C chromosome 12 12 757614 757267 C 2004-02-05 1996-07-31 Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data
S000034499 CDS YLR311C 12 757614 757267 C 2004-02-05 1996-07-31
S000004303 ORF Uncharacterized YLR312C QNQ1 chromosome 12 12 758835 757639 C 2004-02-05 1996-07-31 Putative protein of unknown function
S000034606 CDS YLR312C 12 758835 757639 C 2004-02-05 1996-07-31
S000004304 ORF Verified YLR312W-A MRPL15 chromosome 12 L000002688 12 759482 760243 W 2006-10-03 2001-06-12|1997-07-01|2006-10-03 Mitochondrial ribosomal protein of the large subunit
S000037404 CDS YLR312W-A 12 759482 760243 W 2006-10-03 1997-07-01|2006-10-03
S000004305 ORF Verified YLR313C SPH1 YLR312C-B chromosome 12 L000004149 12 762342 760357 C 2004-02-05 2004-02-04|1996-07-31 Protein involved in shmoo formation and bipolar bud site selection; homologous to Spa2p, localizes to sites of polarized growth in a cell cycle dependent- and Spa2p-dependent manner, interacts with MAPKKs Mkk1p, Mkk2p, and Ste7p
S000034673 CDS YLR313C 12 762342 760357 C 2004-02-05 2004-02-04|1996-07-31
S000004306 ORF Verified YLR314C CDC3 chromosome 12 L000000243 12 764137 762575 C 215 2004-02-05 1996-07-31 Component of the septin ring of the mother-bud neck that is required for cytokinesis; septins recruit proteins to the neck and can act as a barrier to diffusion at the membrane, and they comprise the 10nm filaments seen with EM
S000034752 CDS YLR314C 12 764137 762575 C 2004-02-05 1996-07-31
S000004307 ORF Verified YLR315W NKP2 chromosome 12 12 764808 765269 W 2004-02-05 1996-07-31 Non-essential kinetochore protein, subunit of the Ctf19 central kinetochore complex (Ctf19p-Mcm21p-Okp1p-Mcm22p-Mcm16p-Ctf3p-Chl4p-Mcm19p-Nkp1p-Nkp2p-Ame1p-Mtw1p)
S000035712 CDS YLR315W 12 764808 765269 W 2004-02-05 1996-07-31
S000004309 ORF Dubious YLR317W chromosome 12 12 765655 766089 W 2004-02-05 1996-07-31 Dubious open reading frame; may be part of a bicistronic transcript with NKP2/YLR315W; overlaps the verified ORF TAD3/YLR316C
S000035934 CDS YLR317W 12 765655 766089 W 2004-02-05 1996-07-31
S000004308 ORF Verified YLR316C TAD3 chromosome 12 S000007486 12 766358 765266 C 2004-02-05 2000-07-22|1996-07-31 Subunit of tRNA-specific adenosine-34 deaminase, forms a heterodimer with Tad2p that converts adenosine to inosine at the wobble position of several tRNAs
S000035749 CDS YLR316C 12 766073 765266 C 2004-02-05 2000-07-22|1996-07-31
S000035748 CDS YLR316C 12 766181 766130 C 2004-02-05 2000-07-22
S000035747 CDS YLR316C 12 766358 766250 C 2004-02-05 2000-07-22
S000035751 intron YLR316C 12 766129 766074 C 2004-02-05 2000-07-22
S000035750 intron YLR316C 12 766249 766182 C 2004-02-05 2000-07-22
S000004310 ORF Verified YLR318W EST2 TERT chromosome 12 L000003504 12 766542 769196 W 2004-02-05 1996-07-31 Reverse transcriptase subunit of the telomerase holoenzyme, essential for telomerase core catalytic activity, involved in other aspects of telomerase assembly and function; mutations in human homolog are associated with aplastic anemia
S000036808 CDS YLR318W 12 766542 769196 W 2004-02-05 1996-07-31
S000004311 ORF Verified YLR319C BUD6 AIP3 chromosome 12 L000000071|L000002602 12 771684 769318 C 221 2004-02-05 1996-07-31 Actin- and formin-interacting protein, involved in actin cable nucleation and polarized cell growth; isolated as bipolar budding mutant; potential Cdc28p substrate
S000036838 CDS YLR319C 12 771684 769318 C 2004-02-05 1996-07-31
S000004312 ORF Verified YLR320W MMS22 SLM2 chromosome 12 12 771940 776304 W 2004-02-05 1996-07-31 Protein that acts with Mms1p in a repair pathway that may be involved in resolving replication intermediates or preventing the damage caused by blocked replication forks; required for accurate meiotic chromosome segregation
S000036604 CDS YLR320W 12 771940 776304 W 2004-02-05 1996-07-31
S000004314 ORF Dubious YLR322W VPS65 chromosome 12 12 777628 777942 W 2004-02-05 1996-07-31 Dubious open reading frame, unlikely to encode a protein; not conserved in closely related Saccharomyces species; 75% of ORF overlaps the verified gene SFH1; deletion causes a vacuolar protein sorting defect and blocks anaerobic growth
S000036774 CDS YLR322W 12 777628 777942 W 2004-02-05 1996-07-31
S000004313 ORF Verified YLR321C SFH1 chromosome 12 L000003282 12 777864 776584 C 2004-02-05 1996-07-31 Component of the RSC chromatin remodeling complex; essential gene required for cell cycle progression and maintenance of proper ploidy; phosphorylated in the G1 phase of the cell cycle; Snf5p paralog
S000036636 CDS YLR321C 12 777864 776584 C 2004-02-05 1996-07-31
S000004315 ORF Verified YLR323C CWC24 chromosome 12 12 778952 778173 C 2004-02-05 1996-07-31 Essential protein, component of a complex containing Cef1p; has similarity to S. pombe Cwf24p
S000030574 CDS YLR323C 12 778952 778173 C 2004-02-05 1996-07-31
S000004316 ORF Ver